WERAM Information

Tag Content
WERAM ID WERAM-Gam-0036
Ensembl Protein ID ENSGMOP00000003620.1
Gene Name chd5
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSGMOG00000003394.1 ENSGMOT00000003728.1 ENSGMOP00000003620.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 2.10e-10 40.8 371 415
Me_Reader DCD 7.90e-28 83.3 456 506
Organism Gadus morhua
Domain Profile
  Me_Reader PHD
               PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                           ++C+vC kd+ +   +++Cd+C+  +H++C+++pl ++p+g +w+Cp+C+
  ENSGMOP00000003620.1 371 EFCRVC-KDGGE---LLCCDTCPSSYHIHCLNPPLPEIPNG-EWLCPRCM 415
                           69****.66665...9*************************.*******8 PP
  Me_Reader DCD
          Chromo-1.txt   6 vldgrvekgeveylvKWkGmsyihntWeseeqLelqcrvllrnYqkkndedeep 59 
                           +l+g +   e+e++vKW  +sy+h++W se+qLel+++v++rnYq+knd+de+p
  ENSGMOP00000003620.1 456 PLKGHP---EREFFVKWGALSYWHCSWISELQLELYHTVMYRNYQRKNDMDEPP 506
                           678888...*******************************************98 PP
          Chromo-1.txt  11 v.ekgeveylvKWkGmsyihntWes 34 
                             ++ +v yl KW+++ y   tWe 
  ENSGMOP00000003620.1 556 FdKDSDVHYLTKWRDLAYDQSTWER 580
                           2566789****************96 PP
Protein Sequence
(Fasta)		KKKTKKMKEG KMPKVKKRKK EXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 60
XXXXXXXXXX XXXXXXXXXX XXXEPKASAQ LMQEWGLEDV QYGFTEEDYT TITNYKAFSQ 120
FLRPLIAKKN PKIPMSKMMT VLGAKWREFS ANNPFKGSSA NAVAAAVAAA VETVTVTQPS 180
AASGSQPGSG LGLLKKAKTK EGKGPGVRKK SRSSKEVKRK AKPKKTKSKS GGRKKRASSS 240
EDDFLDESDF DDISVHSATV LSDTVATAAA AAKKKARRGR KKRKXXXXXX XXXXXXXXXX 300
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXE KEGIQWEAKM DEEEEEEEEE 360
VVIEEEDDHM EFCRVCKDGG ELLCCDTCPS SYHIHCLNPP LPEIPNGEWL CPRCMCPPLK 420
GKVQKILHWT WGEPPLPAQP PPGPDGAPTD PLLKPPLKGH PEREFFVKWG ALSYWHCSWI 480
SELQLELYHT VMYRNYQRKN DMDEPPPFDY GSGEEELNNE KRKSKDPQYA MMEERFYRYG 540
IKPEWLIIHR VVNHSFDKDS DVHYLTKWRD LAYDQSTWER DDFDVPDYDP QKALYWDHRE 600
QILGEDQRPL LVKRGKKLKE DHPKREIPPD APIIDPTIKF EHQPWYINAT GGTLHPYQLE 660
GLNWLRFSWA QGTDTILADE MGLGKTVQTI VFLYSLYKEG HSKGPFLVSA PLSTIINWER 720
EFELWAPDFY VVTYTGDKDS RAVIRENEFT FEDSAVKTGR KVFRMKKDTP IKFHVLLTSY 780
ELITIDQAVL GSINWACLVV DEAHRLKNNQ SKFFRILNGY KIYYKXXXXX XXXXXXXXXX 840
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 900
XXXXXXXXXX XKYYKFILTR NFEALNSKGG GNQVSLLNIM MDLKKCCNHP YLFPVASMEA 960
PVTASGSYDG NQLVKSSGKL TLMQKMMRKL KDQGHRVLIF SQMTKMLDLL EDFLEYEGYK 1020
YERIDGGITG GLRQEAIDRF NAPGAQQFCF LLSTRAGGLG INLATADTVI IYDSDWNPHN 1080
DIQAFSRAHR IGQNRKVMIY RFVTRASVEE RITEVAKRKM MLTHLVVRPG LGSKTGSMSK 1140
QELDDILKFG TEELFKDEME AARAMG 1166
Nucleotide Sequence
(Fasta)		AAGAAGAAGA CCAAGAAGAT GAAGGAGGGG AAAATGCCCA AAGTGAAGAA GAGGAAAAAG 60
GAGNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 120
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 180
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 240
NNNNNNNNNG AGCCCAAGGC GTCCGCCCAG CTGATGCAGG AATGGGGCCT GGAGGACGTG 300
CAGTACGGCT TCACCGAGGA GGACTACACC ACCATCACCA ACTACAAGGC CTTCAGCCAG 360
TTCCTCAGGC CTCTAATCGC TAAGAAGAAC CCCAAGATCC CCATGTCCAA GATGATGACC 420
GTGCTGGGGG CCAAGTGGCG CGAGTTCAGC GCCAACAACC CCTTCAAAGG GTCCTCGGCC 480
AACGCCGTGG CCGCCGCCGT GGCCGCCGCC GTGGAAACGG TTACCGTGAC GCAGCCATCA 540
GCAGCAAGCG GCAGCCAGCC GGGGTCCGGC CTGGGGCTGC TGAAGAAGGC CAAGACCAAG 600
GAGGGGAAGG GACCGGGGGT CAGGAAGAAG AGCAGGAGCT CCAAGGAGGT GAAGAGGAAG 660
GCCAAGCCCA AGAAGACCAA GTCCAAGTCT GGGGGCAGGA AGAAGAGGGC CTCTTCTAGT 720
GAGGATGACT TCCTGGATGA GTCGGACTTT GATGACATCA GCGTCCACAG CGCCACGGTG 780
CTGTCGGACA CCGTGGCAAC CGCCGCCGCC GCCGCCAAGA AGAAGGCTCG CCGAGGGAGG 840
AAGAAGAGGA AAANNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 900
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 960
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNGAG 1020
AAGGAGGGCA TCCAGTGGGA GGCCAAGATG GACGAGGAGG AGGAGGAGGA GGAGGAGGAG 1080
GTGGTGATCG AGGAGGAGGA CGACCACATG GAGTTCTGCC GCGTGTGTAA GGACGGCGGG 1140
GAGCTGCTGT GCTGCGACAC CTGTCCGTCA TCCTACCACA TCCACTGCCT GAACCCGCCC 1200
CTCCCCGAGA TCCCCAACGG GGAGTGGCTG TGTCCGCGCT GCATGTGCCC GCCGCTGAAG 1260
GGGAAGGTCC AGAAGATCCT CCACTGGACC TGGGGGGAGC CCCCGCTGCC AGCCCAGCCC 1320
CCCCCCGGCC CCGACGGCGC GCCCACCGAC CCGCTGCTCA AGCCCCCGCT GAAGGGCCAC 1380
CCCGAGAGGG AGTTCTTCGT CAAGTGGGGG GCCCTGTCCT ACTGGCACTG CTCCTGGATC 1440
AGCGAGCTGC AGCTGGAGCT CTACCACACC GTCATGTACC GCAACTACCA GCGCAAGAAC 1500
GACATGGACG AGCCCCCGCC CTTCGACTAC GGCTCTGGGG AGGAGGAGCT TAACAACGAG 1560
AAGAGGAAGA GCAAGGACCC CCAATACGCC ATGATGGAAG AGCGCTTCTA CCGCTACGGC 1620
ATCAAGCCTG AGTGGCTGAT CATCCACCGC GTGGTCAACC ACAGCTTCGA CAAGGACAGT 1680
GACGTGCACT ACCTGACCAA GTGGAGGGAC CTGGCGTACG ACCAGAGCAC CTGGGAGAGG 1740
GACGACTTCG ACGTCCCGGA CTACGACCCG CAGAAGGCCC TCTACTGGGA CCACAGAGAG 1800
CAGATACTCG GGGAGGACCA GCGCCCCCTG CTGGTCAAGA GGGGGAAGAA GTTAAAGGAA 1860
GACCATCCCA AGAGGGAAAT CCCCCCTGAC GCTCCCATCA TCGATCCCAC CATAAAGTTT 1920
GAGCACCAGC CGTGGTACAT CAACGCCACG GGGGGCACGC TGCACCCCTA CCAGCTGGAG 1980
GGGCTGAACT GGCTGCGGTT CTCCTGGGCC CAGGGCACCG ACACCATCCT GGCCGACGAG 2040
ATGGGCCTGG GCAAGACGGT CCAGACCATC GTGTTCCTGT ACTCGCTCTA CAAGGAGGGC 2100
CACTCCAAGG GCCCCTTCCT GGTGAGCGCC CCCCTCTCCA CCATCATCAA CTGGGAGCGG 2160
GAGTTTGAGC TGTGGGCGCC CGACTTCTAC GTGGTGACGT ACACGGGGGA CAAGGACAGC 2220
CGCGCTGTCA TCAGGGAGAA CGAGTTCACC TTCGAGGACA GCGCCGTCAA GACCGGCCGC 2280
AAGGTGTTCC GCATGAAGAA AGACACGCCC ATCAAGTTCC ACGTGCTGCT CACCTCGTAC 2340
GAGCTGATCA CCATCGACCA GGCGGTTCTG GGCTCCATTA ACTGGGCCTG CCTGGTGGTG 2400
GACGAGGCCC ACCGCCTCAA GAACAACCAG TCCAAGTTCT TCAGGATACT CAACGGCTAC 2460
AAGATCTACT ACAAGNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2520
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2580
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2640
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2700
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNGAAGTACT ATAAGTTCAT CCTGACGCGG 2760
AACTTTGAGG CACTGAACTC CAAGGGCGGA GGGAACCAGG TGTCGCTGCT CAACATCATG 2820
ATGGACCTGA AGAAGTGCTG CAACCACCCC TACTTGTTCC CCGTGGCGTC CATGGAAGCG 2880
CCGGTGACGG CCAGCGGCTC GTACGACGGG AACCAGCTGG TGAAGTCCTC GGGGAAGCTG 2940
ACGCTCATGC AGAAGATGAT GAGGAAGCTG AAGGACCAGG GACACCGTGT CCTCATCTTC 3000
TCCCAGATGA CCAAGATGCT GGACCTGCTG GAGGACTTCC TGGAGTACGA GGGCTACAAG 3060
TACGAGAGGA TCGACGGGGG CATCACTGGG GGGCTACGGC AGGAGGCCAT CGACCGCTTC 3120
AACGCGCCGG GTGCTCAGCA GTTCTGCTTC CTGCTGTCCA CGCGTGCGGG CGGCCTGGGA 3180
ATCAACCTGG CAACCGCCGA CACCGTCATC ATCTACGACT CTGACTGGAA CCCCCACAAC 3240
GACATACAGG CGTTCAGCCG GGCCCACCGC ATCGGGCAGA ACAGGAAGGT GATGATCTAC 3300
CGCTTCGTGA CGCGGGCCAG CGTTGAGGAG CGCATCACGG AGGTGGCCAA GAGGAAGATG 3360
ATGCTGACCC ACCTGGTGGT GCGGCCTGGC CTGGGCTCCA AGACGGGCTC CATGTCCAAG 3420
CAGGAGCTGG ACGACATCCT CAAGTTCGGC ACCGAGGAGC TCTTCAAGGA CGAGATGGAG 3480
GCGGCGCGTG CCATGGGC 3499
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orn-0005 ENSONIP00000000787.1 Oreochromis niloticus 89 0.0 869
WERAM-Xim-0182 ENSXMAP00000014720.1 Xiphophorus maculatus 89 0.0 857
WERAM-Tar-0095 ENSTRUP00000018903.1 Takifugu rubripes 89 0.0 856
WERAM-Pof-0207 ENSPFOP00000017138.2 Poecilia formosa 89 0.0 855
WERAM-Gaa-0038 ENSGACP00000005811.2 Gasterosteus aculeatus 91 0.0 845
WERAM-Asm-0087 ENSAMXP00000009172.1 Astyanax mexicanus 85 0.0 844
WERAM-Ten-0050 ENSTNIP00000006981.1 Tetraodon nigroviridis 85 0.0 840
WERAM-Dar-0239 ENSDARP00000133704.1 Danio rerio 85 0.0 833
WERAM-Leo-0039 ENSLOCP00000005985.1 Lepisosteus oculatus 85 0.0 825
WERAM-Orla-0187 ENSORLP00000021515.1 Oryzias latipes 87 0.0 814
WERAM-Pes-0048 ENSPSIP00000007224.1 Pelodiscus sinensis 78 0.0 769
WERAM-Sus-0023 ENSSSCP00000003650.2 Sus scrofa 77 0.0 766
WERAM-Otg-0071 ENSOGAP00000005103.2 Otolemur garnettii 77 0.0 764
WERAM-Nol-0109 ENSNLEP00000012582.2 Nomascus leucogenys 76 0.0 759
WERAM-Loa-0071 ENSLAFP00000005334.3 Loxodonta africana 78 0.0 759
WERAM-Sah-0203 ENSSHAP00000022021.1 Sarcophilus harrisii 77 0.0 759
WERAM-Xet-0022 ENSXETP00000006377.3 Xenopus tropicalis 76 0.0 757
WERAM-Hos-0090 ENSP00000262450.3 Homo sapiens 76 0.0 756
WERAM-Gog-0009 ENSGGOP00000000697.2 Gorilla gorilla 76 0.0 756
WERAM-Pat-0002 ENSPTRP00000000143.3 Pan troglodytes 77 0.0 756
WERAM-Chs-0008 ENSCSAP00000017274.1 Chlorocebus sabaeus 76 0.0 756
WERAM-Paa-0041 ENSPANP00000005715.1 Papio anubis 76 0.0 756
WERAM-Poa-0016 ENSPPYP00000002263.2 Pongo abelii 76 0.0 755
WERAM-Eqc-0210 ENSECAP00000022667.1 Equus caballus 77 0.0 755
WERAM-Mup-0078 ENSMPUP00000007065.1 Mustela putorius furo 76 0.0 754
WERAM-Caf-0203 ENSCAFP00000028919.3 Canis familiaris 76 0.0 753
WERAM-Gaga-0006 ENSGALP00000023295.4 Gallus gallus 77 0.0 751
WERAM-Mum-0013 ENSMUSP00000005175.4 Mus musculus 76 0.0 751
WERAM-Ran-0069 ENSRNOP00000024732.5 Rattus norvegicus 76 0.0 750
WERAM-Fia-0118 ENSFALP00000010192.1 Ficedula albicollis 77 0.0 749
WERAM-Fec-0069 ENSFCAP00000005872.3 Felis catus 76 0.0 749
WERAM-Cap-0209 ENSCPOP00000020779.1 Cavia porcellus 78 0.0 749
WERAM-Bot-0212 ENSBTAP00000010688.3 Bos taurus 76 0.0 748
WERAM-Ova-0139 ENSOARP00000014409.1 Ovis aries 76 0.0 748
WERAM-Meg-0008 ENSMGAP00000000587.2 Meleagris gallopavo 76 0.0 748
WERAM-Caj-0001 ENSCJAP00000000208.2 Callithrix jacchus 78 0.0 745
WERAM-Ict-0031 ENSSTOP00000002521.2 Ictidomys tridecemlineatus 77 0.0 743
WERAM-Dan-0195 ENSDNOP00000020423.1 Dasypus novemcinctus 75 0.0 740
WERAM-Anc-0021 ENSACAP00000002593.3 Anolis carolinensis 74 0.0 736
WERAM-Lac-0193 ENSLACP00000022264.1 Latimeria chalumnae 80 0.0 734
WERAM-Tut-0124 ENSTTRP00000009941.1 Tursiops truncatus 75 0.0 734
WERAM-Aim-0107 ENSAMEP00000010459.1 Ailuropoda melanoleuca 74 0.0 713
WERAM-Mod-0059 ENSMODP00000030757.4 Monodelphis domestica 72 0.0 711
WERAM-Dio-0100 ENSDORP00000010071.1 Dipodomys ordii 72 0.0 709
WERAM-Ocp-0105 ENSOPRP00000010147.1 Ochotona princeps 72 0.0 707
WERAM-Ptv-0176 ENSPVAP00000015426.1 Pteropus vampyrus 72 0.0 706
WERAM-Orc-0212 ENSOCUP00000018080.1 Oryctolagus cuniculus 69 0.0 706
WERAM-Tag-0164 ENSTGUP00000013727.1 Taeniopygia guttata 72 0.0 706
WERAM-Anp-0127 ENSAPLP00000014113.1 Anas platyrhynchos 72 0.0 706
WERAM-Mam-0174 ENSMMUP00000024592.2 Macaca mulatta 72 0.0 703
WERAM-Myl-0162 ENSMLUP00000013342.2 Myotis lucifugus 72 0.0 702
WERAM-Ere-0132 ENSEEUP00000013928.1 Erinaceus europaeus 72 0.0 700
WERAM-Prc-0006 ENSPCAP00000000704.1 Procavia capensis 72 0.0 699
WERAM-Mim-0084 ENSMICP00000008017.1 Microcebus murinus 72 0.0 674
WERAM-Mae-0054 ENSMEUP00000005355.1 Macropus eugenii 69 0.0 674
WERAM-Tub-0085 ENSTBEP00000009958.1 Tupaia belangeri 70 0.0 640
WERAM-Ect-0124 ENSETEP00000014412.1 Echinops telfairi 66 1e-170 598
WERAM-Drm-0093 FBpp0074688 Drosophila melanogaster 53 1e-146 518
WERAM-Cae-0002 T14G8.1 Caenorhabditis elegans 52 3e-140 497
WERAM-Tas-0061 ENSTSYP00000005557.1 Tarsius syrichta 69 3e-133 474
WERAM-Cis-0034 ENSCSAVP00000007438.1 Ciona savignyi 51 3e-129 461
WERAM-Ora-0020 ENSOANP00000002890.2 Ornithorhynchus anatinus 85 5e-105 380
WERAM-Soa-0101 ENSSARP00000009501.1 Sorex araneus 69 6e-104 376
WERAM-Chh-0003 ENSCHOP00000000249.1 Choloepus hoffmanni 72 2e-96 351
WERAM-Vip-0109 ENSVPAP00000010051.1 Vicugna pacos 83 9e-92 336
WERAM-Prp-0013 EMJ26664 Prunus persica 58 7e-79 293
WERAM-Sei-0019 Si005700m Setaria italica 56 1e-78 292
WERAM-Glm-0032 GLYMA04G06630.2 Glycine max 56 2e-78 292
WERAM-Sem-0030 EFJ15143 Selaginella moellendorffii 38 3e-78 291
WERAM-Brr-0040 Bra007814.1-P Brassica rapa 56 6e-78 290
WERAM-Bro-0158 Bo8g099350.1 Brassica oleracea 56 9e-78 290
WERAM-Art-0045 AT2G25170.1 Arabidopsis thaliana 56 1e-77 289
WERAM-Viv-0017 VIT_04s0008g05880.t01 Vitis vinifera 56 1e-77 289
WERAM-Tra-0315 Traes_7BS_4FE42A949.1 Triticum aestivum 57 2e-77 288
WERAM-Sol-0080 Solyc06g065730.2.1 Solanum lycopersicum 57 2e-77 288
WERAM-Mua-0130 GSMUA_Achr8P29610_001 Musa acuminata 56 4e-77 287
WERAM-Tru-0086 TRIUR3_31334-P1 Triticum urartu 56 4e-77 287
WERAM-Orm-0057 OMERI06G06420.1 Oryza meridionalis 57 6e-77 287
WERAM-Arl-0065 fgenesh2_kg.3__ 3007__ AT2G13370.1 Arabidopsis lyrata 55 6e-77 287
WERAM-Orr-0060 ORUFI06G05540.1 Oryza rufipogon 57 6e-77 286
WERAM-Orgl-0059 OGLUM06G05590.1 Oryza glumaepatula 57 6e-77 286
WERAM-Ori-0068 BGIOSGA021779-PA Oryza indica 57 6e-77 286
WERAM-Orb-0059 OBART06G05400.1 Oryza barthii 57 8e-77 286
WERAM-Orni-0056 ONIVA06G06230.1 Oryza nivara 57 8e-77 286
WERAM-Aet-0096 EMT22305 Aegilops tauschii 56 1e-76 286
WERAM-Met-0012 KEH39872 Medicago truncatula 55 1e-76 286
WERAM-Orbr-0069 OB06G14970.1 Oryza brachyantha 57 1e-76 286
WERAM-Pot-0009 POPTR_0001s26030.1 Populus trichocarpa 55 2e-76 285
WERAM-Amt-0063 ERN05058 Amborella trichopoda 55 3e-76 285
WERAM-Thc-0112 EOY32819 Theobroma cacao 55 4e-76 284
WERAM-Php-0082 PP1S33_329V6.1 Physcomitrella patens 56 4e-76 284
WERAM-Org-0057 ORGLA06G0049200.1 Oryza glaberrima 56 2e-75 282
WERAM-Brd-0024 BRADI1G47367.1 Brachypodium distachyon 55 8e-75 280
Created Date 25-Jun-2016