WERAM Information

Tag Content
WERAM ID WERAM-Orb-0016
Ensembl Protein ID OBART02G00740.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
OBART02G00740 OBART02G00740.1 OBART02G00740.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM2 3.70e-69 233.6 542 915
Organism Oryza barthii
Domain Profile
  HDM JHDM2
        JHDM2.txt   2 Yc.krdgklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvyvgilkkkwa 69 
                      Y+ ++ g+lNLa+klpk + +pdlgPk+y AyG+a+e + ++++t++h+d+sdavnil++ +    k +
  OBART02G00740.1 542 YTdPKSGPLNLAVKLPKHVKKPDLGPKTYIAYGVAQELGIGDSVTKIHCDMSDAVNILMHTDEVELKAE 610
                      6523679*****************************************************887655533 PP
        JHDM2.txt  96 pkekpgalWhifaakdaekirellekvskeqga....evppdhdpihdqswyldrklrkrLfeeyGvegwtlvQklgdavlipagapHqvqnlk 185
                       +++ galW+if+++d+ k++++l k+ +e+++     v+++ +pihdq +yl+++++++L+ee+G+e+wt+ Qklg+av+ipag+pHqv+nlk
  OBART02G00740.1 796 NQTEGGALWDIFRREDVSKLHDYLMKHAEEFRHynyeTVKQVSHPIHDQCFYLTNEHKRKLKEEHGIEPWTFEQKLGEAVFIPAGCPHQVRNLK 889
                      567789***************************9988889999*************************************************** PP
        JHDM2.txt 186 scvkvaedFvsPEnvkecfrltkeyr 211
                      sc+kva dFvsPEnv+ec+rlt+e+r
  OBART02G00740.1 890 SCIKVALDFVSPENVQECIRLTEEFR 915
                      ************************98 PP
Protein Sequence
(Fasta)		MPPKRKRGGG RPRKAPEDAA AKENGEKTNK EEETQASPEE NGAGQSQASR TARKRRKGPV 60
ADPSSTELPP RKLRDRRNVP AVDYKENKHT KKMDGTSTMC HQCQRKDSGR VVRCRNGAEK 120
NRRHRYCVKC IKRWYPHLTE DDFENCCPVC HNNCNCKTCL RTNVINKGDK EFADGKNKIK 180
YSLRIARFLL PWLKQLHQEQ MLEKSVEATI KGIDVTDLEV PQAQFNNDER IYCDNCRTSI 240
VDFHRSCKSG HYDLCLSCCQ ELRQGLTTGT VVTCDTAVDV PEIEGKEGLQ EGSSHSSAVG 300
QGASDQQNDR LIGSAAPSED CTPSLIWRAK SNGSIPCPPN AGGCGDCLLE LRCLFKENFI 360
SDLLDKVNSV VNKETEQELG GSRCSCFTES GEVNNETSRK SACREDSNDN YIYCPTAREV 420
QSGALDHFQQ HWLNGQPVIV RDVLELTSGL SWEPMVMWRA LREKRDKKEH ERLSVIALDC 480
LTWFEVDINI HMFFEGYSRG AVGLEDLPVL LKLKDWPQHS SFEERLPRHG AEFMSALPFR 540
EYTDPKSGPL NLAVKLPKHV KKPDLGPKTY IAYGVAQELG IGDSVTKIHC DMSDAVNILM 600
HTDEVELKAE RITAIEKKKE SLRKDGKNLH VLRPDRDDDT SIALSESTEV PRSRGLENGS 660
