Tag |
Content |
WERAM ID |
WERAM-Eqc-0161 |
Ensembl Protein ID |
ENSECAP00000017401.1 |
Gene Name |
KDM1A |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDM |
LSD1_KDM1 |
7.40e-212 |
705.3 |
127 |
755 |
|
Organism |
Equus caballus |
Domain Profile |
HDM LSD1_KDM1
LSD1.txt 163 laesenkleeklqllvaelksfvylssrdkkiLsws.lavael.envyPlstldl 215 + + + ++e +lq l+a +s+ l r + +L+ + l + + + + Pl t ++ ENSECAP00000017401.1 127 NPKIQLTFEATLQQLEAPYNSDTVLVHRVHSYLERHgLINFGIyKRIKPLPTKKT 181 5667889999***************999999999874444433467777766655 PP LSD1.txt 1 lppkvvilEAkeRvGGri..yskavpvsdleasevsslasnsnavssksvnlelkkvkdkstldsdpLyelssqqlslekvemveref. 86 ++++v++lEA++RvGGr+ ++k+++v+dl+a++v++l++n++av+sk+vn+el+k+k+k+ pLye+++q++++ek+emve+ef ENSECAP00000017401.1 203 FGMDVTLLEARDRVGGRVatFRKGNYVADLGAMVVTGLGGNPMAVVSKQVNMELAKIKQKC-----PLYEANGQAVPKEKDEMVEQEFn 286 79***********************************************************.....*********************** PP LSD1.txt 87 ........vlheldtkvld............vvevqklfvlfeklleyvkvvkskeelkelinkeeslkikileqiqly.......... 145 ++h+ld++vl+ v+++q+++v++e++++++k+vk++eelkel+nk+++lk+ki+e++q+y ENSECAP00000017401.1 287 rlleatsyLSHQLDFNVLNnkpvslgqalevVIQLQEKHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKIKELHQQYkeasevkppr 375 ***************************************************************************************** PP LSD1.txt 146 .isiEalpkslkkdLsel......laesenkleeklqllvaelksfvylssrdkkiLswslavaelenvyPlstldl.......dlell 220 i++E+l+ks+++dL++l lae+++kleeklq+l+a+++s+vylssrd++iL+w++a++e++n++Plstl+l d+e++ ENSECAP00000017401.1 376 dITAEFLVKSKHRDLTALckeydeLAETQGKLEEKLQELEANPPSDVYLSSRDRQILDWHFANLEFANATPLSTLSLkhwdqddDFEFT 464 ***************************************************************************************** PP LSD1.txt 221 gekvavrrGlsdlpvaLastPspLdiklekavrkvkleddkvelsavness......ykvDkvvialpldklksq..lieFePpLpefk 301 g++++vr+G+s++pvaLa ++Ldikl++avr+v+++++++e++avn++s yk+D+v+++lpl++lk+q +++F+PpLpe+k ENSECAP00000017401.1 465 GSHLTVRNGYSCVPVALA---EGLDIKLNTAVRQVRYTASGCEVIAVNTRStsqtfiYKCDAVLCTLPLGVLKQQppAVQFVPPLPEWK 550 ******************...******************************************************************** PP LSD1.txt 302 tkaikridFknlkKviLifkaaFWepnislFGsvpkstarelifdevlrfwnllkePiLlalvkveaidimenisddviqglvsailkv 390 t+a++r++F+nl+Kv+L+f+++FW+p+++lFG+v+++ta++ +e+++fwnl+k+PiLlalv++ea++imenisddvi+g+++ailk+ ENSECAP00000017401.1 551 TSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASR---GELFLFWNLYKAPILLALVAGEAAGIMENISDDVIVGRCLAILKG 636 *****************************************...********************************************* PP LSD1.txt 391 ikgkseaadpletvvsnWeadslt 414 i+g+s++++p+etvvs+W+ad ++ ENSECAP00000017401.1 637 IFGSSAVPQPKETVVSRWRADPWA 660 ********************8654 PP LSD1.txt 537 lLvaellgpsPepPskPsanPyLlyqktqwhvckaladedkrrltGdstaratknevrakLgktlReldslgkqplvdeiaarReayag 625 L+a++++p+P++P++P+++P+L++ +G++t+r+++++v+++L+++lRe++++++q+l+++++++R+a++g ENSECAP00000017401.1 677 DLMAQPITPGPSIPGAPQPIPRLFF-------------------AGEHTIRNYPATVHGALLSGLREAGRIADQFLGAMYTLPRQATPG 746 59***********************...................********************************************* PP LSD1.txt 626 klaeyqrsi 634 ++a++++s+ ENSECAP00000017401.1 747 VPAQQSPSM 755 ******997 PP
|
Protein Sequence (Fasta) | VEYREMDESL ANLSEDEYYS EEERNAKAEK EKKLPPPPPQ APPEEENESE PEEPSGQAGG 60 LQDDSSGGYG DGQASGVEGA AFQSRLPHDR MTSQEAACFP DIISGPQQTQ KVFLFIRNRT 120 LQLWLDNPKI QLTFEATLQQ LEAPYNSDTV LVHRVHSYLE RHGLINFGIY KRIKPLPTKK 180 TGKVIIIGSG VSGLAAARQL QSFGMDVTLL EARDRVGGRV ATFRKGNYVA DLGAMVVTGL 240 GGNPMAVVSK QVNMELAKIK QKCPLYEANG QAVPKEKDEM VEQEFNRLLE ATSYLSHQLD 300 FNVLNNKPVS LGQALEVVIQ LQEKHVKDEQ IEHWKKIVKT QEELKELLNK MVNLKEKIKE 360 LHQQYKEASE VKPPRDITAE FLVKSKHRDL TALCKEYDEL AETQGKLEEK LQELEANPPS 420 DVYLSSRDRQ ILDWHFANLE FANATPLSTL SLKHWDQDDD FEFTGSHLTV RNGYSCVPVA 480 LAEGLDIKLN TAVRQVRYTA SGCEVIAVNT RSTSQTFIYK CDAVLCTLPL GVLKQQPPAV 540 QFVPPLPEWK TSAVQRMGFG NLNKVVLCFD RVFWDPSVNL FGHVGSTTAS RGELFLFWNL 600 YKAPILLALV AGEAAGIMEN ISDDVIVGRC LAILKGIFGS SAVPQPKETV VSRWRADPWA 660 RGSYSYVAAG SSGNDYDLMA QPITPGPSIP GAPQPIPRLF FAGEHTIRNY PATVHGALLS 720 GLREAGRIAD QFLGAMYTLP RQATPGVPAQ QSPSM 755Protein Fasta Sequence
>ENSECAP00000017401.1|LSD1_KDM1|Equus caballus VEYREMDESLANLSEDEYYSEEERNAKAEKEKKLPPPPPQAPPEEENESEPEEPSGQAGGLQDDSSGGYGDGQASGVEGAAFQSRLPHDRMTSQEAACFPDIISGPQQTQKVFLFIRNRTLQLWLDNPKIQLTFEATLQQLEAPYNSDTVLVHRVHSYLERHGLINFGIYKRIKPLPTKKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRKGNYVADLGAMVVTGLGGNPMAVVSKQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLNNKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKIKELHQQYKEASEVKPPRDITAEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQELEANPPSDVYLSSRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLGAMYTLPRQATPGVPAQQSPSM
|
Nucleotide Sequence (Fasta) | GTAGAGTACA GAGAGATGGA TGAAAGCTTG GCGAACCTCT CAGAAGATGA ATATTATTCC 60 GAAGAAGAGA GAAATGCTAA AGCAGAGAAG GAAAAGAAGC TTCCCCCACC ACCCCCTCAA 120 GCCCCACCTG AGGAAGAAAA TGAAAGTGAG CCTGAAGAAC CATCTGGGCA AGCAGGAGGA 180 CTTCAAGACG ACAGTTCTGG AGGGTATGGA GACGGCCAAG CATCAGGTGT GGAGGGTGCA 240 GCTTTCCAGA GTAGACTTCC TCACGACCGG ATGACATCTC AGGAAGCAGC CTGTTTCCCA 300 GACATCATCA GTGGCCCACA GCAGACCCAG AAGGTTTTTC TGTTCATTAG AAACCGCACA 360 TTGCAGTTGT GGTTGGATAA TCCAAAGATT CAGCTGACAT TTGAGGCTAC TCTCCAGCAA 420 TTAGAAGCAC CTTATAACAG TGATACTGTA CTTGTCCACC GAGTTCACAG TTATTTAGAG 480 CGTCATGGTC TTATCAACTT CGGCATCTAT AAGAGGATAA AACCCCTCCC AACTAAAAAG 540 ACAGGAAAGG TAATTATTAT AGGCTCTGGT GTCTCAGGCT TGGCAGCAGC TCGTCAGTTA 600 CAGAGTTTTG GAATGGATGT CACACTTCTA GAAGCCAGGG ATCGTGTGGG TGGACGAGTT 660 GCTACCTTTC GCAAAGGAAA CTACGTAGCT GATCTTGGAG CCATGGTAGT AACAGGTCTT 720 GGAGGGAATC CCATGGCTGT GGTCAGCAAA CAAGTAAATA TGGAACTGGC CAAGATCAAG 780 CAGAAATGCC CACTTTATGA AGCAAATGGA CAAGCTGTTC CTAAAGAGAA AGATGAAATG 840 GTAGAGCAAG AGTTTAACCG GCTGCTAGAA GCTACATCTT ACCTTAGCCA TCAACTAGAC 900 TTCAATGTCC TCAATAATAA GCCTGTGTCC CTTGGCCAGG CATTAGAAGT CGTCATTCAG 960 TTACAAGAAA AGCACGTCAA AGATGAGCAG ATTGAACATT GGAAGAAGAT AGTGAAAACT 1020 CAGGAGGAAT TGAAAGAACT TCTTAATAAG ATGGTAAATT TGAAAGAGAA AATCAAAGAA 1080 CTCCATCAGC AATACAAAGA AGCGTCTGAA GTCAAGCCAC CCAGAGACAT CACTGCTGAG 1140 TTCTTGGTGA AAAGCAAACA CAGAGATCTG ACCGCTCTCT GCAAGGAATA TGATGAATTA 1200 GCTGAAACAC AAGGAAAGCT AGAAGAAAAA CTTCAAGAAT TGGAAGCCAA TCCCCCAAGT 1260 GATGTATACC TGTCGTCAAG AGACAGACAA ATACTTGATT GGCATTTTGC GAATCTTGAA 1320 TTTGCTAATG CTACACCTCT TTCTACGCTC TCCCTTAAAC ATTGGGATCA GGATGATGAC 1380 TTTGAGTTTA CTGGCAGCCA CCTTACAGTG CGGAATGGCT ACTCCTGTGT GCCTGTGGCT 1440 TTAGCAGAAG GCCTAGACAT TAAACTGAAC ACGGCAGTTC GACAGGTTCG CTACACAGCT 1500 TCAGGATGTG AAGTGATAGC TGTGAATACC CGCTCCACAA GCCAAACCTT TATTTATAAA 1560 TGTGATGCAG TTCTCTGTAC CCTTCCCTTG GGTGTGCTGA AGCAGCAGCC ACCAGCTGTT 1620 CAGTTTGTGC CACCTCTTCC TGAATGGAAA ACATCTGCAG TCCAAAGGAT GGGGTTTGGC 1680 AACCTTAACA AGGTGGTGTT GTGTTTCGAC CGGGTGTTCT GGGATCCAAG TGTCAATTTG 1740 TTTGGGCATG TTGGCAGTAC CACTGCCAGC AGGGGTGAGC TCTTCCTCTT CTGGAACCTC 1800 TATAAAGCTC CAATACTGTT GGCACTAGTG GCAGGAGAAG CCGCCGGCAT CATGGAAAAC 1860 ATAAGTGATG ATGTGATTGT TGGCCGATGC CTGGCCATTC TCAAAGGGAT TTTTGGTAGC 1920 AGTGCAGTGC CCCAGCCCAA GGAAACTGTG GTGTCTCGCT GGCGCGCTGA TCCCTGGGCC 1980 CGGGGCTCCT ATTCCTATGT AGCTGCAGGA TCATCTGGAA ACGACTATGA TTTAATGGCT 2040 CAGCCAATCA CTCCCGGCCC CTCAATCCCA GGTGCCCCGC AGCCAATTCC ACGACTCTTC 2100 TTTGCTGGAG AACATACAAT CCGTAACTAC CCAGCTACAG TCCATGGTGC TCTGTTGAGT 2160 GGGCTGCGAG AAGCAGGAAG GATTGCAGAC CAGTTCTTGG GGGCCATGTA CACCCTGCCT 2220 CGCCAGGCCA CACCAGGCGT CCCTGCACAG CAGTCCCCAA GCATGTGAGA CAGACGCGCT 2280 CTAAGG
