Tag |
Content |
WERAM ID |
WERAM-Orc-0010 |
Ensembl Protein ID |
ENSOCUP00000001013.2 |
Gene Name |
KDM1A |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDM |
LSD1_KDM1 |
1.00e-211 |
704.8 |
179 |
807 |
|
Organism |
Oryctolagus cuniculus |
Domain Profile |
HDM LSD1_KDM1
LSD1.txt 163 laesenkleeklqllvaelksfvylssrdkkiLsws.lavael.envyPlstldl 215 + + + ++e +lq l+a +s+ l r + +L+ + l + + + + Pl t ++ ENSOCUP00000001013.2 179 NPKIQLTFEATLQQLEAPYNSDTVLVHRVHSYLERHgLINFGIyKRIKPLPTKKT 233 5567889999**************9999999999874444433467777766655 PP LSD1.txt 1 lppkvvilEAkeRvGGri..yskavpvsdleasevsslasnsnavssksvnlelkkvkdkstldsdpLyelssqqlslekvemveref. 86 ++++v++lEA++RvGGr+ ++k+++v+dl+a++v++l++n++av+sk+vn+el+k+k+k+ pLye+++q++++ek+emve+ef ENSOCUP00000001013.2 255 FGMDVTLLEARDRVGGRVatFRKGNYVADLGAMVVTGLGGNPMAVVSKQVNMELAKIKQKC-----PLYEANGQAVPKEKDEMVEQEFn 338 79***********************************************************.....*********************** PP LSD1.txt 87 ........vlheldtkvld............vvevqklfvlfeklleyvkvvkskeelkelinkeeslkikileqiqly.......... 145 ++h+ld++vl+ v+++q+++v++e++++++k+vk++eelkel+nk+++lk+ki+e++q+y ENSOCUP00000001013.2 339 rlleatsyLSHQLDFNVLNnkpvslgqalevVIQLQEKHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKIKELHQQYkeaaevkppr 427 ***************************************************************************************** PP LSD1.txt 146 .isiEalpkslkkdLsel......laesenkleeklqllvaelksfvylssrdkkiLswslavaelenvyPlstldl.......dlell 220 i++E+l+ks+++dL++l lae+++kleeklq+l+a+++s+vylssrd++iL+w++a++e++n++Plstl+l d+e++ ENSOCUP00000001013.2 428 dITAEFLVKSKHRDLTALckeydeLAETQGKLEEKLQELEANPPSDVYLSSRDRQILDWHFANLEFANATPLSTLSLkhwdqddDFEFT 516 ***************************************************************************************** PP LSD1.txt 221 gekvavrrGlsdlpvaLastPspLdiklekavrkvkleddkvelsavness......ykvDkvvialpldklksq..lieFePpLpefk 301 g++++vr+G+s++pvaLa ++Ldikl++avr+v+++++++e++avn++s yk+D+v+++lpl++lk+q +++F+PpLpe+k ENSOCUP00000001013.2 517 GSHLTVRNGYSCVPVALA---EGLDIKLNTAVRQVRYTASGCEVIAVNTRStsqtfiYKCDAVLCTLPLGVLKQQppAVQFVPPLPEWK 602 ******************...******************************************************************** PP LSD1.txt 302 tkaikridFknlkKviLifkaaFWepnislFGsvpkstarelifdevlrfwnllkePiLlalvkveaidimenisddviqglvsailkv 390 t+a++r++F+nl+Kv+L+f+++FW+p+++lFG+v+++ta++ +e+++fwnl+k+PiLlalv++ea++imenisddvi+g+++ailk+ ENSOCUP00000001013.2 603 TSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASR---GELFLFWNLYKAPILLALVAGEAAGIMENISDDVIVGRCLAILKG 688 *****************************************...********************************************* PP LSD1.txt 391 ikgkseaadpletvvsnWeadslt 414 i+g+s++++p+etvvs+W+ad ++ ENSOCUP00000001013.2 689 IFGSSAVPQPKETVVSRWRADPWA 712 ********************8654 PP LSD1.txt 537 lLvaellgpsPepPskPsanPyLlyqktqwhvckaladedkrrltGdstaratknevrakLgktlReldslgkqplvdeiaarReayag 625 L+a++++p+P++P++P+++P+L++ +G++t+r+++++v+++L+++lRe++++++q+l+++++++R+a++g ENSOCUP00000001013.2 729 DLMAQPITPGPSIPGAPQPIPRLFF-------------------AGEHTIRNYPATVHGALLSGLREAGRIADQFLGAMYTLPRQATPG 798 59***********************...................********************************************* PP LSD1.txt 626 klaeyqrsi 634 ++a++++s+ ENSOCUP00000001013.2 799 VPAQQSPSM 807 ******997 PP
|
Protein Sequence (Fasta) | PRPSPCSKAA QPPGSAGPQA GPTVVPGSAT PMETGIAETP EGRRTSRRKR AKVEYREMDE 60 SLANLSEDEY YSEEERNAKA EKEKKLPPPP PQAPPEEENE SEPEEPSGQA GGLQDDSSGG 120 YGDGQASGVE GAAFQSRLPH DRMTSQEAAC FPDVISGPQQ TQKVFLFIRN RTLQLWLDNP 180 KIQLTFEATL QQLEAPYNSD TVLVHRVHSY LERHGLINFG IYKRIKPLPT KKTGKVIIIG 240 SGVSGLAAAR QLQSFGMDVT LLEARDRVGG RVATFRKGNY VADLGAMVVT GLGGNPMAVV 300 SKQVNMELAK IKQKCPLYEA NGQAVPKEKD EMVEQEFNRL LEATSYLSHQ LDFNVLNNKP 360 VSLGQALEVV IQLQEKHVKD EQIEHWKKIV KTQEELKELL NKMVNLKEKI KELHQQYKEA 420 AEVKPPRDIT AEFLVKSKHR DLTALCKEYD ELAETQGKLE EKLQELEANP PSDVYLSSRD 480 RQILDWHFAN LEFANATPLS TLSLKHWDQD DDFEFTGSHL TVRNGYSCVP VALAEGLDIK 540 LNTAVRQVRY TASGCEVIAV NTRSTSQTFI YKCDAVLCTL PLGVLKQQPP AVQFVPPLPE 600 WKTSAVQRMG FGNLNKVVLC FDRVFWDPSV NLFGHVGSTT ASRGELFLFW NLYKAPILLA 660 LVAGEAAGIM ENISDDVIVG RCLAILKGIF GSSAVPQPKE TVVSRWRADP WARGSYSYVA 720 AGSSGNDYDL MAQPITPGPS IPGAPQPIPR LFFAGEHTIR NYPATVHGAL LSGLREAGRI 780 ADQFLGAMYT LPRQATPGVP AQQSPSM 807Protein Fasta Sequence
>ENSOCUP00000001013.2|LSD1_KDM1|Oryctolagus cuniculus PRPSPCSKAAQPPGSAGPQAGPTVVPGSATPMETGIAETPEGRRTSRRKRAKVEYREMDESLANLSEDEYYSEEERNAKAEKEKKLPPPPPQAPPEEENESEPEEPSGQAGGLQDDSSGGYGDGQASGVEGAAFQSRLPHDRMTSQEAACFPDVISGPQQTQKVFLFIRNRTLQLWLDNPKIQLTFEATLQQLEAPYNSDTVLVHRVHSYLERHGLINFGIYKRIKPLPTKKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRKGNYVADLGAMVVTGLGGNPMAVVSKQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLNNKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKIKELHQQYKEAAEVKPPRDITAEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQELEANPPSDVYLSSRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLGAMYTLPRQATPGVPAQQSPSM
|
Nucleotide Sequence (Fasta) | CCACGGCCTT CTCCCTGCTC TAAAGCAGCC CAGCCCCCAG GNTCCGCGGG GCCTCAGGCC 60 GGGCCTACCG TCGTGCCCGG GTCCGCGACC CCCATGGAAA CGGGAATAGC GGAGACTCCG 120 GAGGGGCGAC GGACCAGCCG GCGCAAGCGA GCAAAGGTAG AGTACAGAGA GATGGACGAG 180 AGCCTGGCCA ACCTCTCGGA AGACGAGTAT TACTCAGAAG AAGAGCGGAA TGCTAAAGCA 240 GAGAAGGAGA AGAAGCTCCC CCCGCCGCCC CCTCAAGCCC CGCCAGAGGA GGAAAATGAG 300 AGTGAGCCTG AAGAGCCGTC TGGGCAAGCA GGAGGACTTC AAGACGACAG TTCTGGAGGG 360 TATGGAGACG GCCAAGCATC AGGTGTGGAG GGTGCCGCTT TCCAGAGCAG ACTCCCTCAT 420 GACCGCATGA CTTCTCAAGA AGCAGCCTGC TTCCCGGATG TCATCAGTGG ACCACAGCAG 480 ACCCAGAAGG TCTTTCTGTT CATTAGAAAC CGCACATTGC AGTTGTGGTT GGATAATCCA 540 AAGATTCAGC TGACATTCGA GGCTACTCTG CAGCAGCTAG AGGCGCCGTA TAACAGTGAT 600 ACTGTGCTTG TCCACCGAGT CCACAGCTAC TTAGAACGCC ATGGCCTCAT CAACTTCGGC 660 ATCTATAAGA GAATAAAACC CTTGCCAACT AAAAAGACAG GAAAGGTAAT TATTATAGGC 720 TCTGGAGTCT CAGGCTTGGC AGCAGCTCGA CAGTTACAAA GTTTTGGAAT GGATGTTACG 780 CTTCTGGAAG CCAGGGATCG TGTGGGCGGA CGAGTCGCTA CATTTCGCAA AGGAAACTAT 840 GTAGCTGATT TAGGAGCCAT GGTAGTAACA GGTCTTGGAG GGAATCCCAT GGCTGTGGTC 900 AGCAAACAAG TAAATATGGA ACTGGCCAAG ATCAAGCAAA AATGCCCACT TTATGAAGCC 960 AATGGACAAG CTGTTCCTAA AGAGAAGGAT GAAATGGTAG AACAAGAGTT TAACCGGCTG 1020 CTAGAAGCTA CATCTTACCT AAGTCATCAG CTAGACTTCA ATGTCCTCAA TAATAAGCCT 1080 GTGTCCCTTG GCCAGGCTCT GGAAGTTGTC ATTCAGTTAC AAGAAAAACA TGTCAAAGAT 1140 GAGCAGATTG AACATTGGAA GAAGATAGTG AAGACTCAGG AAGAATTGAA AGAACTTCTT 1200 AATAAGATGG TAAATTTGAA AGAGAAAATT AAAGAACTCC ATCAGCAGTA CAAAGAAGCA 1260 GCTGAAGTGA AGCCACCCAG AGACATTACT GCCGAGTTCT TGGTGAAAAG CAAGCACAGG 1320 GATCTGACTG CTCTCTGCAA GGAATATGAT GAATTGGCTG AAACTCAAGG AAAGCTAGAA 1380 GAGAAACTTC AAGAATTGGA AGCTAATCCT CCAAGTGATG TATATCTCTC ATCAAGAGAC 1440 AGACAAATAC TTGATTGGCA CTTTGCAAAC CTTGAATTTG CTAATGCCAC ACCGCTGTCT 1500 ACCCTCTCCC TTAAACATTG GGATCAGGAT GATGACTTTG AGTTTACTGG CAGCCACCTG 1560 ACAGTGAGGA ACGGCTACTC CTGCGTGCCC GTGGCGTTAG CAGAAGGCCT GGACATCAAA 1620 CTGAATACAG CCGTGCGCCA GGTCCGCTAC ACAGCTTCAG GGTGTGAAGT GATCGCGGTG 1680 AACACCCGCT CCACCAGTCA GACGTTCATT TACAAGTGCG ACGCGGTGCT CTGCACCCTC 1740 CCCCTGGGCG TGCTCAAGCA GCAGCCGCCA GCCGTCCAGT TTGTGCCCCC GCTCCCCGAG 1800 TGGAAGACGT CCGCCGTGCA GAGGATGGGG TTCGGCAACC TGAACAAGGT GGTGTTGTGT 1860 TTCGACCGGG TGTTCTGGGA CCCGAGTGTC AATCTGTTTG GCCACGTTGG CAGCACAACG 1920 GCCAGCAGGG GCGAGCTCTT CCTCTTCTGG AACCTCTACA AAGCTCCGAT ACTGCTGGCC 1980 CTGGTGGCAG GAGAAGCTGC TGGCATCATG GAAAACATAA GCGACGACGT CATTGTTGGC 2040 CGATGCCTGG CCATCCTTAA AGGCATTTTT GGTAGCAGTG CCGTGCCCCA GCCCAAGGAA 2100 ACAGTGGTGT CTCGTTGGCG TGCGGATCCC TGGGCCCGGG GCTCCTATTC CTACGTCGCT 2160 GCAGGGTCGT CTGGCAATGA CTATGATTTA ATGGCTCAGC CAATCACTCC TGGCCCTTCG 2220 ATTCCAGGTG CCCCACAGCC CATCCCACGA CTCTTCTTTG CGGGGGAACA CACCATCCGG 2280 AACTACCCAG CCACGGTGCA CGGTGCTCTG CTGAGCGGAC TGCGAGAAGC AGGAAGGATC 2340 GCGGACCAGT TCCTAGGGGC CATGTACACC CTGCCTCGCC AGGCGACGCC GGGCGTCCCC 2400 GCACAGCAGT CCCCGAGCAT G
2422Nucleotide Fasta Sequence
>ENSOCUP00000001013.2|LSD1_KDM1|Oryctolagus cuniculus CCACGGCCTTCTCCCTGCTCTAAAGCAGCCCAGCCCCCAGGNTCCGCGGGGCCTCAGGCCGGGCCTACCGTCGTGCCCGGGTCCGCGACCCCCATGGAAACGGGAATAGCGGAGACTCCGGAGGGGCGACGGACCAGCCGGCGCAAGCGAGCAAAGGTAGAGTACAGAGAGATGGACGAGAGCCTGGCCAACCTCTCGGAAGACGAGTATTACTCAGAAGAAGAGCGGAATGCTAAAGCAGAGAAGGAGAAGAAGCTCCCCCCGCCGCCCCCTCAAGCCCCGCCAGAGGAGGAAAATGAGAGTGAGCCTGAAGAGCCGTCTGGGCAAGCAGGAGGACTTCAAGACGACAGTTCTGGAGGGTATGGAGACGGCCAAGCATCAGGTGTGGAGGGTGCCGCTTTCCAGAGCAGACTCCCTCATGACCGCATGACTTCTCAAGAAGCAGCCTGCTTCCCGGATGTCATCAGTGGACCACAGCAGACCCAGAAGGTCTTTCTGTTCATTAGAAACCGCACATTGCAGTTGTGGTTGGATAATCCAAAGATTCAGCTGACATTCGAGGCTACTCTGCAGCAGCTAGAGGCGCCGTATAACAGTGATACTGTGCTTGTCCACCGAGTCCACAGCTACTTAGAACGCCATGGCCTCATCAACTTCGGCATCTATAAGAGAATAAAACCCTTGCCAACTAAAAAGACAGGAAAGGTAATTATTATAGGCTCTGGAGTCTCAGGCTTGGCAGCAGCTCGACAGTTACAAAGTTTTGGAATGGATGTTACGCTTCTGGAAGCCAGGGATCGTGTGGGCGGACGAGTCGCTACATTTCGCAAAGGAAACTATGTAGCTGATTTAGGAGCCATGGTAGTAACAGGTCTTGGAGGGAATCCCATGGCTGTGGTCAGCAAACAAGTAAATATGGAACTGGCCAAGATCAAGCAAAAATGCCCACTTTATGAAGCCAATGGACAAGCTGTTCCTAAAGAGAAGGATGAAATGGTAGAACAAGAGTTTAACCGGCTGCTAGAAGCTACATCTTACCTAAGTCATCAGCTAGACTTCAATGTCCTCAATAATAAGCCTGTGTCCCTTGGCCAGGCTCTGGAAGTTGTCATTCAGTTACAAGAAAAACATGTCAAAGATGAGCAGATTGAACATTGGAAGAAGATAGTGAAGACTCAGGAAGAATTGAAAGAACTTCTTAATAAGATGGTAAATTTGAAAGAGAAAATTAAAGAACTCCATCAGCAGTACAAAGAAGCAGCTGAAGTGAAGCCACCCAGAGACATTACTGCCGAGTTCTTGGTGAAAAGCAAGCACAGGGATCTGACTGCTCTCTGCAAGGAATATGATGAATTGGCTGAAACTCAAGGAAAGCTAGAAGAGAAACTTCAAGAATTGGAAGCTAATCCTCCAAGTGATGTATATCTCTCATCAAGAGACAGACAAATACTTGATTGGCACTTTGCAAACCTTGAATTTGCTAATGCCACACCGCTGTCTACCCTCTCCCTTAAACATTGGGATCAGGATGATGACTTTGAGTTTACTGGCAGCCACCTGACAGTGAGGAACGGCTACTCCTGCGTGCCCGTGGCGTTAGCAGAAGGCCTGGACATCAAACTGAATACAGCCGTGCGCCAGGTCCGCTACACAGCTTCAGGGTGTGAAGTGATCGCGGTGAACACCCGCTCCACCAGTCAGACGTTCATTTACAAGTGCGACGCGGTGCTCTGCACCCTCCCCCTGGGCGTGCTCAAGCAGCAGCCGCCAGCCGTCCAGTTTGTGCCCCCGCTCCCCGAGTGGAAGACGTCCGCCGTGCAGAGGATGGGGTTCGGCAACCTGAACAAGGTGGTGTTGTGTTTCGACCGGGTGTTCTGGGACCCGAGTGTCAATCTGTTTGGCCACGTTGGCAGCACAACGGCCAGCAGGGGCGAGCTCTTCCTCTTCTGGAACCTCTACAAAGCTCCGATACTGCTGGCCCTGGTGGCAGGAGAAGCTGCTGGCATCATGGAAAACATAAGCGACGACGTCATTGTTGGCCGATGCCTGGCCATCCTTAAAGGCATTTTTGGTAGCAGTGCCGTGCCCCAGCCCAAGGAAACAGTGGTGTCTCGTTGGCGTGCGGATCCCTGGGCCCGGGGCTCCTATTCCTACGTCGCTGCAGGGTCGTCTGGCAATGACTATGATTTAATGGCTCAGCCAATCACTCCTGGCCCTTCGATTCCAGGTGCCCCACAGCCCATCCCACGACTCTTCTTTGCGGGGGAACACACCATCCGGAACTACCCAGCCACGGTGCACGGTGCTCTGCTGAGCGGACTGCGAGAAGCAGGAAGGATCGCGGACCAGTTCCTAGGGGCCATGTACACCCTGCCTCGCCAGGCGACGCCGGGCGTCCCCGCACAGCAGTCCCCGAGCATG
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |