WERAM Information

Tag Content
WERAM ID WERAM-Brr-0040
Ensembl Protein ID Bra007814.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra007814 Bra007814.1 Bra007814.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader DCD 7.90e-23 67.3 103 151
Organism Brassica rapa
Domain Profile
  Me_Reader DCD
   Chromo-1.txt   6 vldgrv................ekgeveylvKWkGmsyihntWeseeqL 38 
                    +ld+ +                     +ylvKWkG+sy+h++W++e++ 
  Bra007814.1-P 103 ILDCEMrptisdeqdssdaapkPVSVKQYLVKWKGLSYLHCSWVPEKEF 151
                    5555555555555555555553223459******************975 PP
   Chromo-1.txt   1 evvekvldgrvekgeveylvKWkGmsyihntWeseeqLelqcrvllrnYqkkn 53 
                    ++v+++l  r e+ge +ylvK k +sy ++ Wese +++   ++ ++ ++  n
  Bra007814.1-P 191 TTVDRILAYREEDGEEQYLVKYKELSYDECYWESESDIST-FQNEIQRFKDIN 242
                    6899**********************************96.676666666555 PP
Protein Sequence
(Fasta)		MSSLVERLRL RSDRKPVYNL DESDDEDYAP KKDRTFEQVE AIVRTDAKEN ACQACGESAN 60
LVSCNTCTYA YHAKCLIPPL KDASVENWRC PECVSPLSEM DKILDCEMRP TISDEQDSSD 120
AAPKPVSVKQ YLVKWKGLSY LHCSWVPEKE FVKAYKTNHR LKTRVNNFHR QKLESSNNNE 180
DDFVAIRPEW TTVDRILAYR EEDGEEQYLV KYKELSYDEC YWESESDIST FQNEIQRFKD 240
INSRTRRGNK DVDHRRNPKD FQQFDHSPEF LKGLLHPYQL EGLNFLRFSW SKQTHVILAD 300
EMGLGKTIQS IALLASLFEE NLIPHLVIAP LSTLRNWERE FATWAPQMNV VMYFGTSQAR 360
AVIREHEFYF PKGQQKMKKK KSGQSSSENK QKRIKFDVLL TSYEMINLDT AVLKPIKWEC 420
MIVDEGHRLK NKDSKLFSSL TQYSSNHRIL LTGTPLQNNL DELFMLMHFL DAGKFGSLEE 480
FQEEFKDINQ EEQISRLHRM LAPHLLRRVK KDVMKDMPPK KELILRVDLS SEQKEYYKAI 540
LSRNYQVLTK KGGAQISLNN IMMELRKVCC HPYMLEGVEP VIHDANEAFK KLVESCGKLQ 600
LLDKMMVKLK EQGHRVLIYT QFQHMLDLLE DYCSYKEWSY ERIDGKVGGA ERQIRIDRFN 660
AVNSSRFCFL LSTRAGGLGI NLATADTVII YDSDWNPHAD LQAMARAHRL GQRNKVMIYR 720
LINRGTIEER MMQLTKKKMV LEHLVVGKLK TQNINQEELD DIIRYGSKEL FASEDDEAGK 780
SGKIHYDDAA IDKLLDRDIV DAEEVAVDDE EENGFLKAFK VANFEYIDEN EAAALEAQRV 840
AAEKKSSAGE RATYWEELLK DKFEVQQAEE LNALGKRKRS RKQLVSVEED DLAGLEDVSS 900
DGDESYEADS TDGETPGQGN QTGRRPYRRK GRDNSEPTPL MEGEGRSFRV LGFNQSQRAI 960
FVQTLMRFGV GNYDWKEFVP RLKQKTYDEI KEYGVLFLKH IAEDIDENSS TFSDGVPKEG 1020
LRIEDVLVRI AVLMLVQEKV KLVEDHPGKP VFPNRILERF PGLRSGKVWK EEHDKIMIRA 1080
VLKHGYGRWQ AIVDDKGLGI QELICKELNF PHISLSAAEQ AGLQGQNGSG SSNLGAQNHG 1140
GGVTGNSNAS PADAGQVNSM FYYRDMQRRL VEFVKKRVLL LEKALNYEYA EDYYGLGGSS 1200
SVPSEEPEAE PKVTDTVGAS FIEVDDEMLQ ALPKTEPITS EEIMVAAADN NQERVEIAQL 1260
YNKMCKDLDE NARESVQAYV NNQPSNGKLG ESFRSIESNI SRILSAPSDQ LKSTEDTKPN 1320
LNNVEMDSVE ETKPLRASVD LNVLEGEENI GEGSGSVDVK MEEAK 1365
Nucleotide Sequence
(Fasta)		ATGAGTAGCT TAGTGGAGAG GCTTCGTTTA AGATCAGACA GGAAACCAGT TTACAACCTA 60
GACGAGTCTG ATGATGAGGA CTATGCTCCC AAAAAAGACA GGACCTTTGA GCAAGTTGAG 120
GCTATTGTCA GAACCGACGC GAAAGAAAAC GCATGTCAAG CTTGTGGCGA AAGTGCAAAT 180
CTTGTGAGCT GCAACACCTG CACTTATGCT TACCATGCTA AATGTCTCAT TCCGCCTCTT 240
AAGGATGCTT CTGTTGAGAA TTGGAGATGC CCTGAATGCG TTAGTCCTCT TAGTGAGATG 300
GATAAGATAT TGGACTGTGA GATGCGTCCT ACCATATCCG ATGAACAAGA CTCCTCCGAT 360
GCGGCACCAA AGCCAGTTTC TGTGAAACAG TATCTCGTCA AGTGGAAGGG ATTATCATAC 420
CTTCACTGCT CTTGGGTGCC TGAGAAGGAA TTTGTCAAGG CTTATAAGAC CAACCACCGT 480
CTAAAAACCA GGGTGAACAA CTTTCACCGT CAGAAGCTGG AATCATCCAA CAACAACGAA 540
GATGATTTCG TCGCCATTCG TCCTGAGTGG ACCACCGTTG ATCGGATCCT CGCCTACAGA 600
GAAGAAGATG GCGAGGAACA ATATCTCGTA AAGTATAAAG AGCTTTCTTA TGATGAGTGT 660
TATTGGGAAT CAGAATCAGA TATCTCGACG TTCCAGAATG AGATCCAAAG GTTTAAGGAT 720
ATCAATTCCA GGACTCGCAG AGGTAACAAA GATGTCGACC ATAGAAGAAA TCCTAAAGAC 780
TTTCAGCAGT TTGATCATAG TCCTGAGTTC CTCAAAGGTT TGTTGCATCC GTATCAGCTT 840
GAGGGGCTTA ATTTTCTGCG CTTCTCGTGG TCAAAGCAGA CACATGTTAT CCTTGCTGAT 900
GAAATGGGGC TAGGCAAAAC AATTCAAAGC ATTGCCCTTT TAGCTTCACT TTTTGAGGAG 960
AATCTCATTC CACATTTGGT GATCGCTCCT CTCTCGACTC TGAGGAACTG GGAGAGAGAG 1020
TTCGCCACAT GGGCCCCGCA GATGAATGTG GTTATGTATT TTGGCACTTC GCAAGCTCGA 1080
GCCGTTATTA GAGAACACGA GTTTTACTTT CCCAAAGGCC AGCAAAAGAT GAAGAAGAAG 1140
AAATCTGGAC AAAGCAGTAG TGAAAACAAG CAAAAAAGAA TAAAGTTTGA TGTTCTCCTC 1200
ACATCGTATG AGATGATCAA CCTAGACACA GCAGTTCTTA AACCAATTAA GTGGGAATGC 1260
ATGATTGTTG ATGAAGGCCA TCGACTGAAG AATAAGGATT CAAAGCTGTT CTCTTCATTG 1320
ACACAGTATT CGAGTAACCA TCGTATCCTT CTGACAGGAA CACCACTTCA GAACAACTTG 1380
GATGAACTTT TCATGCTCAT GCATTTTCTT GACGCCGGGA AGTTTGGCAG TTTAGAGGAG 1440
TTCCAGGAGG AGTTCAAAGA TATTAATCAA GAGGAGCAGA TTTCAAGACT CCACAGAATG 1500
TTGGCTCCAC ATTTGCTTAG AAGGGTCAAG AAAGACGTAA TGAAAGACAT GCCCCCTAAG 1560
AAGGAGCTCA TTTTGCGTGT TGATCTAAGC AGCGAGCAAA AAGAATATTA TAAGGCTATT 1620
TTGTCTCGTA ACTATCAAGT ATTGACCAAA AAAGGGGGCG CTCAAATTTC TCTTAATAAC 1680
ATAATGATGG AATTGCGAAA AGTTTGCTGC CATCCTTATA TGCTGGAAGG TGTTGAACCA 1740
GTAATCCACG ATGCAAATGA AGCTTTCAAG AAACTTGTGG AATCTTGTGG AAAGCTGCAA 1800
CTGTTAGACA AAATGATGGT CAAGCTGAAA GAGCAAGGAC ACAGAGTTCT CATATACACA 1860
CAGTTCCAGC ACATGCTTGA CTTGCTTGAA GACTATTGTT CCTATAAGGA ATGGAGCTAT 1920
GAGCGAATCG ATGGAAAGGT TGGAGGAGCT GAGCGGCAAA TACGCATAGA TCGGTTTAAT 1980
GCCGTAAACT CTAGCAGATT CTGTTTTTTG CTCTCTACAA GAGCTGGTGG CTTAGGAATT 2040
AATCTTGCAA CTGCCGATAC AGTAATCATA TATGACAGTG ACTGGAACCC TCATGCTGAT 2100
CTACAGGCTA TGGCTAGAGC ACATCGACTT GGCCAAAGAA ATAAGGTGAT GATTTACAGA 2160
CTCATAAACC GAGGCACCAT TGAAGAAAGG ATGATGCAGT TGACCAAAAA GAAGATGGTT 2220
CTAGAGCATC TTGTTGTTGG GAAACTGAAA ACACAGAACA TCAATCAGGA AGAGTTAGAT 2280
GACATCATCA GGTATGGTTC AAAGGAGCTT TTTGCTAGTG AAGATGACGA AGCAGGGAAG 2340
TCCGGAAAAA TTCATTACGA TGATGCGGCT ATAGACAAGT TGCTTGATCG TGATATCGTA 2400
GATGCAGAGG AGGTCGCAGT GGATGATGAA GAGGAGAATG GATTCTTAAA GGCTTTTAAG 2460
GTGGCGAATT TTGAGTATAT AGATGAAAAT GAGGCGGCAG CATTGGAGGC ACAGAGAGTA 2520
GCTGCGGAAA AAAAATCTTC AGCAGGCGAA AGGGCAACTT ATTGGGAAGA GTTGTTGAAA 2580
GACAAATTTG AGGTGCAGCA GGCTGAGGAG CTTAATGCTC TTGGAAAGAG GAAAAGAAGT 2640
CGCAAACAGT TGGTATCTGT GGAAGAAGAT GATCTTGCTG GTTTGGAAGA TGTGAGCTCT 2700
GATGGAGATG AAAGTTACGA AGCCGATTCA ACAGATGGTG AAACACCTGG ACAAGGAAAT 2760
CAGACGGGTA GAAGGCCATA CCGAAGAAAG GGCAGAGATA ACTCGGAGCC AACTCCTTTG 2820
ATGGAAGGCG AAGGGAGATC TTTTAGAGTA CTCGGTTTCA ACCAGAGTCA AAGGGCGATT 2880
TTTGTTCAGA CGTTGATGAG GTTTGGAGTT GGAAATTACG ACTGGAAGGA GTTTGTTCCT 2940
CGCTTGAAGC AGAAGACCTA TGACGAAATA AAAGAATACG GAGTACTCTT CTTGAAGCAC 3000
ATTGCTGAAG ATATTGACGA AAACTCTTCA ACCTTTTCAG ATGGTGTGCC CAAGGAAGGA 3060
CTTAGAATTG AAGATGTTCT AGTCAGAATT GCTGTTCTTA TGCTTGTACA GGAGAAGGTG 3120
AAACTTGTAG AAGATCATCC AGGGAAACCT GTTTTCCCAA ACCGCATTCT TGAAAGGTTC 3180
CCTGGACTTA GAAGTGGAAA AGTGTGGAAG GAGGAACATG ACAAAATAAT GATACGTGCT 3240
GTTTTAAAGC ATGGGTACGG ACGCTGGCAA GCTATTGTTG ATGACAAAGG GTTGGGGATC 3300
CAAGAGCTTA TCTGCAAAGA ACTGAACTTC CCTCACATAA GTTTGTCTGC TGCTGAGCAA 3360
GCTGGCTTGC AAGGGCAAAA CGGTAGTGGA AGCTCCAATC TGGGAGCACA GAATCATGGA 3420
GGTGGCGTTA CGGGGAATAG TAATGCTTCT CCTGCTGATG CGGGCCAAGT AAACTCCATG 3480
TTCTACTATC GAGACATGCA GAGAAGACTT GTCGAGTTTG TGAAAAAGCG AGTTCTGCTT 3540
CTGGAGAAGG CGTTGAACTA TGAATATGCA GAGGACTATT ATGGACTTGG CGGCTCATCG 3600
TCTGTGCCTA GTGAAGAACC AGAAGCTGAA CCAAAGGTCA CTGACACAGT GGGGGCCAGC 3660
TTTATTGAGG TCGATGATGA AATGCTTCAG GCACTTCCCA AGACTGAGCC CATCACTTCA 3720
GAAGAGATTA TGGTTGCTGC TGCTGACAAC AACCAAGAGC GGGTTGAGAT AGCCCAACTT 3780
TATAACAAGA TGTGCAAAGA TTTAGATGAG AACGCTCGTG AATCTGTCCA AGCATATGTG 3840
AACAACCAAC CGTCTAATGG CAAACTGGGC GAGAGCTTCC GTTCCATAGA ATCTAACATT 3900
AGCAGAATCC TTTCGGCTCC ATCTGATCAA CTCAAGTCTA CTGAAGACAC CAAGCCGAAC 3960
CTAAACAATG TTGAGATGGA CTCGGTCGAA GAAACGAAAC CCTTGAGAGC AAGCGTCGAT 4020
CTGAATGTGT TGGAGGGAGA GGAGAACATT GGAGAAGGTA GTGGAAGTGT TGATGTGAAG 4080
ATGGAAGAAG CCAAATGA 4099
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0158 Bo8g099350.1 Brassica oleracea 97 0.0 2504
WERAM-Art-0045 AT2G25170.1 Arabidopsis thaliana 90 0.0 2308
WERAM-Arl-0023 fgenesh1_pg.C_scaffold_4000458 Arabidopsis lyrata 89 0.0 2303
WERAM-Viv-0017 VIT_04s0008g05880.t01 Vitis vinifera 70 0.0 1798
WERAM-Met-0079 AES73562 Medicago truncatula 69 0.0 1769
WERAM-Glm-0032 GLYMA04G06630.2 Glycine max 69 0.0 1766
WERAM-Prp-0013 EMJ26664 Prunus persica 70 0.0 1757
WERAM-Sol-0080 Solyc06g065730.2.1 Solanum lycopersicum 64 0.0 1622
WERAM-Amt-0083 ERN02848 Amborella trichopoda 60 0.0 1571
WERAM-Mua-0075 GSMUA_Achr4P21270_001 Musa acuminata 60 0.0 1493
WERAM-Sei-0019 Si005700m Setaria italica 58 0.0 1397
WERAM-Orni-0056 ONIVA06G06230.1 Oryza nivara 56 0.0 1380
WERAM-Orb-0059 OBART06G05400.1 Oryza barthii 57 0.0 1379
WERAM-Org-0057 ORGLA06G0049200.1 Oryza glaberrima 56 0.0 1379
WERAM-Orbr-0069 OB06G14970.1 Oryza brachyantha 57 0.0 1344
WERAM-Brd-0024 BRADI1G47367.1 Brachypodium distachyon 60 0.0 1335
WERAM-Orr-0060 ORUFI06G05540.1 Oryza rufipogon 55 0.0 1318
WERAM-Orgl-0059 OGLUM06G05590.1 Oryza glumaepatula 55 0.0 1318
WERAM-Ori-0068 BGIOSGA021779-PA Oryza indica 54 0.0 1293
WERAM-Php-0056 PP1S235_76V6.1 Physcomitrella patens 57 0.0 1283
WERAM-Aet-0096 EMT22305 Aegilops tauschii 58 0.0 1269
WERAM-Tru-0086 TRIUR3_31334-P1 Triticum urartu 54 0.0 1257
WERAM-Sem-0049 EFJ08442 Selaginella moellendorffii 53 0.0 1251
WERAM-Orm-0057 OMERI06G06420.1 Oryza meridionalis 52 0.0 1198
WERAM-Orl-0055 KN539084.1_FGP003 Oryza longistaminata 50 0.0 1069
WERAM-Tra-0315 Traes_7BS_4FE42A949.1 Triticum aestivum 67 0.0 998
WERAM-Hov-0079 MLOC_61346.1 Hordeum vulgare 66 0.0 989
WERAM-Dar-0239 ENSDARP00000133704.1 Danio rerio 42 0.0 766
WERAM-Orn-0079 ENSONIP00000008816.1 Oreochromis niloticus 43 0.0 760
WERAM-Pes-0048 ENSPSIP00000007224.1 Pelodiscus sinensis 41 0.0 760
WERAM-Otg-0071 ENSOGAP00000005103.2 Otolemur garnettii 41 0.0 760
WERAM-Hos-0090 ENSP00000262450.3 Homo sapiens 41 0.0 759
WERAM-Eqc-0062 ENSECAP00000008810.1 Equus caballus 43 0.0 759
WERAM-Paa-0041 ENSPANP00000005715.1 Papio anubis 41 0.0 758
WERAM-Cap-0190 ENSCPOP00000016647.1 Cavia porcellus 43 0.0 758
WERAM-Mup-0094 ENSMPUP00000008791.1 Mustela putorius furo 43 0.0 758
WERAM-Gog-0009 ENSGGOP00000000697.2 Gorilla gorilla 41 0.0 758
WERAM-Loa-0007 ENSLAFP00000000480.3 Loxodonta africana 43 0.0 758
WERAM-Chs-0008 ENSCSAP00000017274.1 Chlorocebus sabaeus 41 0.0 758
WERAM-Caf-0178 ENSCAFP00000024834.4 Canis familiaris 43 0.0 757
WERAM-Dio-0100 ENSDORP00000010071.1 Dipodomys ordii 42 0.0 757
WERAM-Bot-0212 ENSBTAP00000010688.3 Bos taurus 42 0.0 757
WERAM-Fec-0106 ENSFCAP00000008931.3 Felis catus 43 0.0 757
WERAM-Poa-0016 ENSPPYP00000002263.2 Pongo abelii 41 0.0 757
WERAM-Nol-0109 ENSNLEP00000012582.2 Nomascus leucogenys 41 0.0 757
WERAM-Anc-0038 ENSACAP00000004315.3 Anolis carolinensis 42 0.0 757
WERAM-Mod-0059 ENSMODP00000030757.4 Monodelphis domestica 43 0.0 756
WERAM-Ova-0188 ENSOARP00000019164.1 Ovis aries 43 0.0 756
WERAM-Ran-0063 ENSRNOP00000053890.4 Rattus norvegicus 43 0.0 756
WERAM-Ict-0185 ENSSTOP00000015560.1 Ictidomys tridecemlineatus 43 0.0 756
WERAM-Sus-0145 ENSSSCP00000019030.2 Sus scrofa 43 0.0 756
WERAM-Pat-0070 ENSPTRP00000014854.3 Pan troglodytes 43 0.0 755
WERAM-Orla-0061 ENSORLP00000007931.1 Oryzias latipes 43 0.0 755
WERAM-Mum-0025 ENSMUSP00000090649.6 Mus musculus 43 0.0 754
WERAM-Sah-0162 ENSSHAP00000016947.1 Sarcophilus harrisii 43 0.0 754
WERAM-Caj-0148 ENSCJAP00000027281.2 Callithrix jacchus 43 0.0 753
WERAM-Pof-0104 ENSPFOP00000009594.2 Poecilia formosa 43 0.0 753
WERAM-Orc-0212 ENSOCUP00000018080.1 Oryctolagus cuniculus 42 0.0 752
WERAM-Myl-0162 ENSMLUP00000013342.2 Myotis lucifugus 43 0.0 751
WERAM-Leo-0039 ENSLOCP00000005985.1 Lepisosteus oculatus 43 0.0 750
WERAM-Asm-0214 ENSAMXP00000020556.1 Astyanax mexicanus 43 0.0 749
WERAM-Meg-0008 ENSMGAP00000000587.2 Meleagris gallopavo 41 0.0 749
WERAM-Tar-0001 ENSTRUP00000000282.1 Takifugu rubripes 42 0.0 749
WERAM-Aim-0162 ENSAMEP00000015022.1 Ailuropoda melanoleuca 43 0.0 747
WERAM-Xim-0007 ENSXMAP00000001083.1 Xiphophorus maculatus 42 0.0 747
WERAM-Anp-0142 ENSAPLP00000015426.1 Anas platyrhynchos 42 0.0 746
WERAM-Gaga-0006 ENSGALP00000023295.4 Gallus gallus 41 0.0 746
WERAM-Gaa-0207 ENSGACP00000025482.1 Gasterosteus aculeatus 42 0.0 746
WERAM-Dan-0007 ENSDNOP00000000870.3 Dasypus novemcinctus 43 0.0 745
WERAM-Mam-0174 ENSMMUP00000024592.2 Macaca mulatta 43 0.0 745
WERAM-Fia-0118 ENSFALP00000010192.1 Ficedula albicollis 40 0.0 740
WERAM-Tut-0124 ENSTTRP00000009941.1 Tursiops truncatus 41 0.0 740
WERAM-Ten-0159 ENSTNIP00000015977.1 Tetraodon nigroviridis 41 0.0 739
WERAM-Tag-0164 ENSTGUP00000013727.1 Taeniopygia guttata 43 0.0 738
WERAM-Drm-0093 FBpp0074688 Drosophila melanogaster 40 0.0 732
WERAM-Ptv-0138 ENSPVAP00000011854.1 Pteropus vampyrus 42 0.0 731
WERAM-Xet-0022 ENSXETP00000006377.3 Xenopus tropicalis 43 0.0 729
WERAM-Ocp-0105 ENSOPRP00000010147.1 Ochotona princeps 42 0.0 727
WERAM-Lac-0068 ENSLACP00000009098.1 Latimeria chalumnae 40 0.0 724
WERAM-Cae-0011 F26F12.7 Caenorhabditis elegans 40 0.0 724
WERAM-Cis-0034 ENSCSAVP00000007438.1 Ciona savignyi 41 0.0 719
WERAM-Mae-0139 ENSMEUP00000013963.1 Macropus eugenii 42 0.0 700
WERAM-Gam-0169 ENSGMOP00000016904.1 Gadus morhua 46 0.0 695
WERAM-Prc-0043 ENSPCAP00000004225.1 Procavia capensis 45 0.0 671
WERAM-Tub-0084 ENSTBEP00000009893.1 Tupaia belangeri 42 0.0 663
WERAM-Ere-0132 ENSEEUP00000013928.1 Erinaceus europaeus 38 0.0 644
WERAM-Ect-0124 ENSETEP00000014412.1 Echinops telfairi 39 0.0 632
WERAM-Chh-0003 ENSCHOP00000000249.1 Choloepus hoffmanni 43 1e-169 595
WERAM-Ora-0020 ENSOANP00000002890.2 Ornithorhynchus anatinus 44 3e-160 563
WERAM-Pot-0009 POPTR_0001s26030.1 Populus trichocarpa 36 4e-154 543
WERAM-Thc-0019 EOX96881 Theobroma cacao 41 4e-154 543
WERAM-Zem-0110 GRMZM2G316191_P01 Zea mays 40 7e-153 539
WERAM-Sob-0039 Sb02g041910.1 Sorghum bicolor 36 2e-149 528
Created Date 25-Jun-2016