WERAM Information

Tag Content
WERAM ID WERAM-Orc-0137
Ensembl Protein ID ENSOCUP00000011774.2
Gene Name PHF1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSOCUG00000013680.2 ENSOCUT00000013683.2 ENSOCUP00000011774.2
ENSOCUG00000013680.2 ENSOCUT00000024776.1 ENSOCUP00000023243.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 6.80e-14 51.8 89 238
Me_Reader Tudor 1.00e-13 51.3 31 85
Organism Oryctolagus cuniculus
Domain Profile
  Me_Reader PHD
               PHD.txt   3 iClvCg..kddegekemvqCdeCddwfHlkCvklplsslp.eg..kswyCpsC 50 
                           +C+vC+  ++  g++ +v C++C++++H++C+ +   ++p eg  +sw+C++C
  ENSOCUP00000011774.2  89 LCCVCRseTVVPGNR-LVSCEKCRHAYHQDCHVPR-APAPgEGegTSWVCRQC 139
                           5778*6445566666.****************999.77776667789****** PP
               PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpeg...kswyCpsCk 51 
                            +C+ Cg ++e + +m+qC +C +wfH  C+++  ++l +g    ++ C  C+
  ENSOCUP00000011774.2 187 SYCY-CGGPGEWNLKMLQCRSCLQWFHEACTQCLSKPLLYGdrfYEFECCVCR 238
                           69*9.*766555567*******************88888995555666*9998 PP
  Me_Reader Tudor
             Tudor.txt  2 skvGlrVvakwssdGyfYsgkiVvkghrvesgeeyysikyedqrkwyilsLekgnrlreqyg 63
                          +++G++V+a+w+ dG+ Y g+i    ++v+s++e++++++ed++++ +  L+k+++++++ g
  ENSOCUP00000011774.2 31 LWEGQDVLARWT-DGLLYLGTI----KKVDSAREVCLVQFEDDSQFLV--LWKDISPAALPG 85
                          689*********.*********....********************77..9****9998765 PP
Protein Sequence
(Fasta)		MAQPPRLSRS SAPSLWDPAS PAPTSGPRPR LWEGQDVLAR WTDGLLYLGT IKKVDSAREV 60
CLVQFEDDSQ FLVLWKDISP AALPGEELLC CVCRSETVVP GNRLVSCEKC RHAYHQDCHV 120
PRAPAPGEGE GTSWVCRQCI FAIATKRGGA LKKGPYARAM LGMKLSLPYG LKGLDWDAGH 180
LSNRQQSYCY CGGPGEWNLK MLQCRSCLQW FHEACTQCLS KPLLYGDRFY EFECCVCRGG 240
PEKVRRLQLR WVDVAHLVLY HLSVCCKKKY FDFDREILPF TSENWDSLLL GELSDTPKGE 300
RSSKLLSALN SHKDRFISGR EIKKRKCLFG LHARTPPPVE PPTGDGAPTS FPSGQGPGGG 360
VSRPLGKRRR PEPEPLRRRQ KGKVEELGPP SAVRNQPESR EQRERARLQR ALQASVSPPS 420
PSPNQSYQGS SGYNFRPTDA RCLPSSPIRM FASFHPSAST AGTSGDGEPP DRSPLELHIG 480
FPTDIPKSAP HSMTASSSST PAPSPGLPRR SAPPSPLCRS LSPGTGGGVR GGVGYLSRGD 540
PVRVLARRVR PDGSVQYLVE WGGGGIF 567
Nucleotide Sequence
(Fasta)		ATGGCGCAGC CCCCCCGGCT GAGCCGCTCT AGTGCTCCCT CACTTTGGGA CCCGGCGTCC 60
CCTGCCCCCA CCTCAGGCCC CAGGCCTCGG CTGTGGGAGG GTCAAGATGT GCTGGCCAGA 120
TGGACTGATG GGCTGCTATA CCTGGGCACC ATCAAGAAGG TGGACAGTGC TCGGGAAGTG 180
TGTCTGGTCC AGTTTGAGGA TGATTCCCAG TTTCTGGTTC TGTGGAAAGA CATTAGCCCT 240
GCCGCCCTCC CTGGGGAGGA ACTCCTCTGT TGTGTCTGTC GATCTGAGAC CGTGGTCCCT 300
GGGAACCGCC TGGTCAGCTG TGAGAAGTGT CGCCACGCTT ATCACCAGGA CTGCCACGTT 360
CCCCGGGCCC CAGCCCCTGG AGAAGGAGAG GGCACATCCT GGGTCTGCCG CCAGTGCATC 420
TTTGCGATCG CCACCAAGAG GGGAGGGGCA CTGAAGAAGG GCCCCTATGC CAGGGCCATG 480
CTGGGTATGA AGCTGTCTCT GCCATACGGA CTGAAGGGGC TGGACTGGGA CGCCGGACAT 540
CTGAGCAACC GACAGCAGAG CTACTGCTAC TGTGGCGGCC CTGGGGAGTG GAACCTGAAA 600
ATGCTGCAGT GCCGGAGCTG CCTGCAGTGG TTCCATGAGG CCTGCACCCA GTGTCTGAGC 660
AAGCCCCTCC TCTACGGGGA CAGGTTCTAT GAATTTGAAT GCTGTGTGTG TCGGGGAGGC 720
CCTGAGAAAG TCCGACGGCT ACAGCTTCGC TGGGTGGACG TGGCCCATCT TGTCCTCTAT 780
CACCTTAGCG TCTGCTGTAA GAAGAAATAC TTTGATTTTG ACCGCGAGAT CCTCCCCTTC 840
ACCTCTGAGA ACTGGGACAG TTTGCTTCTG GGGGAGCTTT CAGACACTCC CAAGGGAGAA 900
CGTTCTTCTA AGCTGCTCTC TGCTCTTAAC AGCCACAAAG ACCGTTTCAT TTCAGGGCGG 960
GAGATCAAGA AGAGGAAATG CTTATTTGGT CTCCATGCTC GGACCCCTCC TCCTGTGGAG 1020
CCCCCTACTG GAGATGGAGC CCCCACCAGC TTCCCTTCAG GGCAGGGCCC TGGGGGAGGG 1080
GTCTCACGTC CCCTGGGGAA GCGCCGGAGG CCGGAGCCAG AGCCCCTGAG GAGGAGGCAG 1140
AAGGGGAAAG TGGAGGAGCT GGGGCCACCC TCAGCAGTGC GCAATCAGCC CGAGTCCCGG 1200
GAGCAGAGGG AGCGGGCTCG TCTGCAGAGG GCACTGCAGG CCTCAGTGTC TCCACCATCC 1260
CCCAGCCCTA ACCAGAGCTA CCAGGGCAGC AGCGGCTACA ACTTCCGGCC CACAGATGCC 1320
CGCTGCCTGC CCAGCAGCCC CATCCGGATG TTTGCCTCCT TCCACCCTTC TGCCAGCACC 1380
GCAGGGACCT CTGGGGATGG TGAACCCCCA GACAGGTCAC CCCTGGAACT TCACATTGGC 1440
TTCCCCACAG ACATCCCTAA AAGTGCCCCC CACTCGATGA CTGCCTCATC TTCCTCCACC 1500
CCAGCCCCCT CCCCAGGGCT TCCTAGACGC TCAGCACCTC CTTCTCCCCT GTGCCGTAGC 1560
TTGTCTCCTG GGACTGGGGG AGGAGTGCGG GGTGGGGTTG GCTACCTGTC CCGAGGGGAC 1620
CCTGTCCGGG TCCTTGCTCG GAGAGTACGG CCTGATGGCT CTGTGCAGTA CCTGGTTGAG 1680
TGGGGAGGAG GGGGCATCTT C 1702
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Eqc-0008 ENSECAP00000001957.1 Equus caballus 98 0.0 929
WERAM-Poa-0148 ENSPPYP00000018453.2 Pongo abelii 98 0.0 927
WERAM-Paa-0064 ENSPANP00000012434.1 Papio anubis 98 0.0 927
WERAM-Mam-0091 ENSMMUP00000013961.2 Macaca mulatta 98 0.0 927
WERAM-Chs-0116 ENSCSAP00000005846.1 Chlorocebus sabaeus 98 0.0 927
WERAM-Gog-0002 ENSGGOP00000000260.2 Gorilla gorilla 98 0.0 927
WERAM-Pat-0150 ENSPTRP00000030823.4 Pan troglodytes 98 0.0 924
WERAM-Hos-0251 ENSP00000391901.2 Homo sapiens 98 0.0 922
WERAM-Aim-0021 ENSAMEP00000001524.1 Ailuropoda melanoleuca 98 0.0 922
WERAM-Otg-0166 ENSOGAP00000013927.2 Otolemur garnettii 96 0.0 922
WERAM-Nol-0082 ENSNLEP00000010152.1 Nomascus leucogenys 98 0.0 921
WERAM-Mup-0025 ENSMPUP00000002388.1 Mustela putorius furo 98 0.0 920
WERAM-Caf-0008 ENSCAFP00000001419.3 Canis familiaris 98 0.0 918
WERAM-Mim-0052 ENSMICP00000005163.1 Microcebus murinus 96 0.0 914
WERAM-Ptv-0129 ENSPVAP00000011181.1 Pteropus vampyrus 96 0.0 914
WERAM-Ict-0029 ENSSTOP00000002201.2 Ictidomys tridecemlineatus 97 0.0 912
WERAM-Myl-0137 ENSMLUP00000010985.2 Myotis lucifugus 95 0.0 909
WERAM-Tut-0080 ENSTTRP00000006541.1 Tursiops truncatus 97 0.0 905
WERAM-Sus-0017 ENSSSCP00000001640.1 Sus scrofa 96 0.0 904
WERAM-Ran-0005 ENSRNOP00000056303.3 Rattus norvegicus 93 0.0 902
WERAM-Bot-0017 ENSBTAP00000002140.4 Bos taurus 97 0.0 901
WERAM-Dio-0028 ENSDORP00000003049.1 Dipodomys ordii 97 0.0 899
WERAM-Ova-0103 ENSOARP00000010444.1 Ovis aries 97 0.0 895
WERAM-Loa-0067 ENSLAFP00000004923.3 Loxodonta africana 94 0.0 891
