WERAM Information


Tag Content
WERAM ID WERAM-Orc-0010
Ensembl Protein ID ENSOCUP00000001013.2
Gene Name KDM1A
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSOCUG00000001164.3 ENSOCUT00000001166.2 ENSOCUP00000001013.2
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM LSD1_KDM1 1.00e-211 704.8 179 807
Organism Oryctolagus cuniculus
Domain Profile
  HDM LSD1_KDM1

              LSD1.txt 163 laesenkleeklqllvaelksfvylssrdkkiLsws.lavael.envyPlstldl 215
+ + + ++e +lq l+a +s+ l r + +L+ + l + + + + Pl t ++
ENSOCUP00000001013.2 179 NPKIQLTFEATLQQLEAPYNSDTVLVHRVHSYLERHgLINFGIyKRIKPLPTKKT 233
5567889999**************9999999999874444433467777766655 PP
LSD1.txt 1 lppkvvilEAkeRvGGri..yskavpvsdleasevsslasnsnavssksvnlelkkvkdkstldsdpLyelssqqlslekvemveref. 86
++++v++lEA++RvGGr+ ++k+++v+dl+a++v++l++n++av+sk+vn+el+k+k+k+ pLye+++q++++ek+emve+ef
ENSOCUP00000001013.2 255 FGMDVTLLEARDRVGGRVatFRKGNYVADLGAMVVTGLGGNPMAVVSKQVNMELAKIKQKC-----PLYEANGQAVPKEKDEMVEQEFn 338
79***********************************************************.....*********************** PP
LSD1.txt 87 ........vlheldtkvld............vvevqklfvlfeklleyvkvvkskeelkelinkeeslkikileqiqly.......... 145
++h+ld++vl+ v+++q+++v++e++++++k+vk++eelkel+nk+++lk+ki+e++q+y
ENSOCUP00000001013.2 339 rlleatsyLSHQLDFNVLNnkpvslgqalevVIQLQEKHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKIKELHQQYkeaaevkppr 427
***************************************************************************************** PP
LSD1.txt 146 .isiEalpkslkkdLsel......laesenkleeklqllvaelksfvylssrdkkiLswslavaelenvyPlstldl.......dlell 220
i++E+l+ks+++dL++l lae+++kleeklq+l+a+++s+vylssrd++iL+w++a++e++n++Plstl+l d+e++
ENSOCUP00000001013.2 428 dITAEFLVKSKHRDLTALckeydeLAETQGKLEEKLQELEANPPSDVYLSSRDRQILDWHFANLEFANATPLSTLSLkhwdqddDFEFT 516
***************************************************************************************** PP
LSD1.txt 221 gekvavrrGlsdlpvaLastPspLdiklekavrkvkleddkvelsavness......ykvDkvvialpldklksq..lieFePpLpefk 301
g++++vr+G+s++pvaLa ++Ldikl++avr+v+++++++e++avn++s yk+D+v+++lpl++lk+q +++F+PpLpe+k
ENSOCUP00000001013.2 517 GSHLTVRNGYSCVPVALA---EGLDIKLNTAVRQVRYTASGCEVIAVNTRStsqtfiYKCDAVLCTLPLGVLKQQppAVQFVPPLPEWK 602
******************...******************************************************************** PP
LSD1.txt 302 tkaikridFknlkKviLifkaaFWepnislFGsvpkstarelifdevlrfwnllkePiLlalvkveaidimenisddviqglvsailkv 390
t+a++r++F+nl+Kv+L+f+++FW+p+++lFG+v+++ta++ +e+++fwnl+k+PiLlalv++ea++imenisddvi+g+++ailk+
ENSOCUP00000001013.2 603 TSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASR---GELFLFWNLYKAPILLALVAGEAAGIMENISDDVIVGRCLAILKG 688
*****************************************...********************************************* PP
LSD1.txt 391 ikgkseaadpletvvsnWeadslt 414
i+g+s++++p+etvvs+W+ad ++
ENSOCUP00000001013.2 689 IFGSSAVPQPKETVVSRWRADPWA 712
********************8654 PP
LSD1.txt 537 lLvaellgpsPepPskPsanPyLlyqktqwhvckaladedkrrltGdstaratknevrakLgktlReldslgkqplvdeiaarReayag 625
L+a++++p+P++P++P+++P+L++ +G++t+r+++++v+++L+++lRe++++++q+l+++++++R+a++g
ENSOCUP00000001013.2 729 DLMAQPITPGPSIPGAPQPIPRLFF-------------------AGEHTIRNYPATVHGALLSGLREAGRIADQFLGAMYTLPRQATPG 798
59***********************...................********************************************* PP
LSD1.txt 626 klaeyqrsi 634
++a++++s+
ENSOCUP00000001013.2 799 VPAQQSPSM 807
******997 PP

Protein Sequence
(Fasta)
PRPSPCSKAA QPPGSAGPQA GPTVVPGSAT PMETGIAETP EGRRTSRRKR AKVEYREMDE 60
SLANLSEDEY YSEEERNAKA EKEKKLPPPP PQAPPEEENE SEPEEPSGQA GGLQDDSSGG 120
YGDGQASGVE GAAFQSRLPH DRMTSQEAAC FPDVISGPQQ TQKVFLFIRN RTLQLWLDNP 180
KIQLTFEATL QQLEAPYNSD TVLVHRVHSY LERHGLINFG IYKRIKPLPT KKTGKVIIIG 240
SGVSGLAAAR QLQSFGMDVT LLEARDRVGG RVATFRKGNY VADLGAMVVT GLGGNPMAVV 300
SKQVNMELAK IKQKCPLYEA NGQAVPKEKD EMVEQEFNRL LEATSYLSHQ LDFNVLNNKP 360
VSLGQALEVV IQLQEKHVKD EQIEHWKKIV KTQEELKELL NKMVNLKEKI KELHQQYKEA 420
AEVKPPRDIT AEFLVKSKHR DLTALCKEYD ELAETQGKLE EKLQELEANP PSDVYLSSRD 480
RQILDWHFAN LEFANATPLS TLSLKHWDQD DDFEFTGSHL TVRNGYSCVP VALAEGLDIK 540
LNTAVRQVRY TASGCEVIAV NTRSTSQTFI YKCDAVLCTL PLGVLKQQPP AVQFVPPLPE 600
WKTSAVQRMG FGNLNKVVLC FDRVFWDPSV NLFGHVGSTT ASRGELFLFW NLYKAPILLA 660
LVAGEAAGIM ENISDDVIVG RCLAILKGIF GSSAVPQPKE TVVSRWRADP WARGSYSYVA 720
AGSSGNDYDL MAQPITPGPS IPGAPQPIPR LFFAGEHTIR NYPATVHGAL LSGLREAGRI 780
ADQFLGAMYT LPRQATPGVP AQQSPSM 807
Nucleotide Sequence
(Fasta)
CCACGGCCTT CTCCCTGCTC TAAAGCAGCC CAGCCCCCAG GNTCCGCGGG GCCTCAGGCC 60
GGGCCTACCG TCGTGCCCGG GTCCGCGACC CCCATGGAAA CGGGAATAGC GGAGACTCCG 120
GAGGGGCGAC GGACCAGCCG GCGCAAGCGA GCAAAGGTAG AGTACAGAGA GATGGACGAG 180
AGCCTGGCCA ACCTCTCGGA AGACGAGTAT TACTCAGAAG AAGAGCGGAA TGCTAAAGCA 240
GAGAAGGAGA AGAAGCTCCC CCCGCCGCCC CCTCAAGCCC CGCCAGAGGA GGAAAATGAG 300
AGTGAGCCTG AAGAGCCGTC TGGGCAAGCA GGAGGACTTC AAGACGACAG TTCTGGAGGG 360
TATGGAGACG GCCAAGCATC AGGTGTGGAG GGTGCCGCTT TCCAGAGCAG ACTCCCTCAT 420
GACCGCATGA CTTCTCAAGA AGCAGCCTGC TTCCCGGATG TCATCAGTGG ACCACAGCAG 480
ACCCAGAAGG TCTTTCTGTT CATTAGAAAC CGCACATTGC AGTTGTGGTT GGATAATCCA 540
AAGATTCAGC TGACATTCGA GGCTACTCTG CAGCAGCTAG AGGCGCCGTA TAACAGTGAT 600
ACTGTGCTTG TCCACCGAGT CCACAGCTAC TTAGAACGCC ATGGCCTCAT CAACTTCGGC 660
ATCTATAAGA GAATAAAACC CTTGCCAACT AAAAAGACAG GAAAGGTAAT TATTATAGGC 720
TCTGGAGTCT CAGGCTTGGC AGCAGCTCGA CAGTTACAAA GTTTTGGAAT GGATGTTACG 780
CTTCTGGAAG CCAGGGATCG TGTGGGCGGA CGAGTCGCTA CATTTCGCAA AGGAAACTAT 840
GTAGCTGATT TAGGAGCCAT GGTAGTAACA GGTCTTGGAG GGAATCCCAT GGCTGTGGTC 900
AGCAAACAAG TAAATATGGA ACTGGCCAAG ATCAAGCAAA AATGCCCACT TTATGAAGCC 960
AATGGACAAG CTGTTCCTAA AGAGAAGGAT GAAATGGTAG AACAAGAGTT TAACCGGCTG 1020
CTAGAAGCTA CATCTTACCT AAGTCATCAG CTAGACTTCA ATGTCCTCAA TAATAAGCCT 1080
GTGTCCCTTG GCCAGGCTCT GGAAGTTGTC ATTCAGTTAC AAGAAAAACA TGTCAAAGAT 1140
GAGCAGATTG AACATTGGAA GAAGATAGTG AAGACTCAGG AAGAATTGAA AGAACTTCTT 1200
AATAAGATGG TAAATTTGAA AGAGAAAATT AAAGAACTCC ATCAGCAGTA CAAAGAAGCA 1260
GCTGAAGTGA AGCCACCCAG AGACATTACT GCCGAGTTCT TGGTGAAAAG CAAGCACAGG 1320
GATCTGACTG CTCTCTGCAA GGAATATGAT GAATTGGCTG AAACTCAAGG AAAGCTAGAA 1380
GAGAAACTTC AAGAATTGGA AGCTAATCCT CCAAGTGATG TATATCTCTC ATCAAGAGAC 1440
AGACAAATAC TTGATTGGCA CTTTGCAAAC CTTGAATTTG CTAATGCCAC ACCGCTGTCT 1500
ACCCTCTCCC TTAAACATTG GGATCAGGAT GATGACTTTG AGTTTACTGG CAGCCACCTG 1560
ACAGTGAGGA ACGGCTACTC CTGCGTGCCC GTGGCGTTAG CAGAAGGCCT GGACATCAAA 1620
CTGAATACAG CCGTGCGCCA GGTCCGCTAC ACAGCTTCAG GGTGTGAAGT GATCGCGGTG 1680
AACACCCGCT CCACCAGTCA GACGTTCATT TACAAGTGCG ACGCGGTGCT CTGCACCCTC 1740
CCCCTGGGCG TGCTCAAGCA GCAGCCGCCA GCCGTCCAGT TTGTGCCCCC GCTCCCCGAG 1800
TGGAAGACGT CCGCCGTGCA GAGGATGGGG TTCGGCAACC TGAACAAGGT GGTGTTGTGT 1860
TTCGACCGGG TGTTCTGGGA CCCGAGTGTC AATCTGTTTG GCCACGTTGG CAGCACAACG 1920
GCCAGCAGGG GCGAGCTCTT CCTCTTCTGG AACCTCTACA AAGCTCCGAT ACTGCTGGCC 1980
CTGGTGGCAG GAGAAGCTGC TGGCATCATG GAAAACATAA GCGACGACGT CATTGTTGGC 2040
CGATGCCTGG CCATCCTTAA AGGCATTTTT GGTAGCAGTG CCGTGCCCCA GCCCAAGGAA 2100
ACAGTGGTGT CTCGTTGGCG TGCGGATCCC TGGGCCCGGG GCTCCTATTC CTACGTCGCT 2160
GCAGGGTCGT CTGGCAATGA CTATGATTTA ATGGCTCAGC CAATCACTCC TGGCCCTTCG 2220
ATTCCAGGTG CCCCACAGCC CATCCCACGA CTCTTCTTTG CGGGGGAACA CACCATCCGG 2280
AACTACCCAG CCACGGTGCA CGGTGCTCTG CTGAGCGGAC TGCGAGAAGC AGGAAGGATC 2340
GCGGACCAGT TCCTAGGGGC CATGTACACC CTGCCTCGCC AGGCGACGCC GGGCGTCCCC 2400
GCACAGCAGT CCCCGAGCAT G 2422
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Aim-0167 ENSAMEP00000015737.1 Ailuropoda melanoleuca 100 0.0 1383
WERAM-Ova-0079 ENSOARP00000008285.1 Ovis aries 100 0.0 1323
WERAM-Eqc-0161 ENSECAP00000017401.1 Equus caballus 100 0.0 1323
WERAM-Myl-0119 ENSMLUP00000009662.2 Myotis lucifugus 100 0.0 1321
WERAM-Mum-0144 ENSMUSP00000111977.2 Mus musculus 100 0.0 1316
WERAM-Mam-0080 ENSMMUP00000012794.2 Macaca mulatta 100 0.0 1315
WERAM-Caf-0144 ENSCAFP00000040032.1 Canis familiaris 100 0.0 1315
WERAM-Hos-0001 ENSP00000349049.3 Homo sapiens 100 0.0 1315
WERAM-Caj-0060 ENSCJAP00000010405.2 Callithrix jacchus 100 0.0 1315
WERAM-Fec-0137 ENSFCAP00000012799.3 Felis catus 100 0.0 1313
WERAM-Scp-0022 SPBC146.09c.1:pep Schizosaccharomyces pombe 26 2e-16 85.5
Created Date 25-Jun-2016