2287Nucleotide Fasta Sequence
>ENSECAP00000017401.1|LSD1_KDM1|Equus caballus GTAGAGTACAGAGAGATGGATGAAAGCTTGGCGAACCTCTCAGAAGATGAATATTATTCCGAAGAAGAGAGAAATGCTAAAGCAGAGAAGGAAAAGAAGCTTCCCCCACCACCCCCTCAAGCCCCACCTGAGGAAGAAAATGAAAGTGAGCCTGAAGAACCATCTGGGCAAGCAGGAGGACTTCAAGACGACAGTTCTGGAGGGTATGGAGACGGCCAAGCATCAGGTGTGGAGGGTGCAGCTTTCCAGAGTAGACTTCCTCACGACCGGATGACATCTCAGGAAGCAGCCTGTTTCCCAGACATCATCAGTGGCCCACAGCAGACCCAGAAGGTTTTTCTGTTCATTAGAAACCGCACATTGCAGTTGTGGTTGGATAATCCAAAGATTCAGCTGACATTTGAGGCTACTCTCCAGCAATTAGAAGCACCTTATAACAGTGATACTGTACTTGTCCACCGAGTTCACAGTTATTTAGAGCGTCATGGTCTTATCAACTTCGGCATCTATAAGAGGATAAAACCCCTCCCAACTAAAAAGACAGGAAAGGTAATTATTATAGGCTCTGGTGTCTCAGGCTTGGCAGCAGCTCGTCAGTTACAGAGTTTTGGAATGGATGTCACACTTCTAGAAGCCAGGGATCGTGTGGGTGGACGAGTTGCTACCTTTCGCAAAGGAAACTACGTAGCTGATCTTGGAGCCATGGTAGTAACAGGTCTTGGAGGGAATCCCATGGCTGTGGTCAGCAAACAAGTAAATATGGAACTGGCCAAGATCAAGCAGAAATGCCCACTTTATGAAGCAAATGGACAAGCTGTTCCTAAAGAGAAAGATGAAATGGTAGAGCAAGAGTTTAACCGGCTGCTAGAAGCTACATCTTACCTTAGCCATCAACTAGACTTCAATGTCCTCAATAATAAGCCTGTGTCCCTTGGCCAGGCATTAGAAGTCGTCATTCAGTTACAAGAAAAGCACGTCAAAGATGAGCAGATTGAACATTGGAAGAAGATAGTGAAAACTCAGGAGGAATTGAAAGAACTTCTTAATAAGATGGTAAATTTGAAAGAGAAAATCAAAGAACTCCATCAGCAATACAAAGAAGCGTCTGAAGTCAAGCCACCCAGAGACATCACTGCTGAGTTCTTGGTGAAAAGCAAACACAGAGATCTGACCGCTCTCTGCAAGGAATATGATGAATTAGCTGAAACACAAGGAAAGCTAGAAGAAAAACTTCAAGAATTGGAAGCCAATCCCCCAAGTGATGTATACCTGTCGTCAAGAGACAGACAAATACTTGATTGGCATTTTGCGAATCTTGAATTTGCTAATGCTACACCTCTTTCTACGCTCTCCCTTAAACATTGGGATCAGGATGATGACTTTGAGTTTACTGGCAGCCACCTTACAGTGCGGAATGGCTACTCCTGTGTGCCTGTGGCTTTAGCAGAAGGCCTAGACATTAAACTGAACACGGCAGTTCGACAGGTTCGCTACACAGCTTCAGGATGTGAAGTGATAGCTGTGAATACCCGCTCCACAAGCCAAACCTTTATTTATAAATGTGATGCAGTTCTCTGTACCCTTCCCTTGGGTGTGCTGAAGCAGCAGCCACCAGCTGTTCAGTTTGTGCCACCTCTTCCTGAATGGAAAACATCTGCAGTCCAAAGGATGGGGTTTGGCAACCTTAACAAGGTGGTGTTGTGTTTCGACCGGGTGTTCTGGGATCCAAGTGTCAATTTGTTTGGGCATGTTGGCAGTACCACTGCCAGCAGGGGTGAGCTCTTCCTCTTCTGGAACCTCTATAAAGCTCCAATACTGTTGGCACTAGTGGCAGGAGAAGCCGCCGGCATCATGGAAAACATAAGTGATGATGTGATTGTTGGCCGATGCCTGGCCATTCTCAAAGGGATTTTTGGTAGCAGTGCAGTGCCCCAGCCCAAGGAAACTGTGGTGTCTCGCTGGCGCGCTGATCCCTGGGCCCGGGGCTCCTATTCCTATGTAGCTGCAGGATCATCTGGAAACGACTATGATTTAATGGCTCAGCCAATCACTCCCGGCCCCTCAATCCCAGGTGCCCCGCAGCCAATTCCACGACTCTTCTTTGCTGGAGAACATACAATCCGTAACTACCCAGCTACAGTCCATGGTGCTCTGTTGAGTGGGCTGCGAGAAGCAGGAAGGATTGCAGACCAGTTCTTGGGGGCCATGTACACCCTGCCTCGCCAGGCCACACCAGGCGTCCCTGCACAGCAGTCCCCAAGCATGTGAGACAGACGCGCTCTAAGG
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |