WERAM Information


Tag Content
WERAM ID WERAM-Loa-0077
Ensembl Protein ID ENSLAFP00000005800.3
Gene Name CBX3
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLAFG00000006907.3 ENSLAFT00000006905.3 ENSLAFP00000005800.3
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader Chromodomain 2.20e-18 66.4 30 169
Me_Reader DCD 2.40e-35 107.5 32 81
Organism Loxodonta africana
Domain Profile
  Me_Reader Chromodomain

      Chromodomain.txt  1 FeverivdkkelrkgeveYlVrWkGynksddtWepeenLlckelleefekkkek 54
F ve+++ ++++ +g+veY+ +WkG+++ d+tWepeenL c+el+e+f + ++
ENSLAFP00000005800.3 30 FVVEKVL-DRRVVNGKVEYFLKWKGFTDADNTWEPEENLDCPELIEAFLNSQKA 82
78*****.9**************************************9765544 PP
Chromodomain.txt 13 rkgeveYlVrWkGynksddtWepeenLlckelleefek 50
ge +l +Wk ++ d e n++c++++ +f +
ENSLAFP00000005800.3 132 SSGELMFLMKWKDSDEADLVLAKEANMKCPQIVIAFYE 169
56788899999988877777778888889888888866 PP

  Me_Reader DCD

          Chromo-2.txt  3 verIinhsvdkkGelhyLikWkdlpYdeaswesatvenkkypqlvqsfyeere 55
ve++++ +G+++y++kWk+ a+ + +en ++p+l+++f ++++
ENSLAFP00000005800.3 32 VEKVLDRR-VVNGKVEYFLKWKGF--TDADNTWEPEENLDCPELIEAFLNSQK 81
67777777.679***********7..77777777789***********99876 PP
Chromo-2.txt 2 mverIinhsvdkkGelhyLikWkdlpYdeaswesatvenkkypqlvqsfyeeresmrgee 61
+erIi+++ d++Gel++L+kWkd+ dea+++ a+++n+k+pq+v++fyeer+++++++
ENSLAFP00000005800.3 122 DPERIIGAT-DSSGELMFLMKWKDS--DEADLVLAKEANMKCPQIVIAFYEERLTWHSCP 178
69*******.***************..******************************987 PP

Protein Sequence
(Fasta)
MASNKTTLQK MGRKQNGKSK KVEEAEPEEF VVEKVLDRRV VNGKVEYFLK WKGFTDADNT 60
WEPEENLDCP ELIEAFLNSQ KAGKEKDGTK RKSLSDSESD DSKSKKKRDA ADKPRGFARG 120
LDPERIIGAT DSSGELMFLM KWKDSDEADL VLAKEANMKC PQIVIAFYEE RLTWHSCPED 180
EAQ 183
Nucleotide Sequence
(Fasta)
ATGGCCTCCA ATAAAACTAC ATTGCAAAAA ATGGGAAGGA AACAGAATGG AAAGAGTAAA 60
AAAGTGGAAG AGGCAGAACC TGAAGAATTT GTGGTGGAAA AAGTGCTGGA CCGACGTGTA 120
GTGAATGGGA AGGTGGAGTA TTTTCTGAAG TGGAAGGGAT TTACAGATGC TGACAATACT 180
TGGGAACCTG AAGAAAATTT AGATTGTCCA GAATTAATTG AAGCTTTTCT TAATTCTCAA 240
AAAGCTGGCA AAGAAAAAGA TGGTACAAAA AGAAAATCTT TATCTGACAG CGAGTCTGAT 300
GACAGCAAAT CTAAGAAGAA GAGAGATGCT GCTGACAAAC CAAGAGGCTT TGCCAGAGGT 360
CTTGATCCTG AGCGAATAAT TGGTGCCACA GACAGCAGTG GAGAATTAAT GTTTCTCATG 420
AAATGGAAGG ATTCCGATGA GGCAGACTTG GTGCTGGCGA AGGAGGCAAA CATGAAGTGC 480
CCTCAGATTG TCATTGCGTT TTATGAAGAG AGACTAACTT GGCATTCTTG TCCAGAAGAT 540
GAAGCTCAAT AA 553
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Prc-0049 ENSPCAP00000004565.1 Procavia capensis 100 3e-76 281
WERAM-Mod-0004 ENSMODP00000000687.1 Monodelphis domestica 98 4e-76 280
WERAM-Orc-0181 ENSOCUP00000018528.2 Oryctolagus cuniculus 99 4e-76 280
WERAM-Ran-0076 ENSRNOP00000015828.5 Rattus norvegicus 99 6e-76 280
WERAM-Poa-0161 ENSPPYP00000019856.2 Pongo abelii 99 6e-76 280
WERAM-Pat-0159 ENSPTRP00000032477.4 Pan troglodytes 99 6e-76 280
WERAM-Otg-0188 ENSOGAP00000016528.1 Otolemur garnettii 99 6e-76 280
WERAM-Nol-0164 ENSNLEP00000018163.1 Nomascus leucogenys 99 6e-76 280
WERAM-Myl-0086 ENSMLUP00000006919.2 Myotis lucifugus 99 6e-76 280
WERAM-Mum-0104 ENSMUSP00000031862.7 Mus musculus 99 6e-76 280
WERAM-Ict-0062 ENSSTOP00000005562.2 Ictidomys tridecemlineatus 99 6e-76 280
WERAM-Hos-0103 ENSP00000379670.2 Homo sapiens 99 6e-76 280
WERAM-Gog-0213 ENSGGOP00000019678.1 Gorilla gorilla 99 6e-76 280
WERAM-Fec-0151 ENSFCAP00000014123.2 Felis catus 99 6e-76 280
WERAM-Chh-0115 ENSCHOP00000012258.1 Choloepus hoffmanni 99 6e-76 280
WERAM-Cap-0200 ENSCPOP00000019328.1 Cavia porcellus 99 6e-76 280
WERAM-Caf-0036 ENSCAFP00000004286.3 Canis familiaris 99 6e-76 280
WERAM-Caj-0087 ENSCJAP00000014705.1 Callithrix jacchus 99 6e-76 280
WERAM-Eqc-0087 ENSECAP00000010494.1 Equus caballus 99 6e-76 280
WERAM-Dio-0056 ENSDORP00000005131.1 Dipodomys ordii 99 6e-76 280
WERAM-Soa-0076 ENSSARP00000007237.1 Sorex araneus 99 7e-76 280
WERAM-Tut-0010 ENSTTRP00000000670.1 Tursiops truncatus 99 1e-75 279
WERAM-Sah-0195 ENSSHAP00000021126.1 Sarcophilus harrisii 98 1e-75 278
WERAM-Dan-0199 ENSDNOP00000027320.1 Dasypus novemcinctus 99 2e-75 278
WERAM-Mam-0052 ENSMMUP00000008960.2 Macaca mulatta 99 2e-75 278
WERAM-Sus-0125 ENSSSCP00000017701.2 Sus scrofa 99 2e-75 278
WERAM-Mim-0066 ENSMICP00000006372.1 Microcebus murinus 99 3e-75 277
WERAM-Aim-0219 ENSAMEP00000020568.1 Ailuropoda melanoleuca 98 4e-75 277
WERAM-Vip-0106 ENSVPAP00000009695.1 Vicugna pacos 94 1e-74 276
WERAM-Chs-0175 ENSCSAP00000010317.1 Chlorocebus sabaeus 98 2e-74 275
WERAM-Ova-0106 ENSOARP00000010784.1 Ovis aries 98 4e-74 274
WERAM-Mup-0215 ENSMPUP00000018538.1 Mustela putorius furo 98 4e-74 274
WERAM-Ora-0086 ENSOANP00000014578.2 Ornithorhynchus anatinus 96 1e-73 272
WERAM-Tas-0077 ENSTSYP00000007470.1 Tarsius syrichta 100 1e-71 265
WERAM-Ptv-0057 ENSPVAP00000005952.1 Pteropus vampyrus 99 3e-71 264
WERAM-Ocp-0110 ENSOPRP00000010669.1 Ochotona princeps 99 1e-70 262
WERAM-Bot-0058 ENSBTAP00000007283.4 Bos taurus 90 2e-68 255
WERAM-Pes-0009 ENSPSIP00000002734.1 Pelodiscus sinensis 96 1e-67 252
WERAM-Anc-0137 ENSACAP00000012734.2 Anolis carolinensis 92 8e-67 249
WERAM-Tag-0045 ENSTGUP00000002967.1 Taeniopygia guttata 95 8e-67 249
WERAM-Meg-0109 ENSMGAP00000011085.1 Meleagris gallopavo 95 8e-67 249
WERAM-Anp-0098 ENSAPLP00000011741.1 Anas platyrhynchos 95 8e-67 249
WERAM-Gaga-0108 ENSGALP00000017958.3 Gallus gallus 96 1e-64 242
WERAM-Fia-0115 ENSFALP00000009927.1 Ficedula albicollis 96 1e-64 242
WERAM-Xet-0081 ENSXETP00000026572.3 Xenopus tropicalis 91 3e-63 238
WERAM-Leo-0115 ENSLOCP00000014443.1 Lepisosteus oculatus 83 2e-58 221
WERAM-Orn-0050 ENSONIP00000005779.1 Oreochromis niloticus 70 9e-58 219
WERAM-Gam-0140 ENSGMOP00000014229.1 Gadus morhua 72 1e-57 219
WERAM-Pof-0032 ENSPFOP00000002567.2 Poecilia formosa 69 1e-57 219
WERAM-Xim-0006 ENSXMAP00000001021.1 Xiphophorus maculatus 69 3e-57 218
WERAM-Dar-0007 ENSDARP00000009789.7 Danio rerio 71 7e-57 216
WERAM-Gaa-0070 ENSGACP00000009362.1 Gasterosteus aculeatus 73 1e-56 215
WERAM-Tar-0197 ENSTRUP00000040634.1 Takifugu rubripes 74 8e-56 213
WERAM-Ect-0133 ENSETEP00000015100.1 Echinops telfairi 82 4e-54 207
WERAM-Paa-0176 ENSPANP00000020092.1 Papio anubis 67 3e-52 201
WERAM-Asm-0160 ENSAMXP00000015994.1 Astyanax mexicanus 67 5e-52 201
WERAM-Lac-0097 ENSLACP00000012217.1 Latimeria chalumnae 65 3e-51 198
WERAM-Ere-0077 ENSEEUP00000006601.1 Erinaceus europaeus 69 5e-51 197
WERAM-Tub-0117 ENSTBEP00000012952.1 Tupaia belangeri 70 2e-50 195
WERAM-Orla-0051 ENSORLP00000006270.1 Oryzias latipes 66 6e-50 193
WERAM-Ten-0119 ENSTNIP00000002974.1 Tetraodon nigroviridis 65 6e-49 190
WERAM-Pem-0087 ENSPMAP00000009118.1 Petromyzon marinus 63 4e-48 187
WERAM-Mae-0074 ENSMEUP00000007510.1 Macropus eugenii 59 2e-41 165
WERAM-Cii-0080 ENSCINP00000030026.1 Ciona intestinalis 49 9e-40 160
WERAM-Drm-0034 FBpp0071221 Drosophila melanogaster 55 1e-37 153
WERAM-Cis-0006 ENSCSAVP00000000838.1 Ciona savignyi 68 4e-24 108
Created Date 25-Jun-2016