WERAM Information

Tag Content
WERAM ID WERAM-Sot-0068
Ensembl Protein ID PGSC0003DMT400056775
Gene Name PGSC0003DMG400022079
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PGSC0003DMG400022079 PGSC0003DMT400056775 PGSC0003DMT400056775
PGSC0003DMG400022079 PGSC0003DMT400056776 PGSC0003DMT400056776
PGSC0003DMG400022079 PGSC0003DMT400056778 PGSC0003DMT400056778
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 5.50e-10 40.7 789 887
Organism Solanum tuberosum
Domain Profile
  Me_Reader PHD
               PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsC 50 
                            +C vC  ++ ge  ++ CdeC+  fH+ C++++  ++p+g +w+CpsC
  PGSC0003DMT400056775 789 YVCSVC--HYGGE--LLLCDECPSSFHTGCLGMK--EIPDG-EWFCPSC 830
                           579999..45553..9******************..*****.******* PP
               PHD.txt   3 iClvCgkddegeke.......mvqCdeCddwfHlkCvklp....lsslpegkswyCps 49 
                           +C +Cg++ +++++       ++ C++Cd+ +H++Cv  +    l   p g sw+C++
  PGSC0003DMT400056775 831 CCETCGQSRFDKNKdhftdssLLICSQCDHKYHARCVRNKglqkLDYYPVG-SWFCNK 887
                           7****8777776556677777999****************85555555555.9***96 PP
Protein Sequence
(Fasta)		MSMASKLQLH QNVEVRSIES GFLGSWHLAT IIAFDNFVPQ VQYHHLLSDD DASINLIESV 60
KLSPIRPFPP PLQFHTSLLS YGQCVDLFYQ DAWWEGVIFD HQNGALNRRV FFPDMGDEIN 120
AQLHNLRITQ DWDEVSQQWK PRGSWMFLQI IQEIENLHPL FVSLKQIWYQ IREKNGYQYL 180
KEWTSTSADS WRNLIKEVVH ENAMLTVKHI FCESNTSPDF LEGGPLLEFS QPTIQVETYF 240
DNSAIVPFIE AICKSISGEM LCMDRDVSCL QPIEKQLVSE GFGPISEDVP LSGSALFSSV 300
LPIQEEQQTV SPNASPVLHP PKNEISGTLS ITTSERLNFE SSNKIHSRKR KRVEWMTIAH 360
VAELCPDAVS EYNDNYMSNH RSPESLQKLK KHLFHLGWKI EQPKDCSITR TRYIAPDGKI 420
FQSLRQVCKM LEKSETWAEG QKTSYDGSSD DLNLSTCLAK TKTCSEVSEL PYTSQEPIID 480
PEICREAVIE YCSLGSPDNP AYKKLNSGEK KFMIMKAKKH LVAIGWIFYY YRGRDKRELR 540
YHSPHGKTFN TLLAACRWCM QQWKAEEQMP ELFSRSTVLE YQGNSAPQKT SCEKLSAATF 600
SVLPHAKEPA QLNKVTVCEI SKTRKKTNHA GGMLRKGNES RSSRTVTDGT ESQSSVGLLR 660
SSKKARQGTL SSSLHHTPRT VLSWLIDNNV VLPRAKVQYR GKRDGRPMAE GRITRAGIKC 720
KCCQKVYGIS SFEVHAGSSY HRPSANIFLE DGRSLLDCQL QMKEKASLRH TRKRPPLLKK 780
RSHLGTNDYV CSVCHYGGEL LLCDECPSSF HTGCLGMKEI PDGEWFCPSC CCETCGQSRF 840
DKNKDHFTDS SLLICSQCDH KYHARCVRNK GLQKLDYYPV GSWFCNKRCE QICLGIRQLL 900
AKPVMVGIDN LTWTLLKYVK PDDFDLDAAN DEFILETYSK LSVALDVMHE CFEPVKEPYT 960
RRDLMEDVIF NRWSELHRLN FQGFYTVLLE RNDEVISVAT VRVYGEKVAE VPLVATRFQY 1020
RRLGMCRILM NELEKKLMEL GVERLVLPAV PTVLNTWTTS FGFSMVKESQ RLNFLNYTFL 1080
DFQGTILCQK LLQNIPPEVS SESTAYQTQF DHINSKENVE LDGNSALSEV FQAEQIEESE 1140
IVDQGSTDAP GGCESNNIDA PAPFIIVVNQ QAPLGCQDET SLPYRAEVTD SKVLEKTGVV 1200
QYICYKRRKK ISACGS 1216
Nucleotide Sequence
(Fasta)		GCTTGGTAAA GGGTGAGAAC AGAAGTGTCA TCTATGTTGT TGAATGCAGA GATTGAAGAG 60
GTCTTTCTTT TTGTTTTGTG TTGTAGTGAA TAATAAAATC TTAATTTATT CTCAACTTTG 120
TCCTTGTGTT TGATGTTTTG GTGTTGGATT TTGATAATTT AGTGAAGGAA AATTGGGTAG 180
TGAAGTTTTG ATATAACTAT GTCTATGGCT TCCAAACTAC AACTTCATCA GAACGTTGAG 240
GTGAGGAGTA TTGAAAGTGG ATTCCTGGGT TCATGGCACT TAGCTACTAT CATTGCTTTT 300
GATAATTTTG TTCCACAAGT TCAATACCAT CACCTTCTCT CTGATGACGA TGCTTCTATC 360
AACTTGATTG AATCTGTTAA GCTTTCTCCA ATTAGGCCTT TCCCACCTCC ACTTCAATTT 420
CACACATCCC TTCTATCTTA TGGACAATGT GTTGATTTGT TTTATCAAGA TGCTTGGTGG 480
GAAGGAGTTA TATTTGATCA TCAAAATGGT GCCCTAAACC GCAGAGTTTT CTTTCCAGAT 540
ATGGGTGATG AAATCAATGC TCAACTCCAC AATCTACGTA TAACTCAAGA TTGGGATGAG 600
GTTTCACAAC AATGGAAGCC TCGTGGTAGC TGGATGTTTC TTCAAATTAT TCAGGAGATT 660
GAGAATCTCC ACCCCCTTTT CGTCTCACTC AAACAAATTT GGTATCAAAT CCGGGAGAAG 720
AATGGCTACC AATACCTCAA GGAATGGACA TCTACTTCGG CTGATAGCTG GAGGAACTTG 780
ATCAAGGAAG TTGTGCATGA AAACGCCATG TTAACCGTCA AGCATATTTT TTGTGAGTCC 840
AACACTTCAC CAGACTTTCT AGAGGGAGGT CCATTGCTAG AATTTTCACA ACCCACTATT 900
CAGGTTGAAA CATATTTTGA TAACTCAGCC ATTGTACCTT TTATTGAAGC CATATGCAAA 960
TCAATTAGTG GGGAGATGTT GTGTATGGAT CGGGATGTAT CATGTCTTCA GCCTATAGAA 1020
AAACAACTTG TTTCGGAGGG TTTTGGACCA ATCTCAGAGG ATGTTCCATT GAGTGGTAGT 1080
GCTTTATTTA GCTCAGTTCT GCCAATCCAA GAAGAACAAC AGACTGTATC ACCTAATGCT 1140
TCACCAGTTT TACATCCCCC TAAAAATGAA ATTTCTGGTA CTTTGTCAAT TACTACGAGT 1200
GAGAGACTGA ATTTTGAGTC TTCCAATAAG ATACATTCTA GAAAGAGGAA GCGAGTTGAG 1260
TGGATGACCA TCGCCCATGT AGCTGAGCTT TGTCCTGATG CAGTTTCCGA GTACAATGAT 1320
AATTATATGT CGAACCATAG GTCCCCAGAG TCCTTGCAAA AACTTAAGAA ACATTTGTTT 1380
CACTTAGGAT GGAAAATTGA GCAACCAAAG GATTGCAGCA TCACTAGGAC ACGGTACATT 1440
GCTCCTGATG GAAAAATATT CCAATCACTT CGTCAAGTTT GTAAGATGTT GGAAAAGTCA 1500
GAAACTTGGG CAGAAGGCCA AAAAACATCA TATGATGGTT CATCTGATGA CCTCAACTTG 1560
TCTACTTGCC TGGCAAAAAC AAAGACATGC AGTGAGGTGT CTGAGCTGCC ATATACTTCT 1620
CAAGAACCAA TCATTGATCC TGAAATTTGC CGTGAAGCTG TAATTGAATA TTGTTCACTG 1680
GGATCACCAG ATAATCCTGC CTATAAGAAG TTGAACAGTG GGGAAAAGAA GTTTATGATC 1740
ATGAAAGCTA AGAAGCACCT AGTTGCAATA GGATGGATAT TTTATTATTA TCGGGGAAGG 1800
GACAAGAGAG AATTGCGGTA CCATTCTCCT CATGGGAAAA CATTCAACAC TCTTCTAGCG 1860
GCATGCAGAT GGTGTATGCA GCAGTGGAAA GCTGAGGAAC AGATGCCTGA ATTATTTTCC 1920
CGGTCAACTG TTCTGGAATA TCAGGGGAAT TCGGCACCTC AAAAAACCTC ATGTGAGAAG 1980
TTATCAGCGG CGACATTTTC TGTCCTGCCA CATGCGAAAG AACCTGCTCA ACTTAATAAA 2040
GTCACAGTTT GTGAAATCAG CAAAACAAGA AAGAAGACTA ATCATGCAGG TGGCATGTTG 2100
AGAAAAGGAA ATGAATCTAG ATCTTCAAGA ACAGTAACAG ATGGTACAGA ATCTCAGTCT 2160
TCAGTTGGTC TGTTGCGATC CAGTAAAAAA GCTCGGCAGG GAACACTTTC TTCTTCCTTG 2220
CATCATACAC CTCGAACAGT TTTATCTTGG TTGATTGACA ATAATGTGGT TCTGCCGCGT 2280
GCGAAAGTGC AGTATCGTGG GAAAAGAGAT GGCCGTCCAA TGGCAGAAGG GCGGATCACT 2340
CGTGCAGGGA TCAAATGCAA GTGCTGCCAA AAAGTTTATG GAATTAGCAG TTTTGAGGTG 2400
CATGCTGGAA GCAGTTATCA CCGACCTTCA GCAAATATAT TTTTGGAAGA TGGACGATCC 2460
CTTCTTGATT GTCAACTGCA GATGAAAGAA AAGGCTAGTT TAAGACACAC GAGGAAGAGA 2520
CCACCTTTGT TGAAGAAGCG CAGCCATTTG GGCACAAATG ACTATGTGTG TTCCGTGTGC 2580
CATTATGGTG GTGAATTACT TCTGTGTGAT GAATGCCCAT CTTCCTTTCA TACTGGTTGC 2640
CTTGGAATGA AGGAGATCCC AGATGGAGAG TGGTTTTGCC CATCATGCTG TTGTGAAACC 2700
TGTGGCCAGA GCAGATTTGA TAAAAACAAA GACCACTTTA CCGACAGCAG TCTACTTATC 2760
TGCAGTCAGT GTGATCACAA GTATCATGCT CGGTGCGTGA GAAATAAGGG TCTTCAAAAG 2820
CTGGATTATT ATCCTGTAGG AAGTTGGTTT TGCAATAAGA GATGTGAGCA GATATGTTTG 2880
GGTATCCGCC AACTTTTGGC AAAGCCAGTT ATGGTGGGAA TTGATAACCT CACTTGGACT 2940
TTATTGAAAT ACGTGAAACC TGATGATTTT GATTTGGATG CTGCTAATGA TGAGTTCATC 3000
TTGGAGACTT ATAGTAAACT TAGTGTCGCT CTGGATGTGA TGCATGAATG CTTTGAGCCT 3060
GTCAAAGAAC CTTACACAAG GAGAGATCTT ATGGAAGATG TTATCTTTAA TAGATGGTCA 3120
GAGCTGCATC GCTTAAATTT TCAGGGTTTC TATACTGTGC TTCTGGAAAG AAATGATGAA 3180
GTTATTTCAG TAGCAACTGT AAGGGTTTAT GGAGAAAAGG TAGCCGAGGT TCCTCTTGTG 3240
GCAACAAGAT TTCAGTACCG CCGACTTGGA ATGTGTCGCA TCTTAATGAA TGAGCTTGAA 3300
AAGAAACTCA TGGAATTAGG AGTTGAGAGG CTAGTTTTGC CTGCTGTCCC CACCGTGCTA 3360
AACACATGGA CCACTTCATT TGGTTTCTCA ATGGTGAAAG AATCTCAGAG GTTAAACTTC 3420
TTGAATTACA CTTTCCTTGA TTTCCAGGGT ACAATATTGT GTCAGAAACT TCTCCAGAAT 3480
ATCCCTCCAG AGGTATCAAG TGAATCAACA GCTTATCAAA CTCAATTTGA CCACATAAAC 3540
AGCAAGGAGA ATGTTGAGTT GGATGGAAAC AGTGCGCTTT CTGAGGTCTT CCAAGCTGAG 3600
CAAATTGAGG AGAGTGAAAT TGTGGACCAA GGATCTACAG ATGCACCTGG AGGATGTGAA 3660
AGCAATAATA TTGATGCTCC AGCTCCTTTC ATTATTGTGG TGAACCAACA AGCTCCTCTT 3720
GGCTGCCAGG ATGAAACTAG TCTGCCGTAC CGAGCTGAAG TTACTGATAG TAAGGTCTTA 3780
GAAAAAACAG GTGTTGTTCA ATACATATGT TACAAGCGGA GAAAAAAGAT ATCAGCCTGT 3840
GGAAGCTAAG CTGGTTTTGG AAGGAGTAGC TATCTAGTAA GCTCTGGTAA AATATTAGAA 3900
AAAGAAGAAA CAAGCATGGA AGTTTGATGG GGTCAAATAC TTTTGCTTTG TTAACCTTAT 3960
GTTTTCCTTG TTAAAGGAGG GAAGCTAGTG GTGTATATGT TCATGTACAG TTATCTCTAG 4020
GTACATAAAT CTTTTCTAAT CCTAAAAGTA CAAATGTATA GAACCACAGT CCACGGCTTG 4080
CAAGTATTCA ATGTCACTCC GCAAATGTAT ATCTAGTCTT TATTTGTTGA TTTGAAAATT 4140
TTATTCACAT GTATGATCAT AAAATCAATT AGGAAATTAA ATTTTTGGAT CAGTCTAATT 4200
TGAATATTAT ATCATGTGCA TGCGCT 4227
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sol-0109 Solyc09g031580.2.1 Solanum lycopersicum 91 0.0 2293
WERAM-Prp-0127 EMJ08257 Prunus persica 43 0.0 902
WERAM-Glm-0132 GLYMA11G27510.1 Glycine max 40 0.0 782
WERAM-Met-0133 AES98667 Medicago truncatula 41 0.0 745
WERAM-Thc-0093 EOY15722 Theobroma cacao 47 1e-152 538
WERAM-Arl-0028 fgenesh1_pg.C_scaffold_8001866 Arabidopsis lyrata 50 8e-141 499
WERAM-Pot-0028 POPTR_0002s11940.1 Populus trichocarpa 45 6e-137 486
WERAM-Sei-0136 Si038769m Setaria italica 36 2e-129 461
WERAM-Amt-0093 ERN04860 Amborella trichopoda 50 7e-127 452
WERAM-Mua-0147 GSMUA_AchrUn_randomP01500_001 Musa acuminata 37 8e-117 419
WERAM-Tra-0147 Traes_4BL_F428A5CDC.1 Triticum aestivum 46 9e-117 419
WERAM-Tru-0037 TRIUR3_18780-P1 Triticum urartu 45 6e-115 413
WERAM-Sob-0012 Sb01g038485.1 Sorghum bicolor 40 2e-114 411
WERAM-Aet-0069 EMT23788 Aegilops tauschii 45 2e-114 411
WERAM-Sem-0001 EFJ24916 Selaginella moellendorffii 43 1e-96 352
WERAM-Viv-0120 VIT_19s0014g01500.t01 Vitis vinifera 37 1e-89 329
WERAM-Php-0118 PP1S59_348V6.1 Physcomitrella patens 35 1e-87 322
WERAM-Orm-0079 OMERI07G23850.1 Oryza meridionalis 39 1e-83 309
WERAM-Orp-0069 OPUNC07G04530.3 Oryza punctata 34 7e-83 306
WERAM-Orb-0084 OBART07G27320.1 Oryza barthii 41 3e-82 304
WERAM-Zem-0139 GRMZM2G434715_P01 Zea mays 38 7e-82 303
WERAM-Org-0083 ORGLA07G0217500.1 Oryza glaberrima 41 8e-82 303
WERAM-Orl-0111 KN542919.1_FGP001 Oryza longistaminata 34 7e-81 300
WERAM-Orgl-0070 OGLUM07G04140.1 Oryza glumaepatula 34 7e-81 300
WERAM-Orni-0071 ONIVA07G03330.1 Oryza nivara 34 1e-80 299
WERAM-Orr-0074 ORUFI07G04440.1 Oryza rufipogon 34 1e-80 299
WERAM-Ori-0082 BGIOSGA025231-PA Oryza indica 34 1e-80 299
WERAM-Orbr-0080 OB07G13580.1 Oryza brachyantha 33 6e-80 296
WERAM-Lep-0071 LPERR07G04130.1 Leersia perrieri 32 3e-79 295
WERAM-Art-0071 AT3G14980.1 Arabidopsis thaliana 37 3e-78 291
WERAM-Bro-0100 Bo5g127560.1 Brassica oleracea 34 3e-77 288
WERAM-Brr-0136 Bra027290.1-P Brassica rapa 37 3e-77 288
WERAM-Brd-0130 BRADI5G27517.1 Brachypodium distachyon 35 2e-76 285
WERAM-Hov-0086 MLOC_65889.1 Hordeum vulgare 37 8e-76 283
WERAM-Ors-0046 OS04T0691700-01 Oryza sativa 38 1e-59 229
WERAM-Cym-0028 CMR472CT Cyanidioschyzon merolae 45 1e-12 73.6
WERAM-Orla-0187 ENSORLP00000021515.1 Oryzias latipes 46 3e-11 68.9
WERAM-Cae-0002 T14G8.1 Caenorhabditis elegans 31 4e-11 68.6
WERAM-Ten-0050 ENSTNIP00000006981.1 Tetraodon nigroviridis 36 6e-11 67.8
WERAM-Dar-0054 ENSDARP00000127601.1 Danio rerio 61 6e-11 67.8
WERAM-Anp-0142 ENSAPLP00000015426.1 Anas platyrhynchos 56 6e-11 67.8
WERAM-Asm-0214 ENSAMXP00000020556.1 Astyanax mexicanus 61 6e-11 67.8
WERAM-Fia-0003 ENSFALP00000000206.1 Ficedula albicollis 37 6e-11 67.8
WERAM-Leo-0071 ENSLOCP00000009062.1 Lepisosteus oculatus 35 7e-11 67.8
WERAM-Pof-0104 ENSPFOP00000009594.2 Poecilia formosa 61 7e-11 67.8
WERAM-Xim-0007 ENSXMAP00000001083.1 Xiphophorus maculatus 61 7e-11 67.8
WERAM-Gaa-0200 ENSGACP00000024737.1 Gasterosteus aculeatus 61 7e-11 67.8
Created Date 25-Jun-2016