WERAM Information

Tag Content
WERAM ID WERAM-Brr-0201
Ensembl Protein ID Bra040045.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra040045 Bra040045.1 Bra040045.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 2.00e-15 57.7 131 325
Organism Brassica rapa
Domain Profile
  Me_Reader PHD
        PHD.txt   2 tiClvC.gkddegeke...mvqCdeCddwfHlkCvklplsslpeg....kswyCpsCk 51 
                     +C++C   +++g++    m+ C++C + +H +Cvk      + +    +sw CpsC+
  Bra040045.1-P 131 VMCRMCfLGESHGSERarrMLSCKTCGKKYHKNCVKSW--AQHRDlfhwSSWSCPSCR 186
                    58****7544444333466*****************99..44444456789******8 PP
        PHD.txt   3 iClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                    +C vC+++++ +k +v C+ Cd ++H +C ++p +++++g  ++Cp++++
  Bra040045.1-P 187 VCEVCRRTGDPNK-FVFCKRCDAAYHCYCQHPPHKNVSSG-PYLCPKHTR 234
                    7****87777776.*************************9.******986 PP
        PHD.txt   3 iClvCgkddegeke.......mvqCdeC 23 
                     C  C+ +  g+           +Cd C
  Bra040045.1-P 234 RCHSCDSTVPGNGLsvrwflsYTCCDAC 261
                    4555543333322223333334456666 PP
        PHD.txt   2 tiClvCgkddegeke..mvqCdeCddwfHlkCvklp....lsslpeg.....kswyCpsCk 51 
                    ++C++C k++ +++   mv+Cd C++w+H +C +++    l    +       ++ C +C+
  Bra040045.1-P 269 NYCPLCLKVYRDSEStpMVCCDLCQRWVHCHCDGISdekyL----QFqadgnLQYKCATCR 325
                    79****98888866677*******************54421....223456778******8 PP
Protein Sequence
(Fasta)		MAFHVACPIT CRRICSCSLG FPRDLRGADS KEDFLRGVRR VEDSLIDPWG SSKVVTVQVR 60
APKVRKDSIG DGAVDEAAAE EEASAQRKRV SLQRQAAVTV EAAEDYARRF ESGVNELSSN 120
EEELAQCGVN VMCRMCFLGE SHGSERARRM LSCKTCGKKY HKNCVKSWAQ HRDLFHWSSW 180
SCPSCRVCEV CRRTGDPNKF VFCKRCDAAY HCYCQHPPHK NVSSGPYLCP KHTRCHSCDS 240
TVPGNGLSVR WFLSYTCCDA CGRLFVKGNY CPLCLKVYRD SESTPMVCCD LCQRWVHCHC 300
DGISDEKYLQ FQADGNLQYK CATCRGEGYQ VKDLQDAVQE LWKKKDMVDA ELVASLRAAA 360
GLPTDEEIFS ISPFSDDEEN GPVSGRSVKL SIKGLVDKSP KKSKEYRKHV SKKGHHTKSE 420
LQQDSDVHHG MESQRSRLSG AKTDSFGIQM NERSDVRSSV AGICSTHEPR IVKHKRVDDV 480
MVTDEEKPSR IVRIKCSNKP QDSDSEETSL KAKKLVINLG ARKINVSDSS KSNVVSHSRD 540
RDQSSGEVRT LKISGRFGKT KSEGSKGTFG SITQFPASTS AGSHVDDKTS ISPSLQKEAR 600
PLLKFKLRKP DSGDQTSLAT TQSEDEKLSS GKGQRSKRKR PSSLVDKASL EEDGDSRQDS 660
PRSDEMMDAN WILKKLGKDS IGKRVEVQGS QNSWNKGTVT DVIRDTSTLS VSLDDGSMKT 720
FELGKHNVRF IPQKQKRSRS
Nucleotide Sequence
(Fasta)		ATGGCCTTTC ACGTAGCTTG CCCAATCACT TGCCGTCGGA TCTGCTCCTG CTCCCTAGGG 60
TTCCCTCGCG ATCTCCGCGG CGCCGATTCG AAAGAGGACT TTCTGAGAGG CGTTCGCCGA 120
GTGGAGGATT CTCTGATCGA TCCTTGGGGC TCTTCTAAGG TTGTTACGGT TCAGGTTAGG 180
GCTCCGAAGG TTCGTAAGGA TTCGATTGGA GATGGCGCCG TTGACGAAGC CGCGGCGGAG 240
GAGGAGGCTT CGGCGCAGAG GAAGCGCGTT TCTCTACAGA GGCAAGCCGC TGTTACGGTT 300
GAGGCTGCCG AGGATTACGC TCGGAGGTTC GAATCTGGTG TCAATGAGCT TTCCTCAAAC 360
GAGGAGGAGT TAGCTCAGTG TGGCGTGAAT GTGATGTGTA GAATGTGCTT TTTGGGGGAA 420
AGTCATGGAA GCGAGAGAGC GAGGAGGATG CTTTCTTGTA AAACCTGTGG GAAGAAGTAC 480
CACAAGAATT GTGTAAAGTC TTGGGCTCAA CATAGAGATT TGTTTCATTG GAGTTCATGG 540
AGTTGTCCCT CGTGCCGTGT TTGTGAGGTT TGTCGTAGAA CAGGAGATCC GAACAAGTTT 600
GTGTTCTGCA AAAGGTGTGA TGCTGCTTAC CATTGCTATT GCCAGCATCC TCCACACAAG 660
AATGTAAGTT CTGGGCCGTA TTTGTGCCCG AAGCATACAA GATGCCACAG CTGTGATTCT 720
ACCGTCCCTG GAAACGGCCT TAGTGTCAGG TGGTTTTTAT CATATACTTG CTGTGATGCT 780
TGTGGCAGAT TGTTTGTGAA AGGAAATTAT TGCCCTCTAT GCTTGAAGGT GTATAGGGAT 840
TCAGAATCAA CGCCAATGGT ATGCTGCGAT CTTTGTCAGC GTTGGGTGCA TTGCCATTGC 900
GACGGAATAA GTGATGAGAA ATATCTCCAG TTTCAAGCTG ATGGGAACCT ACAATATAAA 960
TGTGCCACAT GCCGTGGGGA GGGTTATCAG GTGAAGGATC TTCAGGATGC TGTTCAAGAA 1020
CTTTGGAAGA AGAAAGATAT GGTGGACGCA GAGTTAGTTG CTAGTTTAAG GGCTGCTGCT 1080
GGTTTGCCAA CAGATGAAGA AATATTTTCG ATCTCTCCGT TTTCAGATGA TGAAGAAAAC 1140
GGTCCTGTGT CTGGGCGTTC AGTGAAGCTT TCTATCAAAG GACTGGTGGA TAAATCCCCA 1200
AAGAAAAGCA AGGAGTACAG AAAACATGTT AGTAAAAAAG GTCACCATAC TAAGTCAGAG 1260
CTCCAACAGG ATTCTGATGT GCATCACGGG ATGGAATCTC AGAGAAGCAG GCTAAGTGGT 1320
GCTAAAACTG ATAGTTTTGG GATTCAGATG AATGAACGAT CTGATGTTCG TTCTTCTGTG 1380
GCTGGAATTT GCTCAACGCA TGAACCTAGG ATTGTGAAAC ACAAGAGGGT TGATGACGTT 1440
ATGGTGACCG ATGAAGAAAA GCCATCAAGG ATAGTGAGAA TAAAGTGTAG CAACAAGCCT 1500
CAGGATTCTG ATAGCGAAGA GACATCATTG AAGGCAAAGA AGTTGGTCAT TAATCTTGGC 1560
GCGAGGAAAA TAAATGTCAG CGATTCTTCC AAGTCCAATG TTGTTTCTCA TTCGAGGGAC 1620
AGAGATCAGT CTTCTGGTGA GGTACGAACC TTGAAGATAT CTGGAAGATT TGGGAAAACT 1680
AAATCTGAAG GAAGTAAAGG TACTTTTGGG TCGATCACAC AGTTCCCTGC ATCAACAAGC 1740
GCAGGTAGTC ATGTTGATGA CAAAACATCC ATCTCACCAT CTTTACAGAA AGAAGCTAGA 1800
CCTCTGCTGA AATTTAAACT CAGGAAACCT GATTCGGGAG ATCAGACATC TTTGGCTACA 1860
ACGCAATCTG AGGATGAAAA GCTGAGTTCT GGAAAGGGTC AGAGATCGAA GAGAAAGAGA 1920
CCTTCAAGTT TAGTGGACAA GGCTTCTTTG GAGGAAGACG GTGATTCTCG TCAAGATAGT 1980
CCCAGGAGCG ATGAGATGAT GGATGCTAAC TGGATTTTGA AAAAGTTGGG TAAAGATTCA 2040
ATAGGAAAGA GAGTCGAAGT CCAAGGATCT CAGAACTCAT GGAATAAAGG AACAGTAACA 2100
GACGTTATTA GAGACACGTC CACATTGTCG GTTTCTCTAG ATGATGGAAG CATGAAGACA 2160
TTTGAACTTG GGAAGCACAA TGTCCGCTTC ATACCGCAGA AGCAAAAGAG GTCGAGGAGT 2220
TGA 2224
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0020 Bo1g145070.1 Brassica oleracea 97 0.0 1420
WERAM-Arl-0072 fgenesh2_kg.3__ 844__ AT3G08020.1 Arabidopsis lyrata 79 0.0 1214
WERAM-Art-0067 AT3G08020.1 Arabidopsis thaliana 79 0.0 1184
WERAM-Prp-0032 EMJ21805 Prunus persica 53 0.0 764
WERAM-Pot-0105 POPTR_0009s06460.1 Populus trichocarpa 50 0.0 743
WERAM-Glm-0137 GLYMA12G01040.1 Glycine max 49 0.0 710
WERAM-Met-0094 KEH29501 Medicago truncatula 48 0.0 697
WERAM-Thc-0017 EOX96661 Theobroma cacao 63 0.0 682
WERAM-Viv-0082 VIT_13s0064g00630.t01 Vitis vinifera 58 0.0 655
WERAM-Sol-0013 Solyc01g087430.2.1 Solanum lycopersicum 57 3e-178 623
WERAM-Mua-0133 GSMUA_Achr8P31480_001 Musa acuminata 60 2e-162 570
WERAM-Zem-0124 GRMZM2G365888_P01 Zea mays 41 2e-157 553
WERAM-Tra-0246 Traes_5DS_E82950B9C.1 Triticum aestivum 41 5e-153 539
WERAM-Amt-0090 ERN00866 Amborella trichopoda 60 3e-149 526
WERAM-Lep-0118 LPERR12G11680.1 Leersia perrieri 40 4e-149 526
WERAM-Orr-0123 ORUFI12G15660.1 Oryza rufipogon 39 7e-149 525
WERAM-Orbr-0125 OB12G21490.1 Oryza brachyantha 43 3e-143 506
WERAM-Orni-0122 ONIVA12G14190.1 Oryza nivara 41 5e-142 502
WERAM-Orl-0077 KN539619.1_FGP013 Oryza longistaminata 41 6e-142 502
WERAM-Orp-0113 OPUNC12G12830.1 Oryza punctata 42 3e-141 499
WERAM-Sei-0081 Si021380m Setaria italica 42 6e-141 498
WERAM-Org-0115 ORGLA12G0122900.1 Oryza glaberrima 41 8e-141 498
WERAM-Ors-0110 OS12T0527800-01 Oryza sativa 41 3e-140 496
WERAM-Hov-0071 MLOC_58575.1 Hordeum vulgare 55 8e-131 465
WERAM-Orgl-0120 OGLUM12G15650.1 Oryza glumaepatula 58 2e-120 430
WERAM-Brd-0094 BRADI4G06137.1 Brachypodium distachyon 64 2e-118 424
WERAM-Php-0038 PP1S184_45V6.1 Physcomitrella patens 47 3e-113 407
WERAM-Ori-0124 BGIOSGA036080-PA Oryza indica 56 2e-112 404
WERAM-Orb-0123 OBART12G14210.1 Oryza barthii 58 3e-89 327
WERAM-Sem-0114 EFJ10374 Selaginella moellendorffii 53 9e-87 318
WERAM-Orm-0107 OMERI12G10030.1 Oryza meridionalis 38 2e-50 198
WERAM-Dar-0184 ENSDARP00000115827.2 Danio rerio 36 2e-28 125
WERAM-Meg-0048 ENSMGAP00000004625.2 Meleagris gallopavo 34 4e-28 124
WERAM-Gaga-0065 ENSGALP00000010110.4 Gallus gallus 34 5e-28 124
WERAM-Tag-0008 ENSTGUP00000000641.1 Taeniopygia guttata 34 6e-28 123
WERAM-Anp-0025 ENSAPLP00000003226.1 Anas platyrhynchos 34 6e-28 123
WERAM-Ocp-0011 ENSOPRP00000001256.2 Ochotona princeps 34 8e-28 123
WERAM-Tar-0215 ENSTRUP00000044838.1 Takifugu rubripes 36 1e-27 122
WERAM-Ten-0167 ENSTNIP00000016534.1 Tetraodon nigroviridis 35 5e-27 120
WERAM-Gaa-0138 ENSGACP00000017696.1 Gasterosteus aculeatus 35 7e-27 120
WERAM-Orla-0181 ENSORLP00000020984.1 Oryzias latipes 35 8e-27 119
WERAM-Ran-0238 ENSRNOP00000071806.1 Rattus norvegicus 34 8e-27 119
WERAM-Leo-0127 ENSLOCP00000015481.1 Lepisosteus oculatus 35 9e-27 119
WERAM-Lac-0079 ENSLACP00000010253.1 Latimeria chalumnae 34 9e-27 119
WERAM-Mim-0097 ENSMICP00000009069.1 Microcebus murinus 34 9e-27 119
WERAM-Orc-0128 ENSOCUP00000011001.2 Oryctolagus cuniculus 34 1e-26 119
WERAM-Dan-0042 ENSDNOP00000004307.3 Dasypus novemcinctus 34 1e-26 119
WERAM-Bot-0034 ENSBTAP00000003584.5 Bos taurus 34 1e-26 119
WERAM-Ora-0065 ENSOANP00000009850.3 Ornithorhynchus anatinus 34 1e-26 119
WERAM-Caj-0107 ENSCJAP00000018740.2 Callithrix jacchus 32 1e-26 119
WERAM-Gam-0038 ENSGMOP00000003815.1 Gadus morhua 35 1e-26 119
WERAM-Mum-0016 ENSMUSP00000006470.7 Mus musculus 34 2e-26 119
WERAM-Ict-0194 ENSSTOP00000017577.1 Ictidomys tridecemlineatus 34 2e-26 119
WERAM-Ova-0040 ENSOARP00000005352.1 Ovis aries 34 2e-26 119
WERAM-Ere-0115 ENSEEUP00000012211.1 Erinaceus europaeus 34 2e-26 119
WERAM-Paa-0047 ENSPANP00000008627.1 Papio anubis 34 2e-26 118
WERAM-Myl-0129 ENSMLUP00000010443.2 Myotis lucifugus 34 2e-26 118
WERAM-Chs-0048 ENSCSAP00000000728.1 Chlorocebus sabaeus 34 2e-26 118
WERAM-Ptv-0144 ENSPVAP00000012104.1 Pteropus vampyrus 33 2e-26 118
WERAM-Hos-0263 ENSP00000398837.1 Homo sapiens 34 2e-26 118
WERAM-Sus-0021 ENSSSCP00000003118.2 Sus scrofa 34 2e-26 118
WERAM-Gog-0190 ENSGGOP00000016403.2 Gorilla gorilla 34 2e-26 118
WERAM-Otg-0054 ENSOGAP00000003714.2 Otolemur garnettii 34 2e-26 118
WERAM-Pat-0090 ENSPTRP00000018591.5 Pan troglodytes 34 3e-26 118
WERAM-Tut-0028 ENSTTRP00000002118.1 Tursiops truncatus 33 3e-26 117
WERAM-Nol-0118 ENSNLEP00000013752.1 Nomascus leucogenys 34 3e-26 117
WERAM-Mam-0017 ENSMMUP00000003194.2 Macaca mulatta 34 3e-26 117
WERAM-Mup-0069 ENSMPUP00000006153.1 Mustela putorius furo 34 3e-26 117
WERAM-Tub-0051 ENSTBEP00000006325.1 Tupaia belangeri 34 3e-26 117
WERAM-Loa-0084 ENSLAFP00000006640.4 Loxodonta africana 33 4e-26 117
WERAM-Anc-0148 ENSACAP00000014142.2 Anolis carolinensis 35 5e-26 117
WERAM-Fec-0070 ENSFCAP00000005933.3 Felis catus 33 6e-26 117
WERAM-Eqc-0036 ENSECAP00000005758.1 Equus caballus 34 6e-26 117
WERAM-Caf-0080 ENSCAFP00000010253.3 Canis familiaris 33 6e-26 117
WERAM-Dio-0085 ENSDORP00000008518.1 Dipodomys ordii 34 7e-26 116
WERAM-Aim-0005 ENSAMEP00000000356.1 Ailuropoda melanoleuca 33 7e-26 116
WERAM-Xim-0055 ENSXMAP00000005029.1 Xiphophorus maculatus 31 8e-26 116
WERAM-Orn-0120 ENSONIP00000012272.1 Oreochromis niloticus 35 2e-25 115
WERAM-Cap-0018 ENSCPOP00000001682.2 Cavia porcellus 32 3e-25 114
WERAM-Fia-0003 ENSFALP00000000206.1 Ficedula albicollis 32 4e-25 114
WERAM-Sah-0130 ENSSHAP00000013860.1 Sarcophilus harrisii 32 5e-25 114
WERAM-Pof-0064 ENSPFOP00000005925.2 Poecilia formosa 35 5e-25 114
WERAM-Mod-0040 ENSMODP00000005845.3 Monodelphis domestica 32 6e-25 113
WERAM-Prc-0037 ENSPCAP00000003628.1 Procavia capensis 31 8e-25 113
WERAM-Tas-0126 ENSTSYP00000013377.1 Tarsius syrichta 32 1e-24 112
WERAM-Xet-0067 ENSXETP00000022279.3 Xenopus tropicalis 30 1e-24 112
WERAM-Poa-0043 ENSPPYP00000005112.2 Pongo abelii 32 3e-24 111
WERAM-Soa-0040 ENSSARP00000003919.1 Sorex araneus 32 3e-24 111
WERAM-Mae-0064 ENSMEUP00000005938.1 Macropus eugenii 32 3e-24 111
WERAM-Pes-0058 ENSPSIP00000007945.1 Pelodiscus sinensis 34 5e-24 110
WERAM-Ect-0072 ENSETEP00000007880.1 Echinops telfairi 34 9e-24 109
WERAM-Vip-0054 ENSVPAP00000005197.1 Vicugna pacos 34 5e-23 107
WERAM-Pem-0018 ENSPMAP00000002590.1 Petromyzon marinus 33 5e-23 107
WERAM-Asm-0037 ENSAMXP00000004791.1 Astyanax mexicanus 32 7e-23 106
WERAM-Drm-0094 FBpp0072043 Drosophila melanogaster 33 2e-22 105
Created Date 25-Jun-2016