WERAM Information

Tag Content
WERAM ID WERAM-Sot-0103
Ensembl Protein ID PGSC0003DMT400095940
Gene Name PGSC0003DMG400045511
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PGSC0003DMG400045511 PGSC0003DMT400095940 PGSC0003DMT400095940
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 2.90e-10 41.5 149 202
Organism Solanum tuberosum
Domain Profile
  Ac_Reader Bromodomain
             BROMO.txt  18 eipdYydiikePmdLstikerleegnYss..peefvkDvrlifnNakaynenks 69 
                           e+ +Y++ ik++mdL+ i+++le+  Ys+  ++ f +D+ lifnNa  y++n++
  PGSC0003DMT400095940 149 EYLYYFKQIKQHMDLQIIQNKLEQDVYSNvkITSFFRDLLLIFNNAIVYYPNET 202
                           5669************************96678******************986 PP
Protein Sequence
(Fasta)		MEKVEEDMVL ACSVRRHGLE NWEMVAAEFS NSISKRCQCI LQFSSVECQI KYKSLKGRFK 60
SLYQINFTEE EDDESGFINL MADKLTKTYR DYWTEQVKLG DTPLQKKSPN IFKQEAEERI 120
KLNEEKGDDK SNEKMENINQ DFIKILNVEY LYYFKQIKQH MDLQIIQNKL EQDVYSNVKI 180
TSFFRDLLLI FNNAIVYYPN ETLQYFVTLE LRANIMREMG KKPLFCRKIV CGLPAAGNPM 240
LANQKLEKRA YKAHNKAQEG ESSVRRSVRV RNKLACEFKN DPDYDYKGQQ RRTTKKK 297
Nucleotide Sequence
(Fasta)		ATGGAGAAAG TTGAAGAAGA TATGGTGTTG GCATGTTCAG TGCGTCGCCA TGGATTAGAA 60
AATTGGGAAA TGGTGGCTGC CGAATTCTCA AATTCCATTT CCAAACGATG TCAATGTATT 120
CTTCAATTTT CCTCTGTAGA ATGTCAGATC AAGTACAAAA GTTTAAAAGG GCGTTTTAAG 180
AGTCTATATC AGATAAATTT TACTGAAGAA GAAGATGATG AGAGTGGATT CATAAATTTG 240
ATGGCAGATA AACTTACAAA GACTTATAGA GATTATTGGA CAGAGCAAGT CAAACTAGGG 300
GATACTCCAC TTCAGAAAAA ATCTCCGAAT ATTTTCAAAC AGGAAGCTGA AGAAAGAATA 360
AAGTTAAATG AGGAAAAAGG TGATGATAAA TCTAATGAAA AGATGGAGAA TATTAATCAA 420
GATTTCATAA AAATCCTTAA TGTGGAGTAT CTATATTATT TTAAACAAAT TAAGCAGCAT 480
ATGGATTTAC AGATTATTCA AAATAAGTTA GAACAAGATG TTTATTCGAA CGTGAAAATC 540
ACCAGCTTCT TTAGAGATCT CTTGTTGATT TTCAACAATG CCATTGTTTA TTACCCAAAT 600
GAAACTCTTC AGTATTTTGT CACGCTAGAA CTCAGAGCCA ATATTATGAG AGAAATGGGT 660
AAGAAACCCC TATTTTGTCG CAAAATTGTG TGTGGATTAC CTGCAGCAGG TAACCCAATG 720
TTGGCCAACC AAAAATTGGA GAAAAGGGCA TACAAGGCAC ATAACAAAGC TCAAGAAGGT 780
GAGTCATCAG TCAGGAGGAG TGTGAGAGTG AGAAATAAGC TGGCTTGCGA ATTCAAGAAC 840
GATCCGGATT ATGATTACAA AGGGCAACAA AGAAGAACGA CAAAGAAAAA ATAA 895
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sol-0002 Solyc01g006470.1.1 Solanum lycopersicum 57 1e-78 290
WERAM-Prp-0043 EMJ22101 Prunus persica 44 3e-14 76.3
WERAM-Bro-0065 Bo4g021680.1 Brassica oleracea 40 1e-11 68.2
WERAM-Brr-0020 Bra004831.1-P Brassica rapa 40 1e-11 67.8
WERAM-Viv-0085 VIT_13s0156g00340.t01 Vitis vinifera 39 2e-11 67.4
WERAM-Amt-0030 ERN11592 Amborella trichopoda 38 2e-11 66.6
WERAM-Arl-0077 fgenesh2_kg.4__ 2627__ AT2G44430.1 Arabidopsis lyrata 36 3e-11 66.6
WERAM-Pot-0002 POPTR_0001s05120.1 Populus trichocarpa 44 3e-11 66.2
WERAM-Thc-0062 EOY09477 Theobroma cacao 36 4e-11 65.9
WERAM-Art-0058 AT2G44430.1 Arabidopsis thaliana 34 6e-11 65.5
WERAM-Sob-0110 Sb07g027680.1 Sorghum bicolor 32 1e-10 64.3
WERAM-Zem-0018 GRMZM2G022499_P01 Zea mays 33 9e-09 58.2
WERAM-Tra-0071 Traes_2BS_832F28506.1 Triticum aestivum 33 1e-08 57.8
WERAM-Sei-0112 Si029233m Setaria italica 35 1e-08 57.8
WERAM-Mua-0126 GSMUA_Achr8P25530_001 Musa acuminata 35 1e-08 57.8
WERAM-Php-0024 PP1S148_42V6.1 Physcomitrella patens 41 1e-08 57.8
WERAM-Ors-0071 OS07T0565300-01 Oryza sativa 31 2e-08 57.4
WERAM-Orr-0081 ORUFI07G19680.1 Oryza rufipogon 31 2e-08 57.4
WERAM-Ori-0078 BGIOSGA024080-PA Oryza indica 31 2e-08 57.4
WERAM-Sem-0100 EFJ37441 Selaginella moellendorffii 38 2e-08 57.4
WERAM-Aet-0053 EMT30824 Aegilops tauschii 35 2e-08 57.0
WERAM-Tru-0068 TRIUR3_26205-P1 Triticum urartu 34 2e-08 57.0
WERAM-Glm-0167 GLYMA13G31800.1 Glycine max 41 2e-08 57.0
WERAM-Hov-0062 MLOC_56125.1 Hordeum vulgare 31 4e-08 56.2
WERAM-Orni-0041 ONIVA04G17620.1 Oryza nivara 30 8e-08 55.1
WERAM-Brd-0012 BRADI1G24580.1 Brachypodium distachyon 28 3e-07 53.1
WERAM-Met-0038 AES63730 Medicago truncatula 34 2e-06 50.1
Created Date 25-Jun-2016