SIKQPAPNVA VMDQGGVHTD MVADEAEGNL SLSNGQSPNQ SDAHNMDITF SKGETDHSIC 720
TINGGEEMGN GFGREDKCKS SHGVGSSESS DCQRRSRRRD ACSSSATGEI NETSMETNKF 780
TISIEPKDDH PFVEGNQTEG GALWDIFRRE DVSKLHDYLM KHAEEFRHYN YETVKQVSHP 840
IHDQCFYLTN EHKRKLKEEH GIEPWTFEQK LGEAVFIPAG CPHQVRNLKS CIKVALDFVS 900
PENVQECIRL TEEFRLLPKG HRVNEDKLEV KKIALYALDQ AIDDITGKSC NERTKDEGEE 960
EASAPSVS 968
Nucleotide Sequence
(Fasta)		ATGCCGCCCA AGAGGAAGCG CGGTGGCGGG AGGCCGCGCA AGGCCCCGGA GGACGCCGCC 60
GCCAAGGAAA ACGGTGAGAA GACAAACAAG GAGGAGGAAA CGCAGGCTTC TCCTGAGGAG 120
AATGGCGCAG GGCAGTCTCA GGCCTCGAGA ACCGCAAGAA AGCGCAGGAA GGGTCCTGTT 180
GCTGATCCCT CTTCGACTGA ACTTCCACCC AGGAAGCTCA GGGACAGGCG GAACGTTCCA 240
GCGGTAGACT ACAAGGAGAA TAAGCACACA AAAAAGATGG ATGGAACTTC AACCATGTGC 300
CATCAGTGCC AAAGGAAGGA CAGTGGAAGA GTTGTGAGGT GCCGGAATGG TGCTGAAAAA 360
AACAGGAGGC ACAGATATTG TGTCAAGTGC ATCAAACGCT GGTACCCGCA TCTAACAGAG 420
GACGATTTTG AGAACTGCTG TCCAGTTTGT CACAATAACT GCAATTGTAA GACTTGTCTG 480
CGGACAAATG TAATAAATAA GGGTGACAAG GAGTTTGCCG ATGGTAAGAA CAAAATTAAA 540
TACTCTCTGC GTATTGCACG CTTTTTGCTC CCTTGGTTGA AACAACTTCA CCAAGAGCAG 600
ATGCTAGAGA AAAGTGTTGA GGCCACAATT AAAGGGATCG ATGTAACTGA CTTGGAGGTT 660
CCTCAAGCTC AGTTTAATAA TGATGAGCGG ATTTACTGTG ATAACTGCAG AACATCCATT 720
GTTGACTTCC ACAGAAGTTG TAAAAGTGGT CACTATGATC TCTGCCTCAG CTGCTGCCAG 780
GAGTTGCGTC AAGGTCTTAC TACTGGTACT GTTGTCACTT GTGACACAGC TGTTGATGTA 840
CCTGAAATAG AAGGCAAGGA AGGTTTGCAA GAGGGAAGTA GTCATAGCAG TGCTGTAGGT 900
CAAGGGGCTT CTGATCAACA GAATGACAGG TTGATAGGTA GTGCAGCTCC TTCAGAGGAT 960
TGCACTCCTA GTTTGATATG GAGGGCAAAA AGCAACGGAA GCATACCATG CCCACCTAAT 1020
GCAGGTGGTT GCGGGGATTG TCTTCTCGAA CTTAGGTGTT TGTTTAAGGA GAACTTTATT 1080
TCTGATTTAC TGGATAAAGT CAATTCAGTG GTCAATAAGG AAACAGAGCA GGAGTTGGGA 1140
GGCTCTAGAT GTTCCTGCTT CACTGAATCC GGTGAAGTGA ACAATGAAAC ATCACGGAAA 1200
TCAGCTTGCA GAGAGGACTC CAATGATAAC TACATATATT GTCCAACTGC TAGAGAAGTT 1260
CAAAGTGGAG CTTTAGATCA TTTTCAGCAG CATTGGTTGA ATGGTCAGCC AGTCATTGTT 1320
CGTGACGTGC TTGAGCTAAC TTCTGGACTG AGCTGGGAGC CAATGGTTAT GTGGCGGGCC 1380
TTACGGGAAA AGAGAGACAA GAAAGAGCAT GAACGGCTCT CAGTTATAGC TCTTGATTGT 1440
CTGACATGGT TTGAGGTTGA TATAAATATT CACATGTTTT TTGAGGGGTA TTCCCGTGGA 1500
GCTGTTGGTT TGGAGGATTT GCCTGTGCTA CTTAAGCTTA AAGATTGGCC ACAACATAGT 1560
TCCTTTGAGG AGCGCCTGCC GCGGCATGGT GCTGAGTTCA TGTCTGCACT ACCATTTCGT 1620
GAGTATACAG ATCCAAAATC TGGTCCCCTT AATCTGGCAG TGAAGCTTCC AAAACATGTT 1680
AAAAAGCCAG ATCTTGGTCC AAAGACATAC ATTGCTTATG GTGTCGCCCA AGAGTTGGGA 1740
ATAGGTGATT CTGTTACGAA GATCCATTGC GACATGTCTG ATGCGGTTAA TATTCTCATG 1800
CATACTGATG AGGTAGAACT CAAAGCTGAA AGGATTACAG CAATAGAGAA AAAGAAAGAG 1860
AGCTTACGTA AAGATGGCAA GAATCTTCAT GTTCTGCGAC CAGACCGTGA CGATGATACA 1920
TCAATAGCTC TCAGTGAATC AACTGAAGTG CCAAGATCTC GAGGACTTGA AAATGGCTCA 1980
AGCATTAAGC AGCCAGCACC AAATGTTGCT GTAATGGACC AGGGAGGTGT TCATACAGAT 2040
ATGGTAGCTG ATGAAGCTGA GGGAAACTTG AGTCTGTCTA ACGGGCAATC ACCCAATCAA 2100
AGTGATGCAC ATAATATGGA TATTACTTTC TCCAAGGGGG AAACAGACCA TTCTATCTGC 2160
ACAATTAATG GGGGAGAGGA GATGGGCAAT GGCTTTGGGA GGGAAGATAA ATGTAAATCT 2220
TCTCATGGTG TAGGATCATC TGAATCTTCT GATTGTCAAA GACGCAGTAG GCGACGTGAT 2280
GCTTGCTCTT CCAGTGCAAC AGGGGAAATA AACGAAACCA GCATGGAGAC TAACAAATTT 2340
ACCATATCTA TTGAGCCCAA AGATGATCAC CCATTTGTTG AGGGAAATCA GACAGAGGGT 2400
GGTGCATTGT GGGATATCTT CCGACGTGAA GATGTCAGCA AATTGCATGA TTATCTGATG 2460
AAGCATGCAG AAGAGTTTAG ACATTATAAT TATGAAACAG TCAAACAGGT TTCTCATCCT 2520
ATTCACGATC AATGCTTTTA TCTAACAAAT GAGCACAAGA GAAAGCTCAA GGAAGAACAT 2580
GGAATTGAGC CTTGGACATT TGAACAGAAA CTTGGTGAGG CTGTGTTTAT CCCAGCAGGA 2640
TGTCCCCACC AAGTCAGAAA TTTGAAGTCA TGTATAAAGG TTGCACTTGA CTTTGTTTCT 2700
CCGGAAAATG TGCAAGAGTG CATCAGGCTG ACAGAAGAAT TTCGCTTGCT TCCGAAGGGT 2760
CATAGGGTGA ATGAAGATAA ACTAGAGGTG AAGAAGATAG CTCTATATGC ACTTGATCAA 2820
GCCATTGACG ATATCACAGG CAAAAGTTGC AATGAAAGGA CAAAGGATGA AGGGGAAGAG 2880
GAGGCGTCTG CCCCAAGTGT TAGTTAA 2908
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orgl-0017 OGLUM02G00660.1 Oryza glumaepatula 100 0.0 1853
WERAM-Orr-0016 ORUFI02G00790.1 Oryza rufipogon 100 0.0 1851
WERAM-Orni-0087 ONIVA08G02050.1 Oryza nivara 100 0.0 1849
WERAM-Ori-0020 BGIOSGA007275-PA Oryza indica 100 0.0 1849
WERAM-Orm-0018 OMERI02G00250.1 Oryza meridionalis 99 0.0 1845
WERAM-Org-0016 ORGLA02G0006900.1 Oryza glaberrima 97 0.0 1805
WERAM-Orp-0017 OPUNC02G00280.1 Oryza punctata 90 0.0 1656
WERAM-Orbr-0020 OB02G10630.1 Oryza brachyantha 81 0.0 1492
WERAM-Lep-0019 LPERR02G00580.1 Leersia perrieri 78 0.0 1397
WERAM-Brd-0062 BRADI3G01060.1 Brachypodium distachyon 62 0.0 1138
WERAM-Sei-0062 Si016268m Setaria italica 65 0.0 1110
WERAM-Tra-0279 Traes_6DS_BF9884650.1 Triticum aestivum 61 0.0 1098
WERAM-Tru-0016 TRIUR3_07101-P1 Triticum urartu 57 0.0 1074
WERAM-Aet-0029 EMT12717 Aegilops tauschii 58 0.0 1043
WERAM-Zem-0041 GRMZM2G054162_P01 Zea mays 58 0.0 1014
WERAM-Sob-0062 Sb04g000775.1 Sorghum bicolor 64 0.0 958
WERAM-Hov-0005 MLOC_11348.2 Hordeum vulgare 63 0.0 721
WERAM-Ors-0012 OS02T0109400-00 Oryza sativa 99 0.0 707
WERAM-Thc-0027 EOX99098 Theobroma cacao 44 0.0 660
WERAM-Viv-0094 VIT_15s0046g00340.t01 Vitis vinifera 43 0.0 636
WERAM-Brr-0187 Bra037394.1-P Brassica rapa 41 6e-161 565
WERAM-Mua-0058 GSMUA_Achr3P14190_001 Musa acuminata 53 1e-153 541
WERAM-Orl-0076 KN539615.1_FGP001 Oryza longistaminata 48 1e-141 501
WERAM-Prp-0116 EMJ12151 Prunus persica 42 3e-138 490
WERAM-Glm-0135 GLYMA11G31863.1 Glycine max 48 4e-136 483
WERAM-Amt-0041 ERN17369 Amborella trichopoda 47 4e-135 479
WERAM-Met-0021 KEH42473 Medicago truncatula 45 1e-129 462
WERAM-Sol-0064 Solyc04g049140.2.1 Solanum lycopersicum 45 9e-129 459
WERAM-Sot-0039 PGSC0003DMT400035505 Solanum tuberosum 44 2e-126 451
WERAM-Pot-0063 POPTR_0005s09360.1 Populus trichocarpa 45 1e-124 445
WERAM-Php-0099 PP1S430_29V6.1 Physcomitrella patens 44 2e-119 427
WERAM-Bro-0103 Bo5g141320.1 Brassica oleracea 43 3e-113 407
WERAM-Arl-0040 fgenesh1_pm.C_scaffold_8000499 Arabidopsis lyrata 42 2e-110 397
WERAM-Art-0023 AT1G62310.1 Arabidopsis thaliana 43 8e-109 392
WERAM-Xet-0113 ENSXETP00000038986.2 Xenopus tropicalis 50 1e-34 145
WERAM-Leo-0085 ENSLOCP00000011676.1 Lepisosteus oculatus 50 4e-34 144
WERAM-Ten-0123 ENSTNIP00000013426.1 Tetraodon nigroviridis 50 7e-34 143
WERAM-Tar-0009 ENSTRUP00000002076.1 Takifugu rubripes 50 8e-34 143
WERAM-Orc-0105 ENSOCUP00000008900.3 Oryctolagus cuniculus 45 1e-33 143
WERAM-Orn-0157 ENSONIP00000016309.1 Oreochromis niloticus 50 1e-33 143
WERAM-Ora-0091 ENSOANP00000016437.2 Ornithorhynchus anatinus 46 1e-33 143
WERAM-Pof-0098 ENSPFOP00000008824.2 Poecilia formosa 50 1e-33 142
WERAM-Sah-0129 ENSSHAP00000013821.1 Sarcophilus harrisii 49 1e-33 142
WERAM-Gaa-0189 ENSGACP00000023958.1 Gasterosteus aculeatus 50 1e-33 142
WERAM-Mod-0100 ENSMODP00000015209.4 Monodelphis domestica 49 2e-33 142
WERAM-Xim-0102 ENSXMAP00000009010.1 Xiphophorus maculatus 50 2e-33 142
WERAM-Tub-0003 ENSTBEP00000000295.1 Tupaia belangeri 49 2e-33 142
WERAM-Asm-0165 ENSAMXP00000016507.1 Astyanax mexicanus 49 2e-33 142
WERAM-Orla-0053 ENSORLP00000006841.1 Oryzias latipes 50 2e-33 142
WERAM-Mae-0023 ENSMEUP00000001666.1 Macropus eugenii 49 2e-33 142
WERAM-Loa-0020 ENSLAFP00000001269.3 Loxodonta africana 49 3e-33 141
WERAM-Anc-0075 ENSACAP00000007027.2 Anolis carolinensis 49 3e-33 141
WERAM-Bot-0099 ENSBTAP00000013278.4 Bos taurus 49 3e-33 141
WERAM-Aim-0189 ENSAMEP00000017468.1 Ailuropoda melanoleuca 49 3e-33 141
WERAM-Gog-0012 ENSGGOP00000000822.2 Gorilla gorilla 49 3e-33 141
WERAM-Hos-0102 ENSP00000326563.5 Homo sapiens 49 3e-33 141
WERAM-Mup-0101 ENSMPUP00000009333.1 Mustela putorius furo 49 3e-33 141
WERAM-Mam-0003 ENSMMUP00000000618.2 Macaca mulatta 49 3e-33 141
WERAM-Myl-0184 ENSMLUP00000015336.2 Myotis lucifugus 49 3e-33 141
WERAM-Sus-0108 ENSSSCP00000015245.2 Sus scrofa 49 3e-33 141
WERAM-Pat-0141 ENSPTRP00000029560.2 Pan troglodytes 49 3e-33 141
WERAM-Fec-0021 ENSFCAP00000001589.3 Felis catus 49 3e-33 141
WERAM-Otg-0093 ENSOGAP00000008081.2 Otolemur garnettii 49 3e-33 141
WERAM-Caf-0016 ENSCAFP00000001774.3 Canis familiaris 49 3e-33 141
WERAM-Poa-0141 ENSPPYP00000017696.1 Pongo abelii 49 3e-33 141
WERAM-Cap-0028 ENSCPOP00000002138.2 Cavia porcellus 48 3e-33 141
WERAM-Ere-0095 ENSEEUP00000009792.1 Erinaceus europaeus 49 4e-33 141
WERAM-Dan-0091 ENSDNOP00000009144.3 Dasypus novemcinctus 49 4e-33 141
WERAM-Dar-0145 ENSDARP00000084278.5 Danio rerio 50 4e-33 141
WERAM-Chs-0157 ENSCSAP00000009298.1 Chlorocebus sabaeus 49 4e-33 141
WERAM-Mim-0018 ENSMICP00000001555.1 Microcebus murinus 49 4e-33 141
WERAM-Ptv-0087 ENSPVAP00000007885.1 Pteropus vampyrus 49 4e-33 141
WERAM-Ova-0174 ENSOARP00000017606.1 Ovis aries 49 4e-33 141
WERAM-Eqc-0143 ENSECAP00000015928.1 Equus caballus 49 4e-33 141
WERAM-Nol-0092 ENSNLEP00000010895.1 Nomascus leucogenys 49 4e-33 140
Created Date 25-Jun-2016