WERAM Information

Tag Content
WERAM ID WERAM-Sol-0002
Ensembl Protein ID Solyc01g006470.1.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Solyc01g006470.1 Solyc01g006470.1.1 Solyc01g006470.1.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 3.50e-12 47 154 223
Organism Solanum lycopersicum
Domain Profile
  Ac_Reader Bromodomain
           BROMO.txt   4 evsepF..repvdpqleipdYydiikePmdLstikerleegnYss..peefvkDvrlifnNakaynenks 69 
                         +++  F  r p++++     Y++ ik++mdL+ i+++le+g Ys   +++f +D+ l+fnNa+ ++++++
  Solyc01g006470.1.1 154 KYCCLFesRLPSQEDNPNSRYTKQIKQHMDLQIIQNKLEQGVYSHmrLANFFRDLLLMFNNAMVFYPKDT 223
                         555566333333332334489***********************98899*****************9986 PP
Protein Sequence
(Fasta)		MEKLQVQDDL WLACSMRRHG LDKWEMVADE FSKIILNYRG CVLNISPVEC KIKYESLKKR 60
FQNLYQINFN EEADDESAFV KLMADLLKDT YKNILSEEFK LCDASAEKTL CNLCILEAEK 120
RIGDEEKGDD TSNDKMDNIH PDFIEVLDVL KSHKYCCLFE SRLPSQEDNP NSRYTKQIKQ 180
HMDLQIIQNK LEQGVYSHMR LANFFRDLLL MFNNAMVFYP KDTLQYPAAL ELKAIIVREM 240
GKKPLFRREI VLALPAIRNP MLAKQKLERK MRNKARGDGK TCAKRSVK 288
Nucleotide Sequence
(Fasta)		ATGGAGAAAC TTCAAGTCCA AGATGATCTT TGGCTTGCAT GTTCAATGAG AAGGCATGGA 60
TTAGACAAGT GGGAAATGGT GGCTGATGAA TTCTCCAAAA TCATTTTAAA TTATCGCGGA 120
TGTGTTCTGA ATATATCGCC CGTAGAATGT AAGATTAAGT ACGAAAGTCT CAAAAAACGT 180
TTTCAGAATT TGTACCAGAT AAATTTTAAT GAAGAAGCTG ATGATGAAAG TGCATTCGTA 240
AAGTTGATGG CAGATCTACT TAAAGATACT TATAAAAATA TTCTGAGCGA GGAGTTCAAA 300
CTATGTGATG CTTCAGCTGA GAAAACACTT TGCAATCTAT GCATATTAGA AGCAGAAAAA 360
AGAATTGGTG ATGAGGAAAA AGGAGATGAT ACATCTAATG ACAAAATGGA TAATATTCAT 420
CCGGATTTTA TTGAAGTTCT CGATGTGTTG AAATCTCATA AGTATTGTTG TCTTTTTGAA 480
TCTCGACTTC CTAGTCAGGA AGATAATCCA AACTCTCGTT ATACCAAACA AATTAAGCAG 540
CATATGGATT TACAAATTAT TCAAAACAAG CTAGAGCAAG GTGTTTATTC GCACATGAGA 600
CTTGCCAACT TCTTCAGAGA TCTCTTGTTG ATGTTCAACA ATGCTATGGT ATTTTATCCA 660
AAAGACACTC TTCAATACCC CGCCGCGCTT GAGCTCAAAG CCATTATTGT GAGAGAGATG 720
GGTAAGAAAC CCTTATTTCG TCGTGAAATT GTGCTTGCAT TACCTGCGAT ACGTAACCCA 780
ATGTTGGCCA AACAAAAATT GGAGAGAAAG ATGCGTAACA AAGCTCGAGG AGATGGTAAG 840
ACATGTGCCA AGAGGAGTGT TAAGTGA 868
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sot-0102 PGSC0003DMT400094462 Solanum tuberosum 60 1e-93 339