WERAM-Mum-0056 ENSMUSP00000073402.5 Mus musculus 93 0.0 890
WERAM-Cap-0105 ENSCPOP00000007856.2 Cavia porcellus 95 0.0 886
WERAM-Ect-0012 ENSETEP00000000928.1 Echinops telfairi 90 0.0 865
WERAM-Tub-0048 ENSTBEP00000005679.1 Tupaia belangeri 91 0.0 833
WERAM-Sah-0021 ENSSHAP00000002201.1 Sarcophilus harrisii 86 0.0 829
WERAM-Mod-0125 ENSMODP00000017656.2 Monodelphis domestica 85 0.0 813
WERAM-Prc-0088 ENSPCAP00000007973.1 Procavia capensis 96 0.0 800
WERAM-Mae-0055 ENSMEUP00000005347.1 Macropus eugenii 84 0.0 788
WERAM-Ocp-0008 ENSOPRP00000000997.1 Ochotona princeps 79 0.0 746
WERAM-Caj-0226 ENSCJAP00000040386.2 Callithrix jacchus 97 0.0 686
WERAM-Tas-0024 ENSTSYP00000002836.1 Tarsius syrichta 98 3e-175 612
WERAM-Xet-0127 ENSXETP00000043920.3 Xenopus tropicalis 55 2e-159 559
WERAM-Soa-0099 ENSSARP00000009289.1 Sorex araneus 78 1e-145 514
WERAM-Pes-0157 ENSPSIP00000018837.1 Pelodiscus sinensis 73 4e-142 502
WERAM-Lac-0051 ENSLACP00000007137.1 Latimeria chalumnae 68 6e-130 462
WERAM-Orn-0099 ENSONIP00000010864.1 Oreochromis niloticus 65 4e-121 432
WERAM-Dar-0122 ENSDARP00000074509.5 Danio rerio 65 4e-120 429
WERAM-Pof-0011 ENSPFOP00000001244.2 Poecilia formosa 62 5e-120 429
WERAM-Gaa-0136 ENSGACP00000017361.1 Gasterosteus aculeatus 65 4e-119 426
WERAM-Asm-0233 ENSAMXP00000025318.1 Astyanax mexicanus 66 2e-118 423
WERAM-Orla-0172 ENSORLP00000020274.1 Oryzias latipes 64 3e-118 423
WERAM-Xim-0166 ENSXMAP00000013572.1 Xiphophorus maculatus 65 5e-118 422
WERAM-Gam-0074 ENSGMOP00000007773.1 Gadus morhua 64 1e-116 417
WERAM-Anc-0057 ENSACAP00000005650.3 Anolis carolinensis 55 4e-108 389
WERAM-Anp-0157 ENSAPLP00000016170.1 Anas platyrhynchos 55 6e-108 389
WERAM-Gaga-0061 ENSGALP00000009493.4 Gallus gallus 55 6e-108 389
WERAM-Meg-0085 ENSMGAP00000008238.1 Meleagris gallopavo 55 7e-108 388
WERAM-Leo-0034 ENSLOCP00000005569.1 Lepisosteus oculatus 58 9e-108 388
WERAM-Fec-0148 ENSFCAP00000013936.3 Felis catus 57 5e-107 385
WERAM-Tag-0089 ENSTGUP00000006148.1 Taeniopygia guttata 55 6e-106 382
WERAM-Fia-0031 ENSFALP00000001875.1 Ficedula albicollis 58 3e-104 376
WERAM-Tar-0222 ENSTRUP00000046767.1 Takifugu rubripes 54 1e-100 364
WERAM-Ten-0022 ENSTNIP00000005027.1 Tetraodon nigroviridis 55 1e-99 361
WERAM-Pem-0006 ENSPMAP00000000578.1 Petromyzon marinus 54 2e-99 360
WERAM-Dan-0184 ENSDNOP00000013781.3 Dasypus novemcinctus 56 6e-89 325
WERAM-Chh-0106 ENSCHOP00000011829.1 Choloepus hoffmanni 49 6e-84 309
WERAM-Ere-0085 ENSEEUP00000008196.1 Erinaceus europaeus 49 4e-80 296
WERAM-Ora-0006 ENSOANP00000000893.2 Ornithorhynchus anatinus 57 2e-75 280
WERAM-Vip-0089 ENSVPAP00000008163.1 Vicugna pacos 62 4e-49 193
WERAM-Drm-0007 FBpp0085914 Drosophila melanogaster 32 4e-41 166
WERAM-Cii-0087 ENSCINP00000031571.1 Ciona intestinalis 46 6e-17 86.7
WERAM-Cis-0011 ENSCSAVP00000001651.1 Ciona savignyi 43 2e-16 85.1
Created Date 25-Jun-2016