WERAM Information

Tag Content
WERAM ID WERAM-Pot-0014
Ensembl Protein ID POPTR_0001s36530.1
Gene Name POPTR_0001s36530g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0001s36530 POPTR_0001s36530.1 POPTR_0001s36530.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 1.80e-25 89.9 94 439
Organism Populus trichocarpa
Domain Profile
  Ac_Reader Bromodomain
           BROMO.txt   2 ehevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssv 71 
                          h+  ++F++pvdp  l+ipdY+++i +PmdL t+k++l ++ Y s++ef++D+rl f+Na+ yn++++ v
  POPTR_0001s36530.1  94 AHPAGWVFNKPVDPVaLKIPDYFTVISNPMDLGTVKSKLGKNFYASINEFAADIRLTFSNAMLYNPPSNNV 164
                         58999*************************************************************99876 PP
           BROMO.txt  28 ePmdLstikerleeg 42 
                          Pm++  +kerle++
  POPTR_0001s36530.1 425 DPMKMRQVKERLERR 439
                         69**********986 PP
Protein Sequence
(Fasta)		MIASGNVTMK KLTIKIASQR IQAIPGKKLL GAEQSCSASM GENHGSQMTK QKSVAPVSRK 60
RGPPEMIECQ QQKRQKMDRS VTQQCSSLLK SLMAHPAGWV FNKPVDPVAL KIPDYFTVIS 120
NPMDLGTVKS KLGKNFYASI NEFAADIRLT FSNAMLYNPP SNNVHRMAEE LNGIFETGWK 180
ALEENWNHEG PKFGSGKISS GCTTQIVNAK QNCLSMPSMH CTTLPKRSKT SKENVIRNLS 240
NASVITEAKP TKPAEMRKSL VPNSYKGADG GGRHACGSTN VKPLLIPVAS NCGKCGSNAC 300
RCSLQIDSYH TNSDISSERS SGRDQHACST DTSKLAKIMP ATQSSKSDPD SDEAVSALDD 360
ENICPGSQLT TPATDAASGE ELSSLFAVPL SPSKALRYAT IKHRFADTIL KAQNKAVLDN 420
GDKADPMKMR QVKERLERRQ QEEKARIEAQ IRAAEAATRR REETEMKRQR EREREAARIE 480
LQKMEKTTGI EQNLDILKEL EMLCGCSISL NYHFGSGRME VVKGEIGACI GSPLERLGLF 540
IKDDIEDVDE EFLDEDGVDE EFLDEDGEEG EILC 574
Nucleotide Sequence
(Fasta)		ATGATTGCTT CTGGGAATGT AACAATGAAG AAGTTAACGA TTAAGATCGC TTCACAAAGA 60
ATACAAGCTA TTCCTGGGAA AAAGTTGCTT GGTGCTGAAC AGAGTTGCAG CGCTTCTATG 120
GGTGAGAATC ATGGTTCTCA GATGACAAAA CAGAAATCTG TGGCCCCAGT TTCTAGGAAG 180
CGTGGACCAC CAGAGATGAT AGAGTGTCAA CAGCAGAAGA GGCAGAAGAT GGACCGTAGT 240
GTGACACAAC AGTGTTCTTC CCTTCTAAAA TCACTGATGG CTCATCCAGC TGGATGGGTT 300
TTTAATAAGC CTGTGGATCC AGTAGCACTG AAGATTCCTG ATTATTTCAC TGTTATATCA 360
AATCCCATGG ATTTAGGAAC AGTAAAGTCC AAGCTAGGAA AGAATTTTTA TGCTAGCATC 420
AATGAGTTTG CGGCTGATAT CAGACTGACC TTTTCAAATG CCATGCTGTA TAATCCTCCG 480
TCAAATAATG TCCATAGAAT GGCGGAGGAA CTAAATGGGA TTTTTGAGAC AGGGTGGAAA 540
GCTTTGGAGG AAAACTGGAA TCATGAAGGA CCAAAGTTTG GAAGTGGAAA GATTTCAAGT 600
GGATGCACAA CACAAATCGT CAATGCCAAA CAGAATTGTC TCAGTATGCC TTCTATGCAC 660
TGTACTACTC TGCCAAAGAG ATCAAAAACA TCCAAAGAAA ACGTGATAAG GAACTTGTCC 720
AATGCAAGTG TTATTACGGA AGCAAAGCCT ACTAAACCAG CAGAGATGCG CAAGTCCCTT 780
GTGCCAAACT CTTACAAAGG TGCTGATGGT GGCGGTAGAC ATGCATGTGG CTCTACAAAT 840
GTGAAGCCAT TGTTGATTCC AGTTGCTTCA AACTGTGGTA AATGTGGCAG TAATGCTTGC 900
CGATGCAGCC TCCAAATTGA TTCATACCAT ACAAACTCAG ATATATCTTC TGAGAGATCA 960
TCTGGGAGGG ATCAGCATGC ATGCAGCACT GATACCTCAA AACTGGCGAA AATCATGCCT 1020
GCCACACAAT CAAGCAAGTC AGATCCAGAT TCTGATGAGG CTGTTAGTGC TTTGGATGAT 1080
GAGAATATAT GTCCTGGTTC CCAGCTTACA ACTCCTGCAA CAGATGCAGC TTCTGGAGAA 1140
GAGTTGAGCT CTCTTTTTGC TGTACCATTG TCTCCAAGTA AAGCTCTTCG TTATGCAACA 1200
ATAAAGCATC GATTTGCAGA TACCATCTTA AAAGCTCAAA ATAAGGCAGT GCTTGATAAT 1260
GGTGATAAAG CTGATCCAAT GAAGATGCGG CAGGTGAAGG AAAGATTGGA AAGGCGGCAG 1320
CAGGAAGAGA AGGCTAGGAT TGAAGCACAA ATCCGAGCTG CCGAAGCTGC CACGCGAAGG 1380
AGGGAAGAGA CGGAAATGAA AAGGCAACGG GAGAGGGAAC GAGAAGCTGC TCGAATTGAA 1440
CTGCAAAAGA TGGAAAAAAC TACTGGGATC GAACAGAACC TAGATATTCT AAAAGAACTG 1500
GAGATGCTCT GTGGCTGTTC AATATCACTG AATTACCATT TTGGCAGTGG AAGGATGGAA 1560
GTGGTAAAGG GAGAAATCGG AGCTTGCATT GGTAGCCCAC TTGAGCGGTT GGGATTGTTT 1620
ATAAAAGATG ACATTGAAGA CGTGGATGAG GAGTTTCTGG ATGAAGATGG AGTGGATGAG 1680
GAGTTTCTGG ATGAAGATGG AGAGGAAGGA GAGATACTCT GTTAA 1726
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Thc-0078 EOY27851 Theobroma cacao 55 1e-123 441
WERAM-Prp-0052 EMJ13574 Prunus persica 51 5e-107 385
WERAM-Viv-0064 VIT_10s0003g02240.t01 Vitis vinifera 45 2e-97 354
WERAM-Glm-0192 GLYMA15G09620.1 Glycine max 46 2e-96 350
WERAM-Met-0039 AES64085 Medicago truncatula 42 4e-77 286
WERAM-Sol-0025 Solyc02g071510.2.1 Solanum lycopersicum 38 2e-67 254
WERAM-Arl-0014 Al_scaffold_0008_162 Arabidopsis lyrata 34 3e-56 217
WERAM-Brr-0114 Bra022044.1-P Brassica rapa 39 5e-54 209
WERAM-Sob-0081 Sb05g004810.1 Sorghum bicolor 38 1e-52 205
WERAM-Bro-0037 Bo2g130230.1 Brassica oleracea 37 1e-52 205
WERAM-Brd-0049 BRADI2G34827.1 Brachypodium distachyon 38 4e-52 203
WERAM-Art-0138 AT5G46550.1 Arabidopsis thaliana 36 1e-51 201
WERAM-Amt-0037 ERN14948 Amborella trichopoda 35 3e-49 194
WERAM-Sot-0022 PGSC0003DMT400018643 Solanum tuberosum 48 4e-49 193
WERAM-Mua-0077 GSMUA_Achr4P27780_001 Musa acuminata 66 4e-43 173
WERAM-Sei-0123 Si032535m Setaria italica 35 7e-42 169
WERAM-Orl-0088 KN539984.1_FGP007 Oryza longistaminata 46 1e-39 161
WERAM-Orm-0073 OMERI07G12670.1 Oryza meridionalis 45 2e-39 161
WERAM-Ors-0069 OS07T0507700-01 Oryza sativa 45 2e-39 161
WERAM-Orr-0078 ORUFI07G16200.1 Oryza rufipogon 50 2e-39 161
WERAM-Orgl-0073 OGLUM07G15360.1 Oryza glumaepatula 50 2e-39 161
WERAM-Org-0076 ORGLA07G0128000.1 Oryza glaberrima 50 2e-39 160
WERAM-Orb-0076 OBART07G15690.1 Oryza barthii 50 2e-39 160
WERAM-Ori-0085 BGIOSGA025772-PA Oryza indica 49 3e-39 160
WERAM-Orni-0076 ONIVA07G15550.1 Oryza nivara 50 3e-39 160
WERAM-Orbr-0085 OB07G21530.1 Oryza brachyantha 44 4e-39 160
WERAM-Orp-0073 OPUNC07G14460.1 Oryza punctata 50 5e-39 159
WERAM-Lep-0111 LPERR11G14070.1 Leersia perrieri 57 5e-38 156
WERAM-Zem-0111 GRMZM2G317652_P01 Zea mays 51 1e-34 145
WERAM-Tru-0072 TRIUR3_27288-P1 Triticum urartu 55 9e-32 135
WERAM-Tra-0252 Traes_6AS_5C6CBFDEF.2 Triticum aestivum 55 1e-31 135
WERAM-Aet-0072 EMT26738 Aegilops tauschii 55 2e-31 135
WERAM-Hov-0110 MLOC_78113.1 Hordeum vulgare 55 5e-31 133
WERAM-Sem-0092 EFJ05740 Selaginella moellendorffii 44 4e-28 124
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 45 5e-28 123
Created Date 25-Jun-2016