WERAM-Brr-0039 Bra007506.1-P Brassica rapa 36 7e-20 95.1
WERAM-Prp-0043 EMJ22101 Prunus persica 42 9e-20 94.7
WERAM-Viv-0085 VIT_13s0156g00340.t01 Vitis vinifera 40 1e-19 94.4
WERAM-Bro-0073 Bo4g106310.1 Brassica oleracea 31 3e-19 92.8
WERAM-Art-0058 AT2G44430.1 Arabidopsis thaliana 42 2e-18 90.5
WERAM-Arl-0077 fgenesh2_kg.4__ 2627__ AT2G44430.1 Arabidopsis lyrata 45 7e-18 88.6
WERAM-Thc-0062 EOY09477 Theobroma cacao 40 2e-17 87.4
WERAM-Mua-0126 GSMUA_Achr8P25530_001 Musa acuminata 41 2e-17 86.7
WERAM-Glm-0090 GLYMA08G15870.1 Glycine max 45 4e-17 85.9
WERAM-Sob-0110 Sb07g027680.1 Sorghum bicolor 34 1e-16 84.7
WERAM-Php-0024 PP1S148_42V6.1 Physcomitrella patens 37 3e-15 79.7
WERAM-Sem-0102 EFJ33930 Selaginella moellendorffii 36 2e-14 77.0
WERAM-Orp-0090 OPUNC08G18190.1 Oryza punctata 31 3e-14 76.3
WERAM-Ors-0071 OS07T0565300-01 Oryza sativa 33 1e-13 74.7
WERAM-Orr-0081 ORUFI07G19680.1 Oryza rufipogon 33 1e-13 74.7
WERAM-Ori-0078 BGIOSGA024080-PA Oryza indica 33 1e-13 74.7
WERAM-Tru-0078 TRIUR3_28812-P1 Triticum urartu 32 1e-13 74.7
WERAM-Orni-0041 ONIVA04G17620.1 Oryza nivara 33 1e-13 73.9
WERAM-Sei-0046 Si013408m Setaria italica 34 5e-13 72.0
WERAM-Amt-0030 ERN11592 Amborella trichopoda 40 8e-13 71.6
WERAM-Pot-0002 POPTR_0001s05120.1 Populus trichocarpa 48 1e-12 70.9
WERAM-Zem-0018 GRMZM2G022499_P01 Zea mays 29 2e-12 70.1
WERAM-Aet-0108 EMT21081 Aegilops tauschii 32 2e-12 70.1
WERAM-Org-0093 ORGLA08G0177200.1 Oryza glaberrima 29 3e-12 69.7
WERAM-Lep-0092 LPERR08G16990.1 Leersia perrieri 31 4e-12 69.3
WERAM-Orgl-0092 OGLUM08G21320.1 Oryza glumaepatula 29 5e-12 68.9
WERAM-Met-0045 AES66032 Medicago truncatula 38 7e-12 68.6
WERAM-Tra-0071 Traes_2BS_832F28506.1 Triticum aestivum 28 8e-12 68.2
WERAM-Brd-0083 BRADI3G40060.1 Brachypodium distachyon 31 2e-11 66.6
WERAM-Hov-0062 MLOC_56125.1 Hordeum vulgare 36 2e-10 63.5
WERAM-Orb-0096 OBART08G20090.1 Oryza barthii 29 3e-08 56.6
WERAM-Crn-0037 AAW45314 Cryptococcus neoformans 34 9e-08 55.1
WERAM-Orl-0103 KN541195.1_FGP005 Oryza longistaminata 29 1e-07 54.7
WERAM-Mod-0101 ENSMODP00000015310.3 Monodelphis domestica 26 3e-06 50.1
WERAM-Cis-0074 ENSCSAVP00000015952.1 Ciona savignyi 32 5e-06 48.9
Created Date 25-Jun-2016