WERAM Information

Tag Content
WERAM ID WERAM-Sus-0125
Ensembl Protein ID ENSSSCP00000017701.2
Gene Name CBX3
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSSSCG00000016711.2 ENSSSCT00000018192.2 ENSSSCP00000017701.2
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader Chromodomain 2.10e-18 66.5 30 169
Me_Reader DCD 2.40e-35 107.5 32 81
Organism Sus scrofa
Domain Profile
  Me_Reader Chromodomain
      Chromodomain.txt  1 FeverivdkkelrkgeveYlVrWkGynksddtWepeenLlckelleefekkkek 54
                          F ve+++ ++++ +g+veY+ +WkG+++ d+tWepeenL c+el+e+f + ++ 
  ENSSSCP00000017701.2 30 FVVEKVL-DRRVVNGKVEYFLKWKGFTDADNTWEPEENLDCPELIEAFLNSQKA 82
                          78*****.9**************************************9765544 PP
      Chromodomain.txt  13 rkgeveYlVrWkGynksddtWepeenLlckelleefek 50 
                             ge  +l +Wk  ++ d     e n++c++++ +f +
  ENSSSCP00000017701.2 132 SSGELMFLMKWKDSDEADLVLAKEANMKCPQIVIAFYE 169
                           56788899999988877777778888889888888866 PP
  Me_Reader DCD
          Chromo-2.txt  3 verIinhsvdkkGelhyLikWkdlpYdeaswesatvenkkypqlvqsfyeere 55
                          ve++++     +G+++y++kWk+     a+   + +en ++p+l+++f ++++
  ENSSSCP00000017701.2 32 VEKVLDRR-VVNGKVEYFLKWKGF--TDADNTWEPEENLDCPELIEAFLNSQK 81
                          67777777.679***********7..77777777789***********99876 PP
          Chromo-2.txt   2 mverIinhsvdkkGelhyLikWkdlpYdeaswesatvenkkypqlvqsfyeeresmrgee 61 
                            +erIi+++ d++Gel++L+kWkd+  dea+++ a+++n+k+pq+v++fyeer+++++++
  ENSSSCP00000017701.2 122 DPERIIGAT-DSSGELMFLMKWKDS--DEADLVLAKEANMKCPQIVIAFYEERLTWHSCP 178
                           69*******.***************..******************************987 PP
Protein Sequence
(Fasta)		MASNKTTLQK MGKKQNGKSK KVEEAEPEEF VVEKVLDRRV VNGKVEYFLK WKGFTDADNT 60
WEPEENLDCP ELIEAFLNSQ KAGKEKDGAK RKSLSDSESD DSKSKKKRDA ADKPRGFARG 120
LDPERIIGAT DSSGELMFLM KWKDSDEADL VLAKEANMKC PQIVIAFYEE RLTWHSCPED 180
EAQ 183
Nucleotide Sequence
(Fasta)		ATGTGGCTGG AGCTAGAGGC GCGCAGGGCC GAGGACGCCG CAGACCTGGG ACCCGGAGCA 60
GCTCTGAGGC GGTGAATAAT AGCTCTTCAA GTCTGCAATA AAAAATGGCC TCCAATAAAA 120
CTACATTGCA AAAAATGGGA AAGAAACAAA ATGGAAAAAG TAAAAAAGTT GAAGAGGCAG 180
AGCCTGAAGA ATTTGTTGTA GAAAAAGTAC TGGACCGACG TGTAGTGAAT GGGAAAGTGG 240
AATATTTCCT AAAGTGGAAG GGGTTTACAG ATGCAGACAA TACTTGGGAA CCTGAAGAAA 300
ATTTGGATTG TCCAGAGTTA ATTGAAGCAT TTCTTAATTC TCAAAAAGCT GGTAAAGAAA 360
AAGATGGAGC AAAAAGAAAG TCATTATCTG ACAGTGAATC TGATGATAGC AAATCAAAGA 420
AGAAAAGAGA TGCTGCTGAT AAACCAAGAG GTTTTGCCAG AGGTCTTGAT CCAGAACGAA 480
TAATTGGTGC CACAGACAGC AGTGGAGAAT TAATGTTTCT CATGAAATGG AAAGATTCAG 540
ATGAGGCGGA CTTGGTGCTG GCAAAAGAGG CAAATATGAA GTGTCCTCAA ATTGTAATTG 600
CTTTTTATGA AGAGAGGCTA ACTTGGCATT CTTGTCCAGA AGATGAAGCT CAATAATTGT 660
TTGCATTGCT TTTTATATAT ATTTATACAT ATATATAAAA TCTGGGTCTC AGTTTTTTTT 720
GATTATTAGT GTGAAGAAAT AATGACATTC TAATGAAAAT CAAGTTTGAT ATGTTCGTTT 780
TGAAGTAGTA TTGGGCAAGT TGTTGGGGAT TTTTGTTTTT TGCATCTGTA GCACTGGTTA 840
CTTTGAACAA ATAAAAGCTT TCTGTAGTTG CTTCCTTTAG CAGAAAAGAA CATTTGATAC 900
TATGGTATAT TATTTCCTCG GCATTAGAGA ACAGCTTTTC TAAATGTTGG GGAAAATCTA 960
TAGTCATTGC TCAATCAGAA TTTAGAATTT GCATTTAACT CATAAATGCT TAAGGACCAT 1020
TCTGGGTTTT TCATGTGTGT ATACATAAAA TACATAAATA TGTGGCTTGG GGTTTTTTTG 1080
TTTTGGGGTA TTTTTTAATA CATTTACCAA AACAAAAATA GCATTTCACA ACCATGCATA 1140
ATCCCATGTT TCCGGGATTC CATAATTTTA AGCAATATAA GAAATCATTT CGACTTAAAC 1200
TGAAATTTTT CAAGTCTTAA CATTTCAAAT TAATTTTGTA ATTAATTGGA CAACTTTAAA 1260
CAATTTAAAT TGGACACTTT AAAGCAGCCA TATCAGAATC TGTATCCATA TCTACAGTCA 1320
TATAAATGCA GTTTTATATC AGAATCCCTA AAAGGAAAAT TTTATCACTA CCAACAGCCT 1380
CCCCACTCAA ATGAAAAAAC TAGAAAAATC CTACTGTGTT TTAAATAAGC CAAGCAACAC 1440
TTAGTTAAAT GGACATTTAA AGGTTCCTTC TGGTGAACCA TTACTTTACA AGAAGTTAAA 1500
ATCCCTGTGC TGTATTATAT TGACTGAAAT GCCATGATAC ATGGAATTTC TAAGACTTGT 1560
TCATGGAAAT CTAATCAGTT AAGTTAGCAA TTGAAGACCT GCAGGAATAA ATGGAGTAAA 1620
CTTTTGTAAT CTAAACTTCA CCTGCATGTT TTTTCTTTAC CCCAACCCAT TTCTTAACTG 1680
TAGGCTCAGT CTTCTCAGTA TTTGGGTTAC TGGTTCAGCA GAAGCCAGGA AAAACAATAA 1740
TTTTGTAGTA ATCAGAATGT TACTCAATTG TATATTGTTT ACTTTATTGT AAATATTGGT 1800
GAACAGTGGT CAATAAATAG TTTTATATTC CT 1833
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sah-0195 ENSSHAP00000021126.1 Sarcophilus harrisii 99 7e-70 259
WERAM-Mod-0004 ENSMODP00000000687.1 Monodelphis domestica 98 2e-69 258
WERAM-Orc-0181 ENSOCUP00000018528.2 Oryctolagus cuniculus 99 2e-69 258
WERAM-Eqc-0087 ENSECAP00000010494.1 Equus caballus 99 3e-69 258
WERAM-Dio-0056 ENSDORP00000005131.1 Dipodomys ordii 99 3e-69 258
WERAM-Ran-0076 ENSRNOP00000015828.5 Rattus norvegicus 99 3e-69 258
WERAM-Poa-0161 ENSPPYP00000019856.2 Pongo abelii 99 3e-69 258
WERAM-Pat-0159 ENSPTRP00000032477.4 Pan troglodytes 99 3e-69 258
WERAM-Otg-0188 ENSOGAP00000016528.1 Otolemur garnettii 99 3e-69 258
WERAM-Nol-0164 ENSNLEP00000018163.1 Nomascus leucogenys 99 3e-69 258
WERAM-Myl-0086 ENSMLUP00000006919.2 Myotis lucifugus 99 3e-69 258
WERAM-Mum-0104 ENSMUSP00000031862.7 Mus musculus 99 3e-69 258
WERAM-Ict-0062 ENSSTOP00000005562.2 Ictidomys tridecemlineatus 99 3e-69 258
WERAM-Hos-0103 ENSP00000379670.2 Homo sapiens 99 3e-69 258
WERAM-Gog-0213 ENSGGOP00000019678.1 Gorilla gorilla 99 3e-69 258
WERAM-Fec-0151 ENSFCAP00000014123.2 Felis catus 99 3e-69 258
WERAM-Chh-0115 ENSCHOP00000012258.1 Choloepus hoffmanni 99 3e-69 258
WERAM-Cap-0200 ENSCPOP00000019328.1 Cavia porcellus 99 3e-69 258
WERAM-Caf-0036 ENSCAFP00000004286.3 Canis familiaris 99 3e-69 258
WERAM-Caj-0087 ENSCJAP00000014705.1 Callithrix jacchus 99 3e-69 258
WERAM-Prc-0049 ENSPCAP00000004565.1 Procavia capensis 99 3e-69 258
WERAM-Loa-0077 ENSLAFP00000005800.3 Loxodonta africana 99 3e-69 258
WERAM-Soa-0076 ENSSARP00000007237.1 Sorex araneus 99 3e-69 257
WERAM-Tut-0010 ENSTTRP00000000670.1 Tursiops truncatus 99 6e-69 256
WERAM-Mam-0052 ENSMMUP00000008960.2 Macaca mulatta 99 1e-68 256
WERAM-Dan-0199 ENSDNOP00000027320.1 Dasypus novemcinctus 99 1e-68 256
WERAM-Mim-0066 ENSMICP00000006372.1 Microcebus murinus 99 2e-68 255
WERAM-Aim-0219 ENSAMEP00000020568.1 Ailuropoda melanoleuca 98 2e-68 255
WERAM-Ora-0086 ENSOANP00000014578.2 Ornithorhynchus anatinus 97 2e-68 254
WERAM-Vip-0106 ENSVPAP00000009695.1 Vicugna pacos 94 6e-68 253
WERAM-Chs-0175 ENSCSAP00000010317.1 Chlorocebus sabaeus 98 1e-67 253
WERAM-Ocp-0110 ENSOPRP00000010669.1 Ochotona princeps 100 1e-67 252
WERAM-Pes-0009 ENSPSIP00000002734.1 Pelodiscus sinensis 97 2e-67 251
WERAM-Ova-0106 ENSOARP00000010784.1 Ovis aries 98 2e-67 251
WERAM-Mup-0215 ENSMPUP00000018538.1 Mustela putorius furo 98 2e-67 251
WERAM-Ptv-0057 ENSPVAP00000005952.1 Pteropus vampyrus 99 3e-67 251
WERAM-Tas-0077 ENSTSYP00000007470.1 Tarsius syrichta 99 4e-67 251
WERAM-Tag-0045 ENSTGUP00000002967.1 Taeniopygia guttata 96 1e-66 249
WERAM-Meg-0109 ENSMGAP00000011085.1 Meleagris gallopavo 96 1e-66 249
WERAM-Anp-0098 ENSAPLP00000011741.1 Anas platyrhynchos 96 1e-66 249
WERAM-Anc-0137 ENSACAP00000012734.2 Anolis carolinensis 93 2e-66 248
WERAM-Gaga-0108 ENSGALP00000017958.3 Gallus gallus 97 6e-65 243
WERAM-Fia-0115 ENSFALP00000009927.1 Ficedula albicollis 97 6e-65 243
WERAM-Xet-0081 ENSXETP00000026572.3 Xenopus tropicalis 91 9e-63 236
WERAM-Bot-0058 ENSBTAP00000007283.4 Bos taurus 90 9e-62 233
WERAM-Leo-0115 ENSLOCP00000014443.1 Lepisosteus oculatus 83 5e-58 220
WERAM-Pof-0032 ENSPFOP00000002567.2 Poecilia formosa 74 9e-58 219
WERAM-Xim-0006 ENSXMAP00000001021.1 Xiphophorus maculatus 74 3e-57 218
WERAM-Orn-0050 ENSONIP00000005779.1 Oreochromis niloticus 74 6e-57 216
WERAM-Dar-0007 ENSDARP00000009789.7 Danio rerio 77 7e-57 216
WERAM-Gaa-0070 ENSGACP00000009362.1 Gasterosteus aculeatus 73 2e-56 214
WERAM-Gam-0140 ENSGMOP00000014229.1 Gadus morhua 73 5e-56 214
WERAM-Tar-0197 ENSTRUP00000040634.1 Takifugu rubripes 74 1e-55 213
WERAM-Paa-0176 ENSPANP00000020092.1 Papio anubis 67 6e-52 200
WERAM-Asm-0160 ENSAMXP00000015994.1 Astyanax mexicanus 67 6e-52 200
WERAM-Lac-0097 ENSLACP00000012217.1 Latimeria chalumnae 65 4e-51 197
WERAM-Orla-0051 ENSORLP00000006270.1 Oryzias latipes 69 3e-50 194
WERAM-Ect-0002 ENSETEP00000000152.1 Echinops telfairi 70 6e-50 194
WERAM-Tub-0117 ENSTBEP00000012952.1 Tupaia belangeri 70 9e-50 193
WERAM-Ere-0053 ENSEEUP00000004419.1 Erinaceus europaeus 70 3e-49 191
WERAM-Ten-0119 ENSTNIP00000002974.1 Tetraodon nigroviridis 65 4e-49 191
WERAM-Pem-0087 ENSPMAP00000009118.1 Petromyzon marinus 63 2e-48 189
WERAM-Mae-0074 ENSMEUP00000007510.1 Macropus eugenii 56 4e-41 164
WERAM-Cii-0080 ENSCINP00000030026.1 Ciona intestinalis 53 2e-39 159
WERAM-Drm-0034 FBpp0071221 Drosophila melanogaster 54 3e-37 151
WERAM-Cis-0006 ENSCSAVP00000000838.1 Ciona savignyi 68 4e-24 107
Created Date 25-Jun-2016