WERAM Information

Tag Content
WERAM ID WERAM-Bro-0020
Ensembl Protein ID Bo1g145070.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo1g145070 Bo1g145070.1 Bo1g145070.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 3.70e-15 57.4 131 325
Organism Brassica oleracea
Domain Profile
  Me_Reader PHD
       PHD.txt   2 tiClvC.gkddegeke...mvqCdeCddwfHlkCvklplsslpeg....kswyCpsCk 51 
                    +C++C   +++g++    m+ C++C + +H +Cvk      + +    +sw CpsC+
  Bo1g145070.1 131 VMCRMCfLGESHGSERarrMLSCKTCGKKYHKNCVKSW--AQHRDlfhwSSWSCPSCR 186
                   58****7544444333466*****************99..44444456789******8 PP
       PHD.txt   3 iClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                   +C vC+++++ +k +v C+ Cd ++H +C ++p +++++g  ++Cp++++
  Bo1g145070.1 187 VCEVCRRTGDPNK-FVFCKRCDAAYHCYCQHPPHKNVSSG-PYLCPKHTR 234
                   7****87777776.*************************9.******986 PP
       PHD.txt   3 iClvCgkddegeke.......mvqCdeC 23 
                    C  C+ +  g+           +Cd C
  Bo1g145070.1 234 RCHSCDSTVPGNGLsvrwflsYTCCDAC 261
                   4555543333322223333334456666 PP
       PHD.txt   2 tiClvCgkddegeke..mvqCdeCddwfHlkCvklp....lsslpeg.....kswyCpsCk 51 
                   ++C++C k++ +++   mv+Cd C++w+H +C +++    l    +       ++ C +C+
  Bo1g145070.1 269 NYCPLCLKVYRDSEStpMVCCDLCQRWVHCHCDGISdekyL----QFqadgnLQYKCATCR 325
                   79****98888866677*******************54421....223456778******8 PP
Protein Sequence
(Fasta)		MAFHVACPIT CRRICFCSLG FPRDLRVADA KEDFLRGVRR VEDSLIDPWG SSEVVTVQVR 60
APKVRKDSIG DGGVDEAAAA EEASAQRKRV SLQRQAAVTV EAAEDYARRF ESGVNELSSN 120
DEELAQCGVN VMCRMCFLGE SHGSERARRM LSCKTCGKKY HKNCVKSWAQ HRDLFHWSSW 180
SCPSCRVCEV CRRTGDPNKF VFCKRCDAAY HCYCQHPPHK NVSSGPYLCP KHTRCHSCDS 240
TVPGNGLSVR WFLSYTCCDA CGRLFVKGNY CPLCLKVYRD SESTPMVCCD LCQRWVHCHC 300
DGISDEKYLQ FQADGNLQYK CATCRGECYQ VKDLQDAVQE LWKKKDMVDA ELVASLRAAA 360
GLPTDEEIFS ISPFSDDEEN GPVSGRSVKL SIKGLVDKSP KKSKEYRKHA SKKGHHAKSE 420
PQQDSEVHHG MESQRSRLSG TKIDSFGIQI NERSDVRSSV AGICSTHEPR IVKHKRVDDV 480
MVTDEEKPSR IVRIKCTKPH DSDSEEASVK AKKLVINLGA RKINVSDSSK SNVVSHSRDR 540
DQSSGEVRTL KISGRFGKTK SEGSKGTFGS ITQFPASTSA GSHVDDKTSI SPSLQKEARP 600
LLKFKLRKPD SGDQTSLATT QSEDEKLSSG KGQRSKRKRP SSLVDKASLE EDGETQQDSS 660
RSDEMMDANW ILKKLGKDSI GKRVEVQGSQ NSWNKGTVTD VIRDTSTLSV SLDDGSMKTF 720
ELGKHNVRFI PQKQKRPRS 739
Nucleotide Sequence
(Fasta)		ATGGCCTTTC ACGTAGCTTG CCCAATCACT TGCCGTCGGA TCTGCTTCTG CTCCCTAGGG 60
TTCCCTCGCG ATCTCCGTGT CGCCGATGCG AAAGAGGACT TTCTGAGAGG CGTTCGCCGA 120
GTGGAGGATT CTCTGATCGA TCCTTGGGGC TCTTCCGAGG TCGTTACGGT TCAGGTTAGG 180
GCTCCGAAGG TTCGTAAGGA TTCGATTGGA GATGGCGGCG TTGATGAAGC GGCGGCGGCG 240
GAGGAGGCTT CGGCGCAGAG GAAGCGCGTT TCTCTACAGA GACAAGCCGC CGTTACGGTT 300
GAAGCCGCCG AGGATTACGC TAGGAGGTTC GAATCTGGTG TTAATGAGCT TTCCTCAAAC 360
GACGAGGAGT TAGCTCAGTG TGGCGTGAAT GTGATGTGTA GAATGTGTTT CTTGGGGGAA 420
AGTCATGGAA GCGAGAGAGC GAGGAGGATG CTTTCTTGTA AAACCTGTGG GAAGAAGTAC 480
CATAAGAATT GTGTAAAGTC TTGGGCTCAA CATAGAGATT TGTTTCATTG GAGTTCATGG 540
AGTTGTCCCT CGTGCCGTGT TTGTGAGGTT TGTCGTAGAA CAGGAGATCC TAACAAGTTT 600
GTGTTCTGCA AAAGGTGTGA TGCCGCTTAC CATTGTTATT GCCAACATCC TCCACACAAG 660
AATGTAAGTT CTGGGCCATA TTTGTGCCCG AAGCATACAA GATGCCACAG CTGTGATTCT 720
ACCGTCCCTG GAAACGGCCT TAGTGTCAGG TGGTTTTTAT CATATACTTG CTGTGATGCC 780
TGTGGCAGAT TGTTTGTGAA AGGAAATTAT TGCCCTCTAT GCTTGAAGGT GTATAGGGAT 840
TCAGAATCAA CGCCAATGGT ATGCTGCGAT CTTTGTCAGC GCTGGGTGCA TTGCCATTGC 900
GACGGAATAA GTGATGAGAA ATATCTTCAG TTTCAAGCTG ATGGGAACCT ACAATATAAA 960
TGTGCCACAT GCCGTGGGGA GTGTTATCAG GTGAAGGATC TTCAGGATGC AGTTCAAGAA 1020
CTTTGGAAGA AGAAAGATAT GGTGGATGCA GAGTTGGTTG CTAGTTTAAG AGCTGCTGCT 1080
GGTTTGCCAA CAGATGAAGA AATATTTTCG ATCTCTCCAT TTTCAGATGA TGAAGAAAAC 1140
GGTCCTGTGT CTGGGCGTTC AGTGAAGCTT TCTATCAAAG GACTGGTGGA TAAATCCCCA 1200
AAGAAAAGCA AAGAGTACAG AAAACATGCT AGTAAAAAAG GTCATCATGC CAAGTCAGAG 1260
CCCCAACAGG ATTCTGAAGT TCATCACGGG ATGGAATCTC AGAGAAGCAG GCTAAGTGGT 1320
ACTAAAATTG ATAGTTTTGG GATTCAGATA AATGAACGAT CTGATGTTCG TTCTTCTGTG 1380
GCTGGAATTT GCTCAACGCA TGAACCTAGG ATTGTGAAAC ACAAGAGGGT TGATGACGTT 1440
ATGGTGACCG ATGAAGAAAA GCCATCAAGG ATAGTGAGAA TAAAGTGTAC TAAGCCTCAT 1500
GATTCTGATA GCGAGGAGGC ATCAGTAAAG GCAAAGAAGT TGGTCATTAA TCTTGGCGCG 1560
AGGAAAATAA ATGTCAGTGA TTCTTCCAAG TCCAATGTTG TTTCTCATTC GAGGGACAGA 1620
GATCAGTCTT CTGGTGAGGT ACGAACCTTG AAGATATCTG GAAGGTTTGG GAAAACTAAA 1680
TCTGAAGGAA GTAAAGGTAC TTTCGGGTCG ATCACACAGT TCCCTGCATC AACAAGCGCA 1740
GGTAGTCATG TGGATGACAA AACATCCATC TCACCATCTT TACAGAAAGA AGCTAGACCC 1800
CTGCTGAAAT TTAAACTCAG GAAACCTGAT TCGGGAGATC AGACATCTTT GGCTACAACG 1860
CAATCTGAGG ATGAAAAGCT GAGTTCTGGA AAGGGTCAAA GATCAAAGAG AAAGAGACCT 1920
TCAAGTTTAG TGGACAAGGC TTCTTTGGAG GAAGACGGTG AAACTCAGCA AGATAGTTCA 1980
AGGAGCGATG AGATGATGGA TGCTAACTGG ATTTTGAAAA AGTTGGGTAA AGATTCAATA 2040
GGAAAGAGAG TCGAAGTCCA AGGATCTCAG AACTCATGGA ATAAAGGAAC AGTAACAGAC 2100
GTTATTAGAG ACACGTCCAC ATTGTCGGTT TCTCTAGATG ATGGAAGCAT GAAGACATTT 2160
GAACTTGGGA AGCACAATGT CCGCTTCATA CCGCAGAAGC AAAAGAGGCC GAGGAGTTGA 2220
2221
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brr-0201 Bra040045.1-P Brassica rapa 97 0.0 1395
WERAM-Arl-0072 fgenesh2_kg.3__ 844__ AT3G08020.1 Arabidopsis lyrata 79 0.0 1204
WERAM-Art-0067 AT3G08020.1 Arabidopsis thaliana 79 0.0 1190
WERAM-Prp-0032 EMJ21805 Prunus persica 54 0.0 764
WERAM-Pot-0105 POPTR_0009s06460.1 Populus trichocarpa 50 0.0 745
WERAM-Glm-0137 GLYMA12G01040.1 Glycine max 50 0.0 716
WERAM-Met-0094 KEH29501 Medicago truncatula 49 0.0 697
WERAM-Thc-0017 EOX96661 Theobroma cacao 63 0.0 681
WERAM-Viv-0082 VIT_13s0064g00630.t01 Vitis vinifera 59 0.0 654
WERAM-Sol-0013 Solyc01g087430.2.1 Solanum lycopersicum 57 2e-178 623
WERAM-Mua-0133 GSMUA_Achr8P31480_001 Musa acuminata 64 2e-161 566
WERAM-Zem-0124 GRMZM2G365888_P01 Zea mays 41 3e-157 553
WERAM-Amt-0090 ERN00866 Amborella trichopoda 60 9e-151 531
WERAM-Sei-0081 Si021380m Setaria italica 42 3e-140 496
WERAM-Tra-0246 Traes_5DS_E82950B9C.1 Triticum aestivum 55 4e-130 462
WERAM-Hov-0071 MLOC_58575.1 Hordeum vulgare 56 6e-130 462
WERAM-Orr-0123 ORUFI12G15660.1 Oryza rufipogon 55 5e-127 452
WERAM-Lep-0118 LPERR12G11680.1 Leersia perrieri 52 9e-126 448
WERAM-Orgl-0120 OGLUM12G15650.1 Oryza glumaepatula 70 1e-120 431
WERAM-Orni-0122 ONIVA12G14190.1 Oryza nivara 70 1e-120 431
WERAM-Orl-0077 KN539619.1_FGP013 Oryza longistaminata 70 1e-120 431
WERAM-Orbr-0125 OB12G21490.1 Oryza brachyantha 72 1e-119 428
WERAM-Ors-0110 OS12T0527800-01 Oryza sativa 71 5e-119 426
WERAM-Orp-0113 OPUNC12G12830.1 Oryza punctata 68 5e-119 426
WERAM-Org-0115 ORGLA12G0122900.1 Oryza glaberrima 71 2e-118 424
WERAM-Brd-0094 BRADI4G06137.1 Brachypodium distachyon 68 2e-118 424
WERAM-Php-0038 PP1S184_45V6.1 Physcomitrella patens 48 2e-116 417
WERAM-Ori-0124 BGIOSGA036080-PA Oryza indica 64 7e-113 405
WERAM-Orb-0123 OBART12G14210.1 Oryza barthii 71 8e-90 329
WERAM-Sem-0114 EFJ10374 Selaginella moellendorffii 53 1e-87 322
WERAM-Orm-0107 OMERI12G10030.1 Oryza meridionalis 41 6e-51 199
WERAM-Dar-0184 ENSDARP00000115827.2 Danio rerio 36 4e-28 124
WERAM-Meg-0048 ENSMGAP00000004625.2 Meleagris gallopavo 34 8e-28 123
WERAM-Gaga-0065 ENSGALP00000010110.4 Gallus gallus 34 1e-27 122
WERAM-Anp-0025 ENSAPLP00000003226.1 Anas platyrhynchos 34 1e-27 122
WERAM-Ocp-0011 ENSOPRP00000001256.2 Ochotona princeps 34 1e-27 122
WERAM-Tag-0008 ENSTGUP00000000641.1 Taeniopygia guttata 34 1e-27 122
WERAM-Tar-0215 ENSTRUP00000044838.1 Takifugu rubripes 35 8e-27 119
WERAM-Ran-0238 ENSRNOP00000071806.1 Rattus norvegicus 34 1e-26 119
WERAM-Bot-0034 ENSBTAP00000003584.5 Bos taurus 33 1e-26 119
WERAM-Mim-0097 ENSMICP00000009069.1 Microcebus murinus 34 1e-26 119
WERAM-Lac-0079 ENSLACP00000010253.1 Latimeria chalumnae 34 1e-26 119
WERAM-Gaa-0138 ENSGACP00000017696.1 Gasterosteus aculeatus 35 1e-26 119
WERAM-Orc-0128 ENSOCUP00000011001.2 Oryctolagus cuniculus 34 1e-26 119
WERAM-Caj-0107 ENSCJAP00000018740.2 Callithrix jacchus 32 2e-26 119
WERAM-Ova-0040 ENSOARP00000005352.1 Ovis aries 33 2e-26 119
WERAM-Leo-0127 ENSLOCP00000015481.1 Lepisosteus oculatus 35 2e-26 119
WERAM-Dan-0042 ENSDNOP00000004307.3 Dasypus novemcinctus 33 2e-26 119
WERAM-Ten-0186 ENSTNIP00000018287.1 Tetraodon nigroviridis 29 2e-26 119
WERAM-Ere-0115 ENSEEUP00000012211.1 Erinaceus europaeus 33 2e-26 118
WERAM-Ict-0194 ENSSTOP00000017577.1 Ictidomys tridecemlineatus 32 2e-26 118
WERAM-Mum-0016 ENSMUSP00000006470.7 Mus musculus 34 2e-26 118
WERAM-Orla-0181 ENSORLP00000020984.1 Oryzias latipes 35 2e-26 118
WERAM-Hos-0263 ENSP00000398837.1 Homo sapiens 34 2e-26 118
WERAM-Sus-0021 ENSSSCP00000003118.2 Sus scrofa 33 2e-26 118
WERAM-Ptv-0144 ENSPVAP00000012104.1 Pteropus vampyrus 33 2e-26 118
WERAM-Myl-0129 ENSMLUP00000010443.2 Myotis lucifugus 33 3e-26 118
WERAM-Chs-0048 ENSCSAP00000000728.1 Chlorocebus sabaeus 34 3e-26 117
WERAM-Ora-0065 ENSOANP00000009850.3 Ornithorhynchus anatinus 34 3e-26 117
WERAM-Paa-0047 ENSPANP00000008627.1 Papio anubis 34 3e-26 117
WERAM-Mup-0069 ENSMPUP00000006153.1 Mustela putorius furo 33 3e-26 117
WERAM-Pat-0090 ENSPTRP00000018591.5 Pan troglodytes 32 3e-26 117
WERAM-Tut-0028 ENSTTRP00000002118.1 Tursiops truncatus 33 4e-26 117
WERAM-Otg-0054 ENSOGAP00000003714.2 Otolemur garnettii 34 4e-26 117
WERAM-Gam-0038 ENSGMOP00000003815.1 Gadus morhua 35 4e-26 117
WERAM-Gog-0190 ENSGGOP00000016403.2 Gorilla gorilla 34 4e-26 117
WERAM-Nol-0118 ENSNLEP00000013752.1 Nomascus leucogenys 34 4e-26 117
WERAM-Mam-0017 ENSMMUP00000003194.2 Macaca mulatta 32 5e-26 117
WERAM-Loa-0170 ENSLAFP00000015714.4 Loxodonta africana 33 6e-26 117
WERAM-Tub-0051 ENSTBEP00000006325.1 Tupaia belangeri 34 6e-26 117
WERAM-Caf-0080 ENSCAFP00000010253.3 Canis familiaris 33 7e-26 116
WERAM-Fec-0070 ENSFCAP00000005933.3 Felis catus 33 7e-26 116
WERAM-Aim-0005 ENSAMEP00000000356.1 Ailuropoda melanoleuca 33 7e-26 116
WERAM-Anc-0148 ENSACAP00000014142.2 Anolis carolinensis 35 9e-26 116
WERAM-Eqc-0036 ENSECAP00000005758.1 Equus caballus 34 9e-26 116
WERAM-Dio-0085 ENSDORP00000008518.1 Dipodomys ordii 34 1e-25 116
WERAM-Xim-0055 ENSXMAP00000005029.1 Xiphophorus maculatus 31 2e-25 115
WERAM-Orn-0120 ENSONIP00000012272.1 Oreochromis niloticus 35 4e-25 114
WERAM-Cap-0018 ENSCPOP00000001682.2 Cavia porcellus 32 5e-25 114
WERAM-Fia-0003 ENSFALP00000000206.1 Ficedula albicollis 32 8e-25 113
WERAM-Sah-0130 ENSSHAP00000013860.1 Sarcophilus harrisii 32 8e-25 113
WERAM-Mod-0040 ENSMODP00000005845.3 Monodelphis domestica 32 1e-24 112
WERAM-Pof-0064 ENSPFOP00000005925.2 Poecilia formosa 35 1e-24 112
WERAM-Prc-0037 ENSPCAP00000003628.1 Procavia capensis 31 2e-24 112
WERAM-Xet-0067 ENSXETP00000022279.3 Xenopus tropicalis 30 2e-24 111
WERAM-Tas-0126 ENSTSYP00000013377.1 Tarsius syrichta 32 3e-24 111
WERAM-Soa-0040 ENSSARP00000003919.1 Sorex araneus 32 5e-24 110
WERAM-Poa-0043 ENSPPYP00000005112.2 Pongo abelii 32 6e-24 110
WERAM-Mae-0064 ENSMEUP00000005938.1 Macropus eugenii 32 8e-24 110
WERAM-Pes-0058 ENSPSIP00000007945.1 Pelodiscus sinensis 34 1e-23 109
WERAM-Ect-0072 ENSETEP00000007880.1 Echinops telfairi 34 1e-23 108
WERAM-Pem-0018 ENSPMAP00000002590.1 Petromyzon marinus 33 7e-23 107
WERAM-Vip-0054 ENSVPAP00000005197.1 Vicugna pacos 34 9e-23 106
WERAM-Asm-0037 ENSAMXP00000004791.1 Astyanax mexicanus 32 1e-22 105
WERAM-Drm-0094 FBpp0072043 Drosophila melanogaster 33 1e-22 105
Created Date 25-Jun-2016