Tag |
Content |
WERAM ID |
WERAM-Cap-0194 |
Ensembl Protein ID |
ENSCPOP00000015554.1 |
Gene Name |
|
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDM |
JHDM3_JMJD2 |
1.50e-90 |
301.5 |
39 |
204 |
Me_Reader |
PHD |
9.90e-09 |
35.3 |
613 |
749 |
|
Organism |
Cavia porcellus |
Domain Profile |
HDM JHDM3_JMJD2
JHDM3.txt 2 edveeWnlnklktildsvekelkieieGvntpylyvgmlkttfaWhvedmdlysinylhfGapktWyavpseaakrlekllrkefsesa 90 ++v+eWn+++lktild veke++i+ieGvntpyly+gm+kt+faWh+edmdlysinylhfG+pk+Wy+vp+e++krle+l++ +f++sa ENSCPOP00000015554.1 39 KHVDEWNIGRLKTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSA 127 6899************************************************************************************* PP JHDM3.txt 91 keceaflrhkttlisPellkkagipfnrivqeagefvitfPygyhaGfnhGfnlaestnfaterwievgkeaakcsc 167 ++ceaflrhk+tlisP +lkk+gipf++++qeagef+itfPygyhaGfnhGfn+aestnfat+rwie+gk+a++csc ENSCPOP00000015554.1 128 QSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAVLCSC 204 ****************************************************************************9 PP
Me_Reader PHD
PHD.txt 11 degekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 ++g++++v C++C+ +H++C+++p ++ ++++w+C +C ENSCPOP00000015554.1 613 EDGTSMLVSCKKCSVRVHASCYGVP--PAMASEDWMCSRCS 651 45556699*****************..5554547******7 PP PHD.txt 4 ClvCgkddegekemvqCdeCddwfHlkCv 32 Cl C g ++q + d+w+H++C ENSCPOP00000015554.1 660 CL-C-SLRGG---ALQRANDDRWVHVSCA 683 44.6.33333...456666689******7 PP PHD.txt 4 ClvC.gkddegekemvqCde..CddwfHlkCvklpl 36 C++C ++++ ++ ++vqC++ C+++fH++C + + ENSCPOP00000015554.1 714 CVFCkKRRKRNAGCCVQCSHgrCPTAFHVSCAQAAG 749 ****5467777889*****************99874 PP
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Protein Sequence (Fasta) | RYCTPRYSEF EELEQKYWKN LTFNPPIYGA DVNGTLYEKH VDEWNIGRLK TILDLVEKES 60 GITIEGVNTP YLYFGMWKTS FAWHTEDMDL YSINYLHFGE PKSWYSVPPE HGKRLERLAK 120 GFFPGSAQSC EAFLRHKMTL ISPLMLKKYG IPFDKVTQEA GEFMITFPYG YHAGFNHGFN 180 CAESTNFATR RWIEYGKQAV LCSCRKDMVK ISMDVFVRKF QPERYKLWKA GKDSAVIDHT 240 LPTPEAAEFL KECELPPRAG SEEECPEEDM EGVEDGEEGD LKRSLAKHRI GTKRHRVCLE 300 IPQEVSQSDL FLKEELSSGQ YEMTECQATL APVRPTHNSV RQVEDGLPFP DYSDSAEVKF 360 EELKNVKPAA LDLSVNPASI TGRLVFSGSK KKSSSSLGSS SRDSVSSDSE TSEPLSCQAE 420 GQTGVLTVHS YARGDGRVTV AQPCTRKKGS APRSISEREL AEVADEYMFS LEENKKSKGR 480 RQPLSKLPRH