WERAM Information


Tag Content
WERAM ID WERAM-Caj-0060
Ensembl Protein ID ENSCJAP00000010405.2
Gene Name KDM1A
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSCJAG00000005607.2 ENSCJAT00000010995.2 ENSCJAP00000010405.2
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM LSD1_KDM1 2.60e-211 704.5 224 852
Organism Callithrix jacchus
Domain Profile
  HDM LSD1_KDM1

              LSD1.txt 163 laesenkleeklqllvaelksfvylssrdkkiLsws.lavael.envyPlstldl 215
+ + + ++e +lq l+a +s+ l r + +L+ + l + + + + Pl t ++
ENSCJAP00000010405.2 224 NPKIQLTFEATLQQLEAPYNSDTVLVHRVHSYLERHgLINFGIyKRIKPLPTKKT 278
5667889999***************999999999874444433467777766655 PP
LSD1.txt 1 lppkvvilEAkeRvGGri..yskavpvsdleasevsslasnsnavssksvnlelkkvkdkstldsdpLyelssqqlslekvemveref. 86
++++v++lEA++RvGGr+ ++k+++v+dl+a++v++l++n++av+sk+vn+el+k+k+k+ pLye+++q++++ek+emve+ef
ENSCJAP00000010405.2 300 FGMDVTLLEARDRVGGRVatFRKGNYVADLGAMVVTGLGGNPMAVVSKQVNMELAKIKQKC-----PLYEANGQAVPKEKDEMVEQEFn 383
79***********************************************************.....*********************** PP
LSD1.txt 87 ........vlheldtkvld............vvevqklfvlfeklleyvkvvkskeelkelinkeeslkikileqiqly.......... 145
++h+ld++vl+ v+++q+++v++e++++++k+vk++eelkel+nk+++lk+ki+e++q+y
ENSCJAP00000010405.2 384 rlleatsyLSHQLDFNVLNnkpvslgqalevVIQLQEKHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKIKELHQQYkeasevkppr 472
***************************************************************************************** PP
LSD1.txt 146 .isiEalpkslkkdLsel......laesenkleeklqllvaelksfvylssrdkkiLswslavaelenvyPlstldl.......dlell 220
i++E+l+ks+++dL++l lae+++kleeklq+l+a+++s+vylssrd++iL+w++a++e++n++Plstl+l d+e++
ENSCJAP00000010405.2 473 dITAEFLVKSKHRDLTALckeydeLAETQGKLEEKLQELEANPPSDVYLSSRDRQILDWHFANLEFANATPLSTLSLkhwdqddDFEFT 561
***************************************************************************************** PP
LSD1.txt 221 gekvavrrGlsdlpvaLastPspLdiklekavrkvkleddkvelsavness......ykvDkvvialpldklksq..lieFePpLpefk 301
g++++vr+G+s++pvaLa ++Ldikl++avr+v+++++++e++avn++s yk+D+v+++lpl++lk+q +++F+PpLpe+k
ENSCJAP00000010405.2 562 GSHLTVRNGYSCVPVALA---EGLDIKLNTAVRQVRYTASGCEVIAVNTRStsqtfiYKCDAVLCTLPLGVLKQQppAVQFVPPLPEWK 647
******************...******************************************************************** PP
LSD1.txt 302 tkaikridFknlkKviLifkaaFWepnislFGsvpkstarelifdevlrfwnllkePiLlalvkveaidimenisddviqglvsailkv 390
t+a++r++F+nl+Kv+L+f+++FW+p+++lFG+v+++ta++ +e+++fwnl+k+PiLlalv++ea++imenisddvi+g+++ailk+
ENSCJAP00000010405.2 648 TSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASR---GELFLFWNLYKAPILLALVAGEAAGIMENISDDVIVGRCLAILKG 733
*****************************************...********************************************* PP
LSD1.txt 391 ikgkseaadpletvvsnWeadslt 414
i+g+s++++p+etvvs+W+ad ++
ENSCJAP00000010405.2 734 IFGSSAVPQPKETVVSRWRADPWA 757
********************8654 PP
LSD1.txt 537 lLvaellgpsPepPskPsanPyLlyqktqwhvckaladedkrrltGdstaratknevrakLgktlReldslgkqplvdeiaarReayag 625
L+a++++p+P++P++P+++P+L++ +G++t+r+++++v+++L+++lRe++++++q+l+++++++R+a++g
ENSCJAP00000010405.2 774 DLMAQPITPGPSIPGAPQPIPRLFF-------------------AGEHTIRNYPATVHGALLSGLREAGRIADQFLGAMYTLPRQATPG 843
59***********************...................********************************************* PP
LSD1.txt 626 klaeyqrsi 634
++a++++s+
ENSCJAP00000010405.2 844 VPAQQSPSM 852
******997 PP

Protein Sequence
(Fasta)
MLSGKKAAAA AAAAAAAAAG TEAGPGTAGS AENGSEVAAP PAGLSGPAEV GPGAAGERTP 60
RKKEPPRASP PGGLAEPPGS AGPQAGPTVV PGSATPMETG IAETPEGRRT SRRKRAKVEY 120
REMDESLANL SEDEYYSEEE RNAKAEKEKK LPPPPPQAPP EEENESEPEE PSGVEGAAFQ 180
SRLPHDRMTS QEAACFPDII SGPQQTQKVF LFIRNRTLQL WLDNPKIQLT FEATLQQLEA 240
PYNSDTVLVH RVHSYLERHG LINFGIYKRI KPLPTKKTGK VIIIGSGVSG LAAARQLQSF 300
GMDVTLLEAR DRVGGRVATF RKGNYVADLG AMVVTGLGGN PMAVVSKQVN MELAKIKQKC 360
PLYEANGQAV PKEKDEMVEQ EFNRLLEATS YLSHQLDFNV LNNKPVSLGQ ALEVVIQLQE 420
KHVKDEQIEH WKKIVKTQEE LKELLNKMVN LKEKIKELHQ QYKEASEVKP PRDITAEFLV 480
KSKHRDLTAL CKEYDELAET QGKLEEKLQE LEANPPSDVY LSSRDRQILD WHFANLEFAN 540
ATPLSTLSLK HWDQDDDFEF TGSHLTVRNG YSCVPVALAE GLDIKLNTAV RQVRYTASGC 600
EVIAVNTRST SQTFIYKCDA VLCTLPLGVL KQQPPAVQFV PPLPEWKTSA VQRMGFGNLN 660
KVVLCFDRVF WDPSVNLFGH VGSTTASRGE LFLFWNLYKA PILLALVAGE AAGIMENISD 720
DVIVGRCLAI LKGIFGSSAV PQPKETVVSR WRADPWARGS YSYVAAGSSG NDYDLMAQPI 780
TPGPSIPGAP QPIPRLFFAG EHTIRNYPAT VHGALLSGLR EAGRIADQFL GAMYTLPRQA 840
TPGVPAQQSP SM 852
Nucleotide Sequence
(Fasta)
GGCGCGGCGG GAGCGCGCTT AGCGCTTGCG TACGCGACGG CGGTTGGCGG CGCGCGGGCG 60
ACGTGAAGCG AGGCGAGTCG AGGCGGTTCG GACCCACGGA GCGACAGACC GAGCGGCCCC 120
TACGGCCGTC GGCGGCCCGG CGGCCCGAGA TGTTGTCTGG GAAGAAGGCT GCAGCCGCAG 180
CGGCGGCGGC TGCAGCGGCG GCAGCCGGGA CGGAGGCTGG CCCCGGGACT GCGGGCAGTG 240
CCGAGAACGG CTCTGAGGTG GCCGCGCCGC CCGCGGGCCT GTCGGGCCCA GCCGAGGTCG 300
GGCCGGGGGC GGCCGGGGAG CGCACGCCCC GCAAGAAAGA GCCTCCGCGG GCCTCGCCCC 360
CCGGGGGCCT GGCCGAACCG CCGGGGTCCG CAGGGCCTCA GGCCGGGCCT ACCGTCGTGC 420
CTGGGTCTGC GACCCCCATG GAAACTGGAA TAGCAGAGAC TCCGGAGGGG CGTCGGACTA 480
GCAGGCGCAA GCGGGCGAAG GTAGAGTACA GAGAGATGGA TGAAAGCTTG GCCAACCTCT 540
CAGAAGATGA GTATTATTCA GAAGAAGAGA GAAATGCTAA AGCAGAGAAG GAAAAGAAGC 600
TTCCCCCACC ACCTCCTCAA GCCCCCCCTG AGGAAGAAAA CGAAAGTGAG CCTGAAGAAC 660
CATCGGGTGT GGAGGGAGCA GCTTTCCAGA GCCGACTTCC TCATGACCGG ATGACTTCTC 720
AGGAAGCAGC CTGTTTTCCA GATATTATCA GTGGACCACA GCAGACCCAG AAAGTTTTTC 780
TGTTCATTAG AAACCGCACG TTGCAGTTGT GGTTGGATAA TCCAAAGATT CAACTGACAT 840
TTGAGGCTAC TCTCCAACAA TTAGAAGCAC CTTATAACAG TGATACTGTA CTTGTCCACC 900
GAGTTCACAG TTATTTGGAG CGTCATGGTC TTATCAACTT TGGCATCTAT AAAAGGATAA 960
AACCCCTACC AACTAAAAAG ACAGGAAAGG TAATTATTAT AGGCTCTGGG GTCTCAGGCT 1020
TGGCAGCAGC TCGACAATTA CAAAGTTTTG GAATGGATGT CACACTTTTG GAAGCCAGGG 1080
ATCGTGTGGG TGGACGAGTT GCTACGTTTC GCAAAGGAAA CTATGTAGCT GATCTTGGAG 1140
CCATGGTGGT CACAGGTCTT GGAGGGAATC CTATGGCTGT TGTCAGCAAA CAAGTAAATA 1200
TGGAACTGGC CAAGATCAAG CAAAAATGCC CACTTTATGA AGCAAACGGA CAAGCTGTTC 1260
CTAAAGAGAA AGATGAAATG GTAGAGCAAG AGTTTAACCG GTTGCTAGAA GCTACATCTT 1320
ACCTTAGTCA TCAGCTAGAC TTCAATGTCC TCAATAATAA GCCTGTGTCC CTTGGCCAGG 1380
CATTGGAAGT TGTCATTCAG TTGCAAGAAA AGCATGTCAA AGATGAACAG ATTGAACATT 1440
GGAAGAAGAT AGTGAAAACT CAGGAAGAAT TGAAAGAACT TCTTAATAAG ATGGTAAATT 1500
TGAAAGAGAA AATTAAAGAA CTCCATCAGC AATACAAAGA AGCATCTGAA GTAAAGCCAC 1560
CCAGAGACAT TACTGCCGAG TTCTTAGTGA AAAGCAAACA CAGGGATCTG ACCGCCCTAT 1620
GCAAGGAATA TGATGAATTA GCTGAAACAC AAGGAAAGCT AGAAGAAAAA CTTCAGGAAC 1680
TGGAAGCGAA TCCTCCGAGT GATGTATATC TCTCCTCAAG AGACAGACAA ATACTTGATT 1740
GGCATTTTGC AAATCTTGAA TTTGCTAATG CCACACCTCT CTCAACTCTC TCCCTTAAAC 1800
ACTGGGATCA GGATGATGAC TTTGAGTTCA CTGGCAGCCA CCTGACGGTG AGGAATGGCT 1860
ACTCATGTGT GCCTGTGGCT TTAGCAGAAG GCCTAGACAT TAAACTGAAT ACAGCAGTGC 1920
GACAGGTTCG CTACACGGCT TCAGGATGTG AAGTGATAGC TGTGAATACC CGCTCCACGA 1980
GTCAAACCTT TATTTATAAA TGCGATGCAG TTCTCTGTAC CCTTCCCCTG GGTGTGCTGA 2040
AGCAGCAGCC ACCAGCTGTT CAGTTTGTGC CACCTCTTCC TGAGTGGAAA ACATCTGCAG 2100
TCCAAAGGAT GGGATTTGGC AACCTTAACA AGGTGGTGTT GTGCTTTGAC CGGGTGTTCT 2160
GGGATCCAAG TGTCAATTTG TTTGGGCATG TTGGCAGTAC GACTGCCAGC AGGGGTGAGC 2220
TCTTCCTCTT CTGGAATCTC TATAAAGCTC CAATACTGTT GGCACTAGTG GCAGGAGAAG 2280
CTGCTGGTAT CATGGAAAAT ATAAGTGATG ATGTGATTGT TGGCCGATGC CTGGCCATTC 2340
TTAAAGGGAT TTTTGGAAGC AGTGCAGTAC CGCAGCCCAA AGAAACTGTG GTGTCTCGTT 2400
GGCGTGCTGA TCCTTGGGCC CGGGGCTCTT ATTCCTATGT TGCTGCAGGA TCATCTGGAA 2460
ATGACTATGA TTTAATGGCT CAGCCAATCA CTCCTGGCCC CTCAATTCCA GGCGCCCCAC 2520
AGCCGATTCC ACGACTCTTC TTTGCGGGAG AACATACGAT CCGTAACTAC CCAGCCACAG 2580
TGCATGGTGC TCTGCTGAGT GGGCTGCGAG AAGCAGGAAG AATTGCAGAC CAGTTTTTGG 2640
GGGCCATGTA TACACTGCCT CGCCAGGCCA CACCAGGTGT TCCTGCACAG CAGTCCCCAA 2700
GCATGTGAGA CAGATACATT GTAAGGGAAG AGACCCATGT GCTTGTCTCA ATGCTGTATA 2760
AGCAAGGCTC TTCTAGCAAT ACTAGGTCCC ACTGAGAACC TCCCACCCTG GCATCTGGGC 2820
TCCTGATTTG ACAAAGGAGC TTGTCTCCTT TGA 2854
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Mam-0080 ENSMMUP00000012794.2 Macaca mulatta 100 0.0 1467
WERAM-Caf-0144 ENSCAFP00000040032.1 Canis familiaris 100 0.0 1467
WERAM-Hos-0001 ENSP00000349049.3 Homo sapiens 100 0.0 1466
WERAM-Mum-0144 ENSMUSP00000111977.2 Mus musculus 99 0.0 1464
WERAM-Orc-0010 ENSOCUP00000001013.2 Oryctolagus cuniculus 96 0.0 1399
WERAM-Aim-0167 ENSAMEP00000015737.1 Ailuropoda melanoleuca 95 0.0 1385
WERAM-Ova-0079 ENSOARP00000008285.1 Ovis aries 100 0.0 1319
WERAM-Eqc-0161 ENSECAP00000017401.1 Equus caballus 100 0.0 1319
WERAM-Myl-0119 ENSMLUP00000009662.2 Myotis lucifugus 100 0.0 1318
WERAM-Fec-0137 ENSFCAP00000012799.3 Felis catus 100 0.0 1318
WERAM-Scp-0022 SPBC146.09c.1:pep Schizosaccharomyces pombe 26 2e-16 85.5
Created Date 25-Jun-2016