WERAM Information

Tag Content
WERAM ID WERAM-Sus-0017
Ensembl Protein ID ENSSSCP00000001640.1
Gene Name PHF1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSSSCG00000001511.1 ENSSSCT00000001684.1 ENSSSCP00000001640.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.00e-13 51.6 89 238
Me_Reader Tudor 1.30e-13 51.3 31 85
Organism Sus scrofa
Domain Profile
  Me_Reader PHD
               PHD.txt   3 iClvCg..kddegekemvqCdeCddwfHlkCvklplsslp.eg..kswyCpsCk 51 
                           +C+vC+  ++  g++ +v C++C++++H++C+ +   ++p eg  + w+C++C+
  ENSSSCP00000001640.1  89 LCCVCRseTVVPGNR-LVSCEKCRHAYHQDCHVPR-APAPgEGegTPWVCRQCV 140
                           5778*6445566666.****************999.77776775566******7 PP
               PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpeg...kswyCpsCk 51 
                            +C+ Cg ++e + +m+qC +C +wfH  C+++  ++l +g    ++ C  C+
  ENSSSCP00000001640.1 187 SYCY-CGGPGEWNLKMLQCRSCLQWFHEACTQCLSKPLLYGdrfYEFECCVCR 238
                           69*9.*766555567*******************88888995555666*9998 PP
  Me_Reader Tudor
             Tudor.txt  2 skvGlrVvakwssdGyfYsgkiVvkghrvesgeeyysikyedqrkwyilsLekgnrlreqyg 63
                          +++G++V+a+w+ dG+ Y g+i    ++v+s++e++++++ed++++ +  L+k+++++++ g
  ENSSSCP00000001640.1 31 LWEGQDVLARWT-DGLLYLGTI----KKVDSAREVCLVQFEDDSQFLV--LWKDISPAALPG 85
                          689*********.*********....********************77..9****9998765 PP
Protein Sequence
(Fasta)		MAQPPRLSRS AAPPLWDPAS SASTSGPRPR LWEGQDVLAR WTDGLLYLGT IKKVDSAREV 60
CLVQFEDDSQ FLVLWKDISP AALPGEELLC CVCRSETVVP GNRLVSCEKC RHAYHQDCHV 120
PRAPAPGEGE GTPWVCRQCV FAIATKRGGA LKKGPYARAM LGMKLSLPYG LKGLDWDAGH 180
LSNRQQSYCY CGGPGEWNLK MLQCRSCLQW FHEACTQCLS KPLLYGDRFY EFECCVCRGG 240
PEKVRRLQLR WVDVAHLVLY HLSVCCKKKY FDFDREILPF TSENWDSLLL GELSDTPKGE 300
RSSKLLLALN SHKDRFISGR EIKKRKCLFG LHARTPPPVE PPTGSGAPTS FPSGQGPGGG 360
VSRPLGKRRR PEPEPLRRRQ KGKLEELGPA SAVRRQPEAQ EQRERARLQR ALQASVSPPP 420
SSPNQSYQGS SGYNFRPTDA RCLPSSPIRM FASFHPSAST AGTSGDGEPP DRSPLELHIG 480
FPTDIPKSTP NSMTASSSSV PTPSPSLPRR SAPPSPLGRS LSPGTGGGVR GGAGYLSRGD 540
PVRVLARRVR PDGSVQYLVE WGGGGIF 567
Nucleotide Sequence
(Fasta)		CTTCCCCCCG CCGCCTCCTC CTGCCGCTGC CGCTGCTTTG GCTGCTGCGT CATACGCCCC 60
AGAGCTGCCG GGACGGAGGG GCTGGGCCTG GGGACCCCCG GGTCGCTGCC TGCACGCCCC 120
CCGACGCCCA GACGTGCCCT CCCGGCGCGA GGGGTTCGCC TGGGTATCCC ACGTCTGCCT 180
CTGCCCGGCT CCCGGCGGCC CCAGCTGTCA CTGGCCCCCC CAGGATGCAA TGGCACAGCC 240
CCCCCGGCTG AGCCGCTCTG CTGCCCCCCC ACTTTGGGAC CCAGCTTCCT CTGCTTCCAC 300
CTCAGGCCCC AGGCCTCGAC TTTGGGAGGG TCAAGATGTG CTGGCCAGGT GGACAGATGG 360
GCTGCTATAC TTGGGGACCA TCAAAAAGGT GGACAGTGCT CGGGAGGTGT GTCTGGTCCA 420
GTTTGAGGAT GATTCCCAGT TTCTGGTTCT ATGGAAAGAC ATTAGCCCTG CTGCCCTCCC 480
TGGGGAGGAA CTCCTCTGCT GTGTATGTCG CTCTGAGACT GTGGTCCCTG GAAATCGGCT 540
GGTCAGCTGT GAAAAGTGTC GCCATGCTTA TCACCAGGAT TGCCACGTGC CAAGGGCCCC 600
AGCCCCCGGA GAGGGAGAGG GCACACCCTG GGTCTGCCGC CAGTGCGTCT TTGCCATCGC 660
CACCAAGAGA GGCGGTGCCC TGAAGAAGGG CCCCTATGCC CGGGCCATGC TGGGCATGAA 720
GCTCTCTCTG CCGTACGGAC TAAAGGGCTT GGACTGGGAT GCAGGGCATC TGAGCAACCG 780
GCAGCAGAGC TACTGTTACT GTGGTGGCCC TGGGGAATGG AACCTGAAGA TGCTGCAGTG 840
CCGGAGCTGC CTGCAGTGGT TCCATGAGGC CTGCACCCAG TGTTTGAGCA AGCCGCTCCT 900
CTATGGGGAC AGATTCTATG AGTTTGAATG CTGTGTGTGT CGGGGGGGCC CTGAGAAGGT 960
CCGGAGGTTG CAGCTTCGCT GGGTGGATGT GGCGCATCTT GTCCTCTATC ACCTCAGCGT 1020
TTGCTGTAAG AAGAAGTACT TTGATTTTGA CCGTGAGATC CTCCCCTTCA CCTCTGAGAA 1080
TTGGGACAGT TTGCTCCTTG GGGAGCTCTC TGACACCCCC AAGGGAGAAC GCTCTTCCAA 1140
GCTCCTCTTG GCTCTCAACA GCCACAAGGA CCGTTTCATT TCAGGGAGGG AGATTAAGAA 1200
GAGGAAATGC TTGTTTGGCC TCCATGCTCG GACCCCTCCC CCCGTGGAGC CCCCAACTGG 1260
CAGTGGAGCC CCCACCAGCT TCCCTTCAGG GCAGGGCCCT GGGGGAGGGG TCTCACGTCC 1320
CCTGGGGAAG CGCCGGAGGC CGGAGCCAGA GCCCCTGAGG AGGAGGCAGA AGGGGAAACT 1380
GGAGGAGCTG GGGCCAGCCT CAGCAGTGCG CCGTCAGCCC GAGGCCCAGG AGCAGAGGGA 1440
GCGGGCTCGT CTGCAGAGGG CGCTGCAGGC TTCAGTGTCT CCACCGCCCT CCAGCCCTAA 1500
CCAGAGTTAC CAGGGCAGCA GCGGCTACAA CTTCCGCCCC ACGGATGCCC GCTGCCTGCC 1560
CAGCAGTCCC ATCCGGATGT TCGCTTCCTT CCACCCCTCT GCCAGCACCG CAGGGACCTC 1620
TGGGGACGGT GAACCCCCAG ACAGGTCACC CCTGGAACTT CACATTGGTT TCCCCACAGA 1680
CATCCCCAAA AGCACCCCCA ACTCGATGAC TGCCTCATCC TCCTCAGTCC CAACCCCCTC 1740
CCCAAGTCTT CCTAGACGCT CAGCACCTCC TTCTCCCCTG GGCCGCAGTT TGTCTCCTGG 1800
GACTGGGGGA GGAGTCCGAG GCGGGGCTGG CTACCTGTCC CGAGGGGACC CCGTCCGGGT 1860
CCTGGCTCGG AGAGTGCGGC CCGATGGCTC TGTGCAGTAC CTGGTTGAGT GGGGAGGTGG 1920
GGGCATCTTC TGAACAGCTT GCCTCTGCCT GCTTCCCCAT TCACACACGC CGGCACTTTC 1980
ATACCCTGAC CTCTGACCTC ACCTACAGCT GGGATGTACC TGGGGCGGTA GCGGGTACTT 2040
CTCTCTGCTG CCCAGGCTGG AATCCAGGCG GGGAGGTCGG GGAAGAGGCC CTCTCTTCTC 2100
CACCCCCTTT GTGATTCCTG ACCCTCTCCC CATTCCTCTT CCCATTTCCT TTGATGTTAT 2160
TTTGTTACAG CTTTTTAAAT ATTTTTTAAA ATTATTTAAC CCCTGGGACG GAGACTGAGG 2220
AGGGGAGGAG GATAAAGGAT CCTGGGCTCT GTATGATTGA AATAAAGATA CATGAACAAA 2280
CTCA 2285
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Eqc-0008 ENSECAP00000001957.1 Equus caballus 96 0.0 884
WERAM-Orc-0137 ENSOCUP00000011774.2 Oryctolagus cuniculus 96 0.0 884
WERAM-Aim-0021 ENSAMEP00000001524.1 Ailuropoda melanoleuca 96 0.0 882
WERAM-Myl-0137 ENSMLUP00000010985.2 Myotis lucifugus 93 0.0 879
WERAM-Ptv-0129 ENSPVAP00000011181.1 Pteropus vampyrus 95 0.0 877
WERAM-Poa-0148 ENSPPYP00000018453.2 Pongo abelii 96 0.0 876
WERAM-Gog-0002 ENSGGOP00000000260.2 Gorilla gorilla 96 0.0 876
WERAM-Pat-0150 ENSPTRP00000030823.4 Pan troglodytes 95 0.0 875
WERAM-Mup-0025 ENSMPUP00000002388.1 Mustela putorius furo 96 0.0 875
WERAM-Otg-0166 ENSOGAP00000013927.2 Otolemur garnettii 94 0.0 874
WERAM-Caf-0008 ENSCAFP00000001419.3 Canis familiaris 96 0.0 874
WERAM-Ict-0029 ENSSTOP00000002201.2 Ictidomys tridecemlineatus 95 0.0 873
WERAM-Paa-0064 ENSPANP00000012434.1 Papio anubis 95 0.0 873
WERAM-Mam-0091 ENSMMUP00000013961.2 Macaca mulatta 95 0.0 873
WERAM-Chs-0116 ENSCSAP00000005846.1 Chlorocebus sabaeus 95 0.0 873
WERAM-Hos-0251 ENSP00000391901.2 Homo sapiens 95 0.0 871
WERAM-Nol-0082 ENSNLEP00000010152.1 Nomascus leucogenys 95 0.0 870
WERAM-Ran-0005 ENSRNOP00000056303.3 Rattus norvegicus 91 0.0 863
WERAM-Tut-0080 ENSTTRP00000006541.1 Tursiops truncatus 96 0.0 862
WERAM-Mim-0052 ENSMICP00000005163.1 Microcebus murinus 90 0.0 860
WERAM-Bot-0017 ENSBTAP00000002140.4 Bos taurus 96 0.0 858
WERAM-Dio-0028 ENSDORP00000003049.1 Dipodomys ordii 94 0.0 854
WERAM-Cap-0105 ENSCPOP00000007856.2 Cavia porcellus 94 0.0 853
WERAM-Ova-0103 ENSOARP00000010444.1 Ovis aries 96 0.0 852
WERAM-Mum-0056 ENSMUSP00000073402.5 Mus musculus 90 0.0 852
WERAM-Loa-0067 ENSLAFP00000004923.3 Loxodonta africana 91 0.0 847
WERAM-Ect-0012 ENSETEP00000000928.1 Echinops telfairi 87 0.0 839
WERAM-Prc-0088 ENSPCAP00000007973.1 Procavia capensis 95 0.0 810
WERAM-Sah-0021 ENSSHAP00000002201.1 Sarcophilus harrisii 85 0.0 795
WERAM-Tub-0048 ENSTBEP00000005679.1 Tupaia belangeri 89 0.0 788
WERAM-Ocp-0008 ENSOPRP00000000997.1 Ochotona princeps 81 0.0 706
WERAM-Mae-0055 ENSMEUP00000005347.1 Macropus eugenii 93 0.0 696
WERAM-Caj-0226 ENSCJAP00000040386.2 Callithrix jacchus 96 0.0 695
WERAM-Mod-0125 ENSMODP00000017656.2 Monodelphis domestica 91 0.0 684
WERAM-Tas-0024 ENSTSYP00000002836.1 Tarsius syrichta 97 1e-178 623
WERAM-Xet-0127 ENSXETP00000043920.3 Xenopus tropicalis 61 5e-151 531
WERAM-Soa-0099 ENSSARP00000009289.1 Sorex araneus 77 3e-148 523
WERAM-Pes-0157 ENSPSIP00000018837.1 Pelodiscus sinensis 72 2e-141 500
WERAM-Lac-0051 ENSLACP00000007137.1 Latimeria chalumnae 66 9e-130 461
WERAM-Orn-0099 ENSONIP00000010864.1 Oreochromis niloticus 62 3e-120 429
WERAM-Pof-0011 ENSPFOP00000001244.2 Poecilia formosa 62 2e-119 427
WERAM-Dar-0122 ENSDARP00000074509.5 Danio rerio 65 2e-119 426
WERAM-Gaa-0136 ENSGACP00000017361.1 Gasterosteus aculeatus 66 9e-118 421
WERAM-Orla-0172 ENSORLP00000020274.1 Oryzias latipes 64 1e-117 421
WERAM-Asm-0233 ENSAMXP00000025318.1 Astyanax mexicanus 66 1e-117 421
WERAM-Xim-0166 ENSXMAP00000013572.1 Xiphophorus maculatus 65 3e-117 419
WERAM-Gam-0074 ENSGMOP00000007773.1 Gadus morhua 65 5e-116 415
WERAM-Gaga-0061 ENSGALP00000009493.4 Gallus gallus 54 1e-108 390
WERAM-Anc-0057 ENSACAP00000005650.3 Anolis carolinensis 54 1e-108 390
WERAM-Meg-0085 ENSMGAP00000008238.1 Meleagris gallopavo 54 1e-108 390
WERAM-Anp-0157 ENSAPLP00000016170.1 Anas platyrhynchos 56 4e-108 389
WERAM-Leo-0034 ENSLOCP00000005569.1 Lepisosteus oculatus 59 2e-107 387
WERAM-Fec-0148 ENSFCAP00000013936.3 Felis catus 55 3e-107 386
WERAM-Tag-0089 ENSTGUP00000006148.1 Taeniopygia guttata 53 3e-106 383
WERAM-Fia-0031 ENSFALP00000001875.1 Ficedula albicollis 58 7e-105 378
WERAM-Tar-0222 ENSTRUP00000046767.1 Takifugu rubripes 54 1e-101 367
WERAM-Ten-0022 ENSTNIP00000005027.1 Tetraodon nigroviridis 56 1e-100 364
WERAM-Pem-0006 ENSPMAP00000000578.1 Petromyzon marinus 53 4e-98 356
WERAM-Dan-0184 ENSDNOP00000013781.3 Dasypus novemcinctus 57 3e-89 326
WERAM-Chh-0106 ENSCHOP00000011829.1 Choloepus hoffmanni 48 6e-84 309
WERAM-Ere-0085 ENSEEUP00000008196.1 Erinaceus europaeus 49 9e-81 298
WERAM-Ora-0006 ENSOANP00000000893.2 Ornithorhynchus anatinus 57 3e-76 283
WERAM-Vip-0089 ENSVPAP00000008163.1 Vicugna pacos 58 5e-49 193
WERAM-Drm-0007 FBpp0085914 Drosophila melanogaster 32 4e-41 167
WERAM-Cii-0087 ENSCINP00000031571.1 Ciona intestinalis 46 6e-17 86.7
WERAM-Cis-0011 ENSCSAVP00000001651.1 Ciona savignyi 43 2e-16 85.1
Created Date 25-Jun-2016