HPLVLQECIS DDETSEQLTP EEEAEETEAW AKLLSQLWQN RPPNFEAEKE 540 FNESLAQQPP HCAVCMIFQT YHQVEFGGLS QNCGNASELA SQKQRTKPLI PEMCFTSTGC 600 STDINLSTPY LEEDGTSMLV SCKKCSVRVH ASCYGVPPAM ASEDWMCSRC SANALEEDCC 660 LCSLRGGALQ RANDDRWVHV SCAVAILEAR FVNIAERSPV DVSKIPLPRF KLKCVFCKKR 720 RKRNAGCCVQ CSHGRCPTAF HVSCAQAAGV MMQPDDWPFV VFITCFRHRI PSLERAKGAL 780 QSITAGQKVI SKHKNGRFYQ CEVVRLTTET FYEVNFDDGS FSDNLYPEDI VVMSASSF 838Protein Fasta Sequence
>ENSCPOP00000015554.1|PHD|Cavia porcellus RYCTPRYSEFEELEQKYWKNLTFNPPIYGADVNGTLYEKHVDEWNIGRLKTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAVLCSCRKDMVKISMDVFVRKFQPERYKLWKAGKDSAVIDHTLPTPEAAEFLKECELPPRAGSEEECPEEDMEGVEDGEEGDLKRSLAKHRIGTKRHRVCLEIPQEVSQSDLFLKEELSSGQYEMTECQATLAPVRPTHNSVRQVEDGLPFPDYSDSAEVKFEELKNVKPAALDLSVNPASITGRLVFSGSKKKSSSSLGSSSRDSVSSDSETSEPLSCQAEGQTGVLTVHSYARGDGRVTVAQPCTRKKGSAPRSISERELAEVADEYMFSLEENKKSKGRRQPLSKLPRHHPLVLQECISDDETSEQLTPEEEAEETEAWAKLLSQLWQNRPPNFEAEKEFNESLAQQPPHCAVCMIFQTYHQVEFGGLSQNCGNASELASQKQRTKPLIPEMCFTSTGCSTDINLSTPYLEEDGTSMLVSCKKCSVRVHASCYGVPPAMASEDWMCSRCSANALEEDCCLCSLRGGALQRANDDRWVHVSCAVAILEARFVNIAERSPVDVSKIPLPRFKLKCVFCKKRRKRNAGCCVQCSHGRCPTAFHVSCAQAAGVMMQPDDWPFVVFITCFRHRIPSLERAKGALQSITAGQKVISKHKNGRFYQCEVVRLTTETFYEVNFDDGSFSDNLYPEDIVVMSASSF
|
Nucleotide Sequence (Fasta) | AGGTACTGTA CCCCACGCTA CAGTGAGTTT GAAGAGCTTG AGCAGAAATA CTGGAAGAAC 60 CTCACATTCA ATCCTCCCAT CTATGGTGCA GATGTGAATG GTACTCTCTA TGAAAAGCAT 120 GTCGATGAGT GGAATATTGG CCGGCTGAAG ACCATCTTGG ACTTGGTGGA GAAGGAGAGT 180 GGGATCACCA TTGAGGGAGT GAACACCCCA TACTTGTATT TTGGCATGTG GAAGACATCC 240 TTTGCCTGGC ATACGGAAGA CATGGACCTG TACAGCATCA ACTACTTGCA CTTTGGAGAG 300 CCAAAGTCCT GGTACTCTGT TCCACCCGAG CATGGAAAAC GCCTGGAGCG CCTCGCCAAA 360 GGCTTTTTCC CAGGAAGTGC TCAAAGCTGT GAGGCTTTTC TTCGCCATAA GATGACCCTG 420 ATATCCCCTT TAATGCTGAA GAAATACGGC ATTCCTTTTG ACAAGGTGAC TCAAGAAGCT 480 GGCGAGTTTA TGATCACTTT CCCTTATGGT TACCATGCTG GTTTTAACCA TGGCTTTAAC 540 TGTGCGGAAT CTACCAACTT TGCTACACGT CGATGGATTG AATATGGCAA ACAAGCTGTA 600 TTGTGCTCCT GCAGAAAGGA TATGGTGAAG ATCTCCATGG ATGTGTTTGT GAGGAAGTTC 660 CAGCCAGAAA GGTACAAACT TTGGAAAGCT GGCAAGGACA GCGCGGTCAT CGACCACACT 720 CTGCCTACTC CAGAAGCCGC TGAGTTTCTC AAAGAGTGTG AACTACCACC AAGAGCCGGG 780 AGTGAAGAGG AGTGCCCTGA AGAGGACATG GAAGGGGTGG AGGACGGAGA GGAGGGAGAC 840 CTGAAGAGAA GCCTGGCCAA GCATCGTATA GGAACAAAGA GGCACCGGGT TTGTCTGGAA 900 ATACCACAGG AGGTGAGTCA GAGTGACCTG TTCCTCAAGG AGGAGCTGAG CTCTGGCCAG 960 TATGAGATGA CGGAGTGCCA GGCCACACTT GCTCCCGTGA GGCCCACCCA CAACTCTGTG 1020 CGGCAAGTTG AGGATGGTCT ACCCTTCCCA GATTACTCTG ACTCTGCTGA AGTCAAATTC 1080 GAAGAGCTCA AGAACGTCAA ACCAGCTGCC CTCGATCTTT CTGTAAATCC TGCTTCTATA 1140 ACTGGACGCC TGGTCTTCTC GGGTTCCAAA AAGAAATCAT CTTCTAGCCT GGGCTCCAGT 1200 TCTCGGGATT CTGTTTCTTC TGATTCGGAA ACCAGTGAGC CCCTCTCCTG CCAAGCTGAA 1260 GGGCAAACGG GAGTTCTTAC TGTGCACAGC TATGCCAGAG GCGATGGCAG GGTCACCGTG 1320 GCACAGCCGT GCACAAGGAA GAAAGGCAGT GCCCCCAGAA GTATCAGCGA GCGGGAGCTG 1380 GCTGAGGTTG CAGATGAATA CATGTTTTCC CTGGAGGAGA ATAAGAAGTC CAAGGGTCGC 1440 CGTCAGCCCT TAAGCAAGCT CCCGAGGCAT CATCCGCTTG TGTTGCAGGA GTGCATCAGT 1500 GACGATGAGA CCTCTGAGCA ATTGACCCCC GAGGAGGAGG CTGAGGAGAC AGAGGCCTGG 1560 GCCAAGCTCC TGAGCCAACT GTGGCAGAAC CGACCCCCAA ACTTTGAGGC TGAAAAGGAA 1620 TTCAATGAGA GCTTGGCCCA GCAGCCCCCT CACTGTGCTG TCTGTATGAT CTTCCAGACG 1680 TATCATCAGG TCGAATTTGG AGGCCTTAGC CAGAACTGCG GAAATGCTTC GGAATTAGCC 1740 TCCCAAAAGC AGAGGACTAA GCCATTGATT CCAGAAATGT GTTTCACCTC AACTGGCTGC 1800 AGTACAGACA TTAACCTGTC TACTCCTTAT CTTGAGGAAG ATGGTACCAG CATGCTAGTT 1860 TCCTGCAAGA AATGCAGTGT CCGTGTTCAT GCTAGTTGCT ACGGTGTACC CCCTGCAATG 1920 GCTTCTGAAG ACTGGATGTG TTCTCGGTGT TCAGCCAATG CCCTAGAGGA AGACTGTTGT 1980 TTATGCTCCT TACGAGGAGG GGCCCTGCAG AGAGCAAATG ATGATAGGTG GGTCCATGTT 2040 TCATGTGCTG TGGCAATTCT GGAAGCAAGA TTTGTCAACA TTGCAGAGAG AAGTCCAGTG 2100 GATGTGAGCA AAATCCCCTT GCCCCGCTTC AAACTGAAAT GTGTCTTCTG TAAGAAGCGG 2160 AGGAAAAGAA ACGCTGGCTG CTGTGTGCAG TGTTCCCATG GTCGGTGCCC AACTGCCTTC 2220 CACGTGAGCT GTGCCCAGGC TGCTGGAGTG ATGATGCAGC CAGATGACTG GCCTTTTGTT 2280 GTCTTTATTA CCTGCTTTCG GCATAGGATT CCCAGTTTGG AGCGTGCCAA AGGGGCCTTG 2340 CAGAGTATTA CTGCTGGCCA GAAGGTCATT AGCAAACATA AGAATGGGCG CTTCTACCAG 2400 TGTGAAGTGG TCAGGCTCAC CACTGAGACC TTCTATGAAG TCAATTTTGA TGATGGCTCC 2460 TTCAGTGACA ATCTGTATCC TGAGGACATA GTGGTAATGT CTGCAAGCAG CTTC
2515Nucleotide Fasta Sequence
>ENSCPOP00000015554.1|PHD|Cavia porcellus AGGTACTGTACCCCACGCTACAGTGAGTTTGAAGAGCTTGAGCAGAAATACTGGAAGAACCTCACATTCAATCCTCCCATCTATGGTGCAGATGTGAATGGTACTCTCTATGAAAAGCATGTCGATGAGTGGAATATTGGCCGGCTGAAGACCATCTTGGACTTGGTGGAGAAGGAGAGTGGGATCACCATTGAGGGAGTGAACACCCCATACTTGTATTTTGGCATGTGGAAGACATCCTTTGCCTGGCATACGGAAGACATGGACCTGTACAGCATCAACTACTTGCACTTTGGAGAGCCAAAGTCCTGGTACTCTGTTCCACCCGAGCATGGAAAACGCCTGGAGCGCCTCGCCAAAGGCTTTTTCCCAGGAAGTGCTCAAAGCTGTGAGGCTTTTCTTCGCCATAAGATGACCCTGATATCCCCTTTAATGCTGAAGAAATACGGCATTCCTTTTGACAAGGTGACTCAAGAAGCTGGCGAGTTTATGATCACTTTCCCTTATGGTTACCATGCTGGTTTTAACCATGGCTTTAACTGTGCGGAATCTACCAACTTTGCTACACGTCGATGGATTGAATATGGCAAACAAGCTGTATTGTGCTCCTGCAGAAAGGATATGGTGAAGATCTCCATGGATGTGTTTGTGAGGAAGTTCCAGCCAGAAAGGTACAAACTTTGGAAAGCTGGCAAGGACAGCGCGGTCATCGACCACACTCTGCCTACTCCAGAAGCCGCTGAGTTTCTCAAAGAGTGTGAACTACCACCAAGAGCCGGGAGTGAAGAGGAGTGCCCTGAAGAGGACATGGAAGGGGTGGAGGACGGAGAGGAGGGAGACCTGAAGAGAAGCCTGGCCAAGCATCGTATAGGAACAAAGAGGCACCGGGTTTGTCTGGAAATACCACAGGAGGTGAGTCAGAGTGACCTGTTCCTCAAGGAGGAGCTGAGCTCTGGCCAGTATGAGATGACGGAGTGCCAGGCCACACTTGCTCCCGTGAGGCCCACCCACAACTCTGTGCGGCAAGTTGAGGATGGTCTACCCTTCCCAGATTACTCTGACTCTGCTGAAGTCAAATTCGAAGAGCTCAAGAACGTCAAACCAGCTGCCCTCGATCTTTCTGTAAATCCTGCTTCTATAACTGGACGCCTGGTCTTCTCGGGTTCCAAAAAGAAATCATCTTCTAGCCTGGGCTCCAGTTCTCGGGATTCTGTTTCTTCTGATTCGGAAACCAGTGAGCCCCTCTCCTGCCAAGCTGAAGGGCAAACGGGAGTTCTTACTGTGCACAGCTATGCCAGAGGCGATGGCAGGGTCACCGTGGCACAGCCGTGCACAAGGAAGAAAGGCAGTGCCCCCAGAAGTATCAGCGAGCGGGAGCTGGCTGAGGTTGCAGATGAATACATGTTTTCCCTGGAGGAGAATAAGAAGTCCAAGGGTCGCCGTCAGCCCTTAAGCAAGCTCCCGAGGCATCATCCGCTTGTGTTGCAGGAGTGCATCAGTGACGATGAGACCTCTGAGCAATTGACCCCCGAGGAGGAGGCTGAGGAGACAGAGGCCTGGGCCAAGCTCCTGAGCCAACTGTGGCAGAACCGACCCCCAAACTTTGAGGCTGAAAAGGAATTCAATGAGAGCTTGGCCCAGCAGCCCCCTCACTGTGCTGTCTGTATGATCTTCCAGACGTATCATCAGGTCGAATTTGGAGGCCTTAGCCAGAACTGCGGAAATGCTTCGGAATTAGCCTCCCAAAAGCAGAGGACTAAGCCATTGATTCCAGAAATGTGTTTCACCTCAACTGGCTGCAGTACAGACATTAACCTGTCTACTCCTTATCTTGAGGAAGATGGTACCAGCATGCTAGTTTCCTGCAAGAAATGCAGTGTCCGTGTTCATGCTAGTTGCTACGGTGTACCCCCTGCAATGGCTTCTGAAGACTGGATGTGTTCTCGGTGTTCAGCCAATGCCCTAGAGGAAGACTGTTGTTTATGCTCCTTACGAGGAGGGGCCCTGCAGAGAGCAAATGATGATAGGTGGGTCCATGTTTCATGTGCTGTGGCAATTCTGGAAGCAAGATTTGTCAACATTGCAGAGAGAAGTCCAGTGGATGTGAGCAAAATCCCCTTGCCCCGCTTCAAACTGAAATGTGTCTTCTGTAAGAAGCGGAGGAAAAGAAACGCTGGCTGCTGTGTGCAGTGTTCCCATGGTCGGTGCCCAACTGCCTTCCACGTGAGCTGTGCCCAGGCTGCTGGAGTGATGATGCAGCCAGATGACTGGCCTTTTGTTGTCTTTATTACCTGCTTTCGGCATAGGATTCCCAGTTTGGAGCGTGCCAAAGGGGCCTTGCAGAGTATTACTGCTGGCCAGAAGGTCATTAGCAAACATAAGAATGGGCGCTTCTACCAGTGTGAAGTGGTCAGGCTCACCACTGAGACCTTCTATGAAGTCAATTTTGATGATGGCTCCTTCAGTGACAATCTGTATCCTGAGGACATAGTGGTAATGTCTGCAAGCAGCTTC
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |