WERAM Information

Tag Content
WERAM ID WERAM-Brr-0020
Ensembl Protein ID Bra004831.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra004831 Bra004831.1 Bra004831.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 9.90e-12 45.8 266 334
Organism Brassica rapa
Domain Profile
  Ac_Reader Bromodomain
      BROMO.txt   2 ehevsepFrepvdpqleipdYydiikePmdLstikerleegnYss.peefvkDvrlifnNakaynenkss 70 
                    +h+  + F+++v+  +e +dY+ ++k+++d++ti+++l +g Y s  + f++D++l+f N   + + +ss
  Bra004831.1-P 266 SHPRGSLFERRVRS-QESKDYKSLVKQHLDIETIQRKLTQGSYDSsKLTFYRDLQLLFANVIVFFPSSSS 334
                    688999********.8***************************99899************9999887765 PP
Protein Sequence
(Fasta)		MNDICSNDHN IDDNNNNNTN LKQHEGRAWG TCEELLLACA VKRHGFCDWD SVAAEVRTRT 60
SLSSVFLSAD DCRHKYRDLQ RRFKESADGD NDATAEEEGG NDIPWLEELR SLRVAELRRE 120
VEQYDVSILS LQLKVKKLEE ERDGGEKLDL VEEGERKGER SENDGGEKAE ESEREKRSMN 180
ESNSTGSGEK TVGEDEPGQT RGDDVDPDPV NAAEEGSGAS DSGELGESGT SGRKWKRKRR 240
KDSDGEIRSA ASESQPLIRL LDLIRSHPRG SLFERRVRSQ ESKDYKSLVK QHLDIETIQR 300
KLTQGSYDSS KLTFYRDLQL LFANVIVFFP SSSSESMAAH ELRAIVSEEM RKESGKSSPR 360
LLKASAGMSS IKAEAAETSE QKSSAPLVVC KRRRFVSAKA KASPSSSSFS QKEETKEETV 420
SEENENVETG GRSSKRTANS TKTGKGKNKQ KQAEEEAKTE KKVVVSSDKK KSVADFLKRI 480
KKSSPQKEDK DQNKSKKESK PKPRELRSNN VGKKKKAEVE NAATPVKRAP GRPPQKKTVE 540
AGGAAPXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXAVATAS 600
GKRGRESGST GKDNKQPKKR SRR 623
Nucleotide Sequence
(Fasta)		ATGAACGATA TTTGCAGTAA CGATCACAAT ATTGATGATA ACAACAACAA CAACACTAAT 60
CTAAAGCAGC ACGAGGGGCG CGCATGGGGC ACGTGTGAGG AGCTGTTATT GGCATGCGCC 120
GTTAAGCGAC ACGGGTTTTG TGACTGGGAC TCCGTCGCCG CGGAGGTTCG AACCCGGACC 180
TCTCTCTCCT CCGTCTTTCT CTCCGCTGAT GATTGCAGGC ACAAGTATCG AGATCTCCAG 240
CGTCGGTTCA AGGAATCCGC CGACGGCGAT AACGACGCGA CGGCGGAGGA GGAGGGAGGG 300
AATGATATCC CGTGGCTGGA AGAGCTGCGT AGCCTCCGTG TGGCGGAGCT CCGTCGTGAG 360
GTTGAACAGT ACGACGTTTC GATACTATCG CTTCAGTTGA AGGTTAAGAA GCTAGAGGAG 420
GAGAGAGACG GCGGCGAGAA ACTAGATCTG GTGGAAGAAG GAGAGAGGAA AGGAGAGAGA 480
TCGGAGAACG ACGGCGGTGA GAAGGCGGAG GAGTCCGAGC GGGAAAAACG GTCAATGAAC 540
GAGTCGAACT CGACGGGCTC CGGCGAGAAA ACCGTCGGAG AAGACGAACC GGGACAGACT 600
CGTGGTGATG ATGTAGATCC CGATCCGGTT AACGCTGCGG AGGAAGGATC GGGAGCGAGT 660
GACTCAGGCG AGTTGGGCGA GTCAGGGACG TCGGGGAGGA AGTGGAAAAG GAAACGACGG 720
AAAGATAGTG ACGGAGAGAT CAGATCGGCG GCGAGTGAAT CGCAGCCGTT GATACGTCTT 780
CTTGATTTGA TTCGGTCCCA TCCGCGTGGA TCTTTGTTCG AACGCCGGGT TCGAAGCCAG 840
GAGAGTAAGG ATTACAAGAG CCTGGTTAAG CAACATTTGG ACATTGAGAC AATACAGAGA 900
AAGCTGACGC AAGGATCCTA TGATTCTTCA AAGCTCACTT TTTACAGAGA TCTTCAGCTT 960
CTCTTCGCTA ATGTGATTGT GTTCTTCCCT TCGTCTTCTT CGGAATCAAT GGCTGCTCAT 1020
GAACTAAGAG CCATTGTTTC TGAAGAAATG AGGAAAGAGA GCGGGAAATC GAGTCCCCGG 1080
TTGTTAAAAG CATCAGCAGG TATGAGTAGT ATCAAAGCAG AAGCTGCTGA GACATCAGAA 1140
CAGAAGTCTT CAGCTCCACT TGTCGTTTGT AAGAGGAGAA GATTTGTTTC CGCTAAGGCT 1200
AAGGCTTCTC CATCGTCTTC AAGCTTTAGC CAGAAGGAGG AGACGAAAGA GGAGACAGTA 1260
TCAGAGGAGA ATGAGAACGT TGAGACTGGT GGAAGAAGCT CGAAAAGAAC AGCTAACAGT 1320
ACAAAGACGG GCAAAGGGAA GAACAAACAG AAACAGGCGG AGGAGGAGGC GAAAACAGAG 1380
AAGAAGGTGG TGGTTTCATC AGATAAGAAG AAGAGCGTGG CTGACTTCTT GAAGAGGATA 1440
AAGAAGAGCT CTCCGCAAAA GGAAGATAAA GATCAGAACA AGAGTAAGAA GGAGAGTAAA 1500
CCGAAACCAA GAGAGCTTAG AAGCAACAAT GTGGGTAAAA AGAAAAAGGC TGAGGTGGAG 1560
AATGCTGCTA CTCCGGTGAA AAGAGCTCCC GGGAGACCAC CGCAGAAGAA AACAGTGGAG 1620
GCGGGGGGGG CCGCCCCCTG NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1680
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1740
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNGCGGTTGC AACCGCCTCA 1800
GGGAAACGAG GTAGGGAAAG TGGAAGCACA GGAAAGGACA ATAAACAGCC AAAGAAAAGA 1860
AGCAGGAGAT GA 1873
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0065 Bo4g021680.1 Brassica oleracea 91 0.0 743
WERAM-Art-0058 AT2G44430.1 Arabidopsis thaliana 67 2e-126 450
WERAM-Arl-0077 fgenesh2_kg.4__ 2627__ AT2G44430.1 Arabidopsis lyrata 63 9e-116 415
WERAM-Viv-0085 VIT_13s0156g00340.t01 Vitis vinifera 44 1e-74 278
WERAM-Sol-0008 Solyc01g073950.2.1 Solanum lycopersicum 40 6e-67 253
WERAM-Pot-0008 POPTR_0001s23640.1 Populus trichocarpa 42 1e-62 238
WERAM-Glm-0090 GLYMA08G15870.1 Glycine max 37 5e-56 216
WERAM-Mua-0126 GSMUA_Achr8P25530_001 Musa acuminata 40 1e-54 212
WERAM-Prp-0043 EMJ22101 Prunus persica 38 2e-51 201
WERAM-Thc-0108 EOY32463 Theobroma cacao 33 7e-46 182
WERAM-Brd-0111 BRADI4G33820.1 Brachypodium distachyon 38 2e-42 171
WERAM-Met-0045 AES66032 Medicago truncatula 54 8e-32 136
WERAM-Hov-0108 MLOC_75616.3 Hordeum vulgare 33 2e-30 131
WERAM-Orp-0090 OPUNC08G18190.1 Oryza punctata 54 1e-27 122
WERAM-Sot-0018 PGSC0003DMT400016153 Solanum tuberosum 46 5e-27 120
WERAM-Orgl-0092 OGLUM08G21320.1 Oryza glumaepatula 51 5e-26 116
WERAM-Orni-0095 ONIVA08G22660.1 Oryza nivara 50 7e-26 116
WERAM-Sei-0046 Si013408m Setaria italica 52 2e-25 115
WERAM-Lep-0092 LPERR08G16990.1 Leersia perrieri 53 2e-22 104
WERAM-Sob-0110 Sb07g027680.1 Sorghum bicolor 39 8e-22 102
WERAM-Tru-0078 TRIUR3_28812-P1 Triticum urartu 37 1e-21 102
WERAM-Amt-0004 ERN03421 Amborella trichopoda 46 4e-20 97.1
WERAM-Php-0024 PP1S148_42V6.1 Physcomitrella patens 43 6e-20 96.7
WERAM-Org-0093 ORGLA08G0177200.1 Oryza glaberrima 35 2e-18 92.0
WERAM-Sem-0100 EFJ37441 Selaginella moellendorffii 38 4e-18 90.9
WERAM-Ors-0085 OS08T0510700-01 Oryza sativa 37 2e-17 88.2
WERAM-Orr-0099 ORUFI08G22500.1 Oryza rufipogon 37 2e-17 88.2
WERAM-Ori-0091 BGIOSGA026697-PA Oryza indica 37 2e-17 88.2
WERAM-Orb-0096 OBART08G20090.1 Oryza barthii 45 4e-17 87.4
WERAM-Aet-0108 EMT21081 Aegilops tauschii 36 1e-16 85.5
WERAM-Zem-0018 GRMZM2G022499_P01 Zea mays 33 4e-16 84.0
WERAM-Tra-0071 Traes_2BS_832F28506.1 Triticum aestivum 40 6e-14 76.6
WERAM-Orl-0103 KN541195.1_FGP005 Oryza longistaminata 36 7e-10 63.2
WERAM-Spr-0015 CBQ70270 Sporisorium reilianum 36 9e-10 62.8
WERAM-Usm-0004 UM00878P0 Ustilago maydis 35 5e-08 57.0
WERAM-Lab-0034 EDR12435 Laccaria bicolor 35 4e-07 54.3
WERAM-Crn-0037 AAW45314 Cryptococcus neoformans 32 1e-06 52.8
WERAM-Pug-0001 EFP74197 Puccinia graminis 31 2e-06 52.0
WERAM-Put-0004 PTTG_02664P0 Puccinia triticina 30 2e-06 51.6
WERAM-Hos-0085 ENSP00000254900.5 Homo sapiens 29 5e-06 50.4
WERAM-Mum-0188 ENSMUSP00000054234.2 Mus musculus 29 6e-06 50.1
WERAM-Pat-0140 ENSPTRP00000029549.3 Pan troglodytes 29 6e-06 50.1
Created Date 25-Jun-2016