WERAM Information

Tag Content
WERAM ID WERAM-Art-0067
Ensembl Protein ID AT3G08020.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT3G08020 AT3G08020.1 AT3G08020.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.30e-12 48.4 147 340
Organism Arabidopsis thaliana
Domain Profile
  Me_Reader PHD
      PHD.txt   3 iClvC.gkddegeke...mvqCdeCddwfHlkCvklplsslpeg....kswyCpsCk 51 
                  +C++C   ++eg++    m+ C+ C + +H +C+k      + +    +sw CpsC+
  AT3G08020.1 147 MCRMCfLGEGEGSDRarrMLSCKDCGKKYHKNCLKSW--AQHRDlfhwSSWSCPSCR 201
                  7****7555555433456*****************99..44444456789******8 PP
      PHD.txt   3 iClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                  +C vC+++++ +k ++ C+ Cd ++H +C ++p +++++g  ++Cp++++
  AT3G08020.1 202 VCEVCRRTGDPNK-FMFCKRCDAAYHCYCQHPPHKNVSSG-PYLCPKHTR 249
                  7****87777777.999**********************9.******986 PP
      PHD.txt   3 iClvCgkddegeke.......mvqCdeC 23 
                   C  C+ +  g+           +Cd C
  AT3G08020.1 249 RCHSCDSTVPGNGLsvrwflsYTCCDAC 276
                  4555543333322223333334456666 PP
      PHD.txt   2 tiClvCgkddegeke..mvqCdeCddwfHlkCvklp...lsslpeg.....kswyCpsCk 51 
                  ++C+vC k++ +++   mv+Cd C++w+H +C +++        +       ++ C +C+
  AT3G08020.1 284 NYCPVCLKVYRDSEStpMVCCDICQRWVHCHCDGISddkY---MQFqvdgkLQYKCATCR 340
                  79****98888866677*******************4431...2224555678******8 PP
Protein Sequence
(Fasta)		MAFHVACPIT CRRICHCSLG FSRDLRGANA KHKFLKEVIR VEEFLKDPAV SSNVFIGGTV 60
QVRVPKVVPA PQTVSILGVG DGAIGSGVDE LAEEASAQKK RVALQRQAAV TVEAAEDYAR 120
RFESGVNDLT SNDHAGEELG HSGMNIMCRM CFLGEGEGSD RARRMLSCKD CGKKYHKNCL 180
KSWAQHRDLF HWSSWSCPSC RVCEVCRRTG DPNKFMFCKR CDAAYHCYCQ HPPHKNVSSG 240
PYLCPKHTRC HSCDSTVPGN GLSVRWFLSY TCCDACGRLF VKGNYCPVCL KVYRDSESTP 300
MVCCDICQRW VHCHCDGISD DKYMQFQVDG KLQYKCATCR GECYQVKDLQ DAVQELWKKK 360
DVVDKELIAS LRAAAGLPTE EEIFSIFPFS DDEENGPVSG RSLKFSIKGL VEKSPKKSKE 420
YGKHSSSKKH ASKKGSHTKL EPEVHQEIGS ERRRLGGVRI DNVGFQINEQ SDVNSSVAGI 480
CSTHEPKIVK HKRVDDVMVT DEEKPSRIVR IKCSKPHDSD SEDTLRNAGE EKSVKAKKLV 540
INLGARKINV SGSSKSNVVS HLSRDKDQST LGGDKVDQTG EVRTLKISGR FGKTQSEGSK 600
ATFGSVTQFP AASTSEGNHV DDKTSISPAL QKEARPLLKF KLRKPNSGDQ TSSVTTQSED 660
EKLSSAKGQR SKRKRPSSLV DMASLKEDGE ATTHSHQDNS RNDEMMDANW ILKKLGKDSI 720
GKRVEVHGSQ NSWRKGTVTD VSGDTSTLSV SLDDGSIKTF ELGKHSVRFI PQKQKRSRS 779
Nucleotide Sequence
(Fasta)		GAGAAAAGCA CCTTATCTCT GCGTCCAAAC CAAAACTCAC AGAGCTCACC AAAAGAGACG 60
ACCCTTTTTC TACTACACAA AGAAACTACT GATTAATTCA TTAATACTAA TAGAGTTATT 120
AACATTACCG ATCCTTATAT TATTATATTA AATATAAAAA AAAAAAAGAG AAAGAAGCGA 180
TCTCTAAAAA TCAAAATCTC GATTTTTTTT TTTTTTTTTC CGTTTGGAGG CGAGAGGAAT 240
AATTTTTGTT GGGGTGAGGA TATATGGGAT GGCCTTTCAC GTAGCTTGTC CAATTACATG 300
TCGTCGGATT TGCCATTGCT CCTTAGGGTT TTCTCGGGAT CTCCGTGGAG CCAATGCGAA 360
ACATAAGTTT TTGAAAGAGG TTATTCGAGT GGAGGAGTTT CTCAAGGATC CTGCTGTTTC 420
TTCTAATGTT TTTATTGGAG GTACCGTTCA AGTTAGGGTT CCTAAGGTTG TTCCTGCTCC 480
TCAGACGGTT TCGATTTTGG GGGTTGGAGA TGGTGCTATT GGTTCTGGTG TTGATGAATT 540
GGCGGAGGAA GCTTCTGCTC AGAAGAAACG TGTTGCTCTT CAGAGACAAG CTGCTGTTAC 600
TGTCGAAGCT GCTGAGGATT ATGCTCGGAG GTTTGAATCT GGTGTCAATG ACCTTACCTC 660
AAACGATCAT GCTGGTGAAG AATTAGGCCA CTCCGGCATG AATATAATGT GCAGAATGTG 720
CTTCCTAGGA GAAGGTGAAG GAAGTGATAG AGCAAGGAGG ATGCTTTCTT GTAAAGACTG 780
TGGAAAGAAG TACCACAAGA ATTGTTTAAA GTCTTGGGCT CAACATAGAG ATTTATTTCA 840
TTGGAGTTCA TGGAGTTGTC CCTCTTGCCG GGTTTGTGAG GTCTGCCGTA GAACAGGAGA 900
TCCTAACAAG TTCATGTTCT GCAAAAGGTG TGATGCTGCT TACCATTGTT ATTGCCAACA 960
TCCTCCACAC AAGAATGTTA GTTCTGGGCC ATATCTCTGC CCAAAGCATA CAAGATGCCA 1020
CAGCTGTGAT TCTACTGTCC CTGGAAATGG CCTGAGTGTC AGGTGGTTTT TATCATATAC 1080
TTGCTGTGAT GCTTGTGGCA GATTGTTTGT TAAGGGAAAT TATTGCCCTG TATGCTTGAA 1140
GGTGTATAGG GATTCGGAAT CAACCCCAAT GGTATGCTGC GATATTTGTC AACGCTGGGT 1200
GCATTGCCAT TGTGATGGAA TAAGTGATGA CAAATATATG CAGTTTCAAG TTGATGGAAA 1260
GCTACAATAT AAATGTGCCA CATGCCGTGG GGAGTGTTAT CAGGTGAAGG ATCTTCAGGA 1320
TGCAGTTCAA GAACTTTGGA AGAAAAAAGA TGTGGTGGAC AAAGAGTTGA TTGCTAGTTT 1380
AAGGGCTGCT GCTGGTTTGC CAACAGAGGA GGAAATATTT TCGATATTTC CATTTTCAGA 1440
TGATGAAGAA AATGGACCCG TATCTGGGCG CTCACTGAAG TTTTCGATTA AAGGTTTGGT 1500
GGAAAAATCC CCAAAGAAAA GCAAGGAGTA TGGGAAACAC TCTTCAAGTA AAAAGCATGC 1560
TAGTAAAAAA GGTAGTCACA CTAAGTTGGA GCCTGAAGTT CATCAGGAGA TTGGATCTGA 1620
GAGACGCCGA CTAGGTGGTG TTAGAATTGA TAATGTGGGT TTTCAGATAA ACGAACAATC 1680
GGACGTTAAT TCTTCTGTAG CTGGAATTTG CTCAACACAT GAACCTAAGA TTGTAAAACA 1740
CAAGAGGGTT GATGATGTTA TGGTGACTGA TGAAGAAAAG CCGTCAAGGA TAGTGAGAAT 1800
AAAGTGTAGC AAGCCTCATG ATTCTGATAG CGAGGATACC CTAAGGAATG CAGGGGAGGA 1860
AAAATCTGTA AAGGCAAAGA AGTTGGTTAT TAATCTGGGT GCTAGGAAAA TAAATGTCAG 1920
TGGTTCTTCG AAGTCCAATG TTGTTTCTCA TTTATCGAGA GACAAAGATC AGTCCACTTT 1980
GGGTGGGGAT AAAGTTGATC AGACTGGGGA AGTAAGAACC CTGAAGATCT CTGGAAGGTT 2040
TGGGAAAACT CAATCTGAAG GAAGTAAAGC TACATTTGGG TCAGTCACTC AGTTCCCTGC 2100
TGCATCAACA AGTGAAGGAA ATCATGTGGA TGACAAAACA TCCATCTCAC CAGCATTACA 2160
GAAAGAAGCA AGACCTCTGC TGAAATTTAA ACTCAGGAAA CCTAATTCAG GAGATCAGAC 2220
ATCTTCGGTT ACAACGCAGT CTGAAGATGA AAAATTGAGT TCTGCAAAGG GCCAAAGATC 2280
AAAGAGAAAG AGACCTTCAA GCTTAGTGGA CATGGCTTCA TTGAAAGAAG ACGGTGAAGC 2340
TACAACACAT TCTCATCAGG ATAATTCAAG GAACGACGAG ATGATGGATG CTAACTGGAT 2400
TTTGAAAAAG TTGGGTAAAG ATTCAATAGG AAAGAGAGTC GAAGTCCATG GATCTCAAAA 2460
CTCATGGCGT AAGGGAACAG TGACAGACGT TTCTGGAGAC ACATCCACAT TGTCGGTTTC 2520
TCTAGATGAT GGAAGCATCA AGACATTTGA ACTTGGGAAG CACAGTGTCC GCTTCATACC 2580
GCAAAAGCAA AAGAGGTCAA GGAGCTGATT GGACCATCGA GCAGCGCTTT AGTCACTAAC 2640
TTTCTGCATG CGAGCCATGA AGAAGATTTG ATTGTTGGGG CATTTTATAC TATTTAAGCT 2700
CTTTCTGGTG GTAATTATCA GTAAGATGGA AAGTGCCAAA CTGTGTAGAT ATTACTTGTG 2760
GTGTTGAAGG TAGCTATGAT CTTGTTAAGA CTCGATTGGT CGTTCCCTGT AACTTACTCA 2820
CTTCCTAGGT CCATAGTTTT TGCAGACTCA TGTAACAATT TGTTCAAATT CAAGCATGTC 2880
AGAAATCTGT TACTAAATGG CAAAATATGG TATAAACATT TATC 2925
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Arl-0072 fgenesh2_kg.3__ 844__ AT3G08020.1 Arabidopsis lyrata 97 0.0 1495
WERAM-Bro-0020 Bo1g145070.1 Brassica oleracea 78 0.0 1191
WERAM-Brr-0201 Bra040045.1-P Brassica rapa 78 0.0 1182
WERAM-Thc-0017 EOX96661 Theobroma cacao 55 0.0 858
WERAM-Prp-0032 EMJ21805 Prunus persica 56 0.0 787
WERAM-Pot-0105 POPTR_0009s06460.1 Populus trichocarpa 51 0.0 769
WERAM-Glm-0137 GLYMA12G01040.1 Glycine max 51 0.0 745
WERAM-Met-0094 KEH29501 Medicago truncatula 50 0.0 740
WERAM-Sol-0013 Solyc01g087430.2.1 Solanum lycopersicum 49 0.0 730
WERAM-Mua-0133 GSMUA_Achr8P31480_001 Musa acuminata 49 0.0 687
WERAM-Viv-0082 VIT_13s0064g00630.t01 Vitis vinifera 57 0.0 686
WERAM-Zem-0124 GRMZM2G365888_P01 Zea mays 43 2e-168 590
WERAM-Tra-0246 Traes_5DS_E82950B9C.1 Triticum aestivum 42 8e-157 551
WERAM-Lep-0118 LPERR12G11680.1 Leersia perrieri 41 8e-156 548
WERAM-Amt-0090 ERN00866 Amborella trichopoda 61 7e-154 541
WERAM-Orr-0123 ORUFI12G15660.1 Oryza rufipogon 40 9e-153 538
WERAM-Orbr-0125 OB12G21490.1 Oryza brachyantha 45 5e-147 519
WERAM-Orl-0077 KN539619.1_FGP013 Oryza longistaminata 43 1e-146 518
WERAM-Orni-0122 ONIVA12G14190.1 Oryza nivara 43 1e-146 518
WERAM-Orgl-0120 OGLUM12G15650.1 Oryza glumaepatula 42 2e-146 517
WERAM-Sei-0081 Si021380m Setaria italica 43 3e-146 516
WERAM-Ors-0110 OS12T0527800-01 Oryza sativa 43 1e-144 511
WERAM-Orp-0113 OPUNC12G12830.1 Oryza punctata 43 2e-144 510
WERAM-Org-0115 ORGLA12G0122900.1 Oryza glaberrima 43 4e-144 509
WERAM-Hov-0071 MLOC_58575.1 Hordeum vulgare 56 4e-134 476
WERAM-Php-0038 PP1S184_45V6.1 Physcomitrella patens 48 3e-120 430
WERAM-Brd-0094 BRADI4G06137.1 Brachypodium distachyon 69 9e-120 428
WERAM-Ori-0124 BGIOSGA036080-PA Oryza indica 64 2e-115 414
WERAM-Orb-0123 OBART12G14210.1 Oryza barthii 40 8e-114 409
WERAM-Sem-0109 EFJ19680 Selaginella moellendorffii 55 2e-88 324
WERAM-Orm-0107 OMERI12G10030.1 Oryza meridionalis 32 4e-74 277
WERAM-Dar-0184 ENSDARP00000115827.2 Danio rerio 35 7e-28 123
WERAM-Ocp-0011 ENSOPRP00000001256.2 Ochotona princeps 32 1e-27 122
WERAM-Ran-0238 ENSRNOP00000071806.1 Rattus norvegicus 31 1e-26 119
WERAM-Orc-0128 ENSOCUP00000011001.2 Oryctolagus cuniculus 33 1e-26 119
WERAM-Mim-0097 ENSMICP00000009069.1 Microcebus murinus 33 1e-26 119
WERAM-Meg-0048 ENSMGAP00000004625.2 Meleagris gallopavo 33 1e-26 119
WERAM-Gaga-0065 ENSGALP00000010110.4 Gallus gallus 33 1e-26 119
WERAM-Bot-0034 ENSBTAP00000003584.5 Bos taurus 32 1e-26 119
WERAM-Caj-0107 ENSCJAP00000018740.2 Callithrix jacchus 31 1e-26 119
WERAM-Anp-0025 ENSAPLP00000003226.1 Anas platyrhynchos 33 1e-26 119
WERAM-Tag-0008 ENSTGUP00000000641.1 Taeniopygia guttata 33 1e-26 119
WERAM-Mum-0016 ENSMUSP00000006470.7 Mus musculus 31 1e-26 119
WERAM-Ptv-0144 ENSPVAP00000012104.1 Pteropus vampyrus 31 1e-26 119
WERAM-Ova-0040 ENSOARP00000005352.1 Ovis aries 32 1e-26 119
WERAM-Dan-0042 ENSDNOP00000004307.3 Dasypus novemcinctus 32 2e-26 119
WERAM-Ict-0194 ENSSTOP00000017577.1 Ictidomys tridecemlineatus 31 2e-26 119
WERAM-Ere-0115 ENSEEUP00000012211.1 Erinaceus europaeus 32 2e-26 119
WERAM-Sus-0021 ENSSSCP00000003118.2 Sus scrofa 32 2e-26 118
WERAM-Hos-0263 ENSP00000398837.1 Homo sapiens 32 2e-26 118
WERAM-Pat-0090 ENSPTRP00000018591.5 Pan troglodytes 32 2e-26 118
WERAM-Myl-0129 ENSMLUP00000010443.2 Myotis lucifugus 32 2e-26 118
WERAM-Paa-0047 ENSPANP00000008627.1 Papio anubis 32 2e-26 118
WERAM-Chs-0048 ENSCSAP00000000728.1 Chlorocebus sabaeus 32 3e-26 118
WERAM-Tut-0028 ENSTTRP00000002118.1 Tursiops truncatus 31 3e-26 118
WERAM-Otg-0054 ENSOGAP00000003714.2 Otolemur garnettii 32 3e-26 118
WERAM-Gog-0190 ENSGGOP00000016403.2 Gorilla gorilla 31 3e-26 117
WERAM-Mup-0069 ENSMPUP00000006153.1 Mustela putorius furo 32 3e-26 117
WERAM-Mam-0017 ENSMMUP00000003194.2 Macaca mulatta 31 3e-26 117
WERAM-Nol-0118 ENSNLEP00000013752.1 Nomascus leucogenys 32 4e-26 117
WERAM-Loa-0170 ENSLAFP00000015714.4 Loxodonta africana 32 5e-26 117
WERAM-Tub-0051 ENSTBEP00000006325.1 Tupaia belangeri 32 5e-26 117
WERAM-Fec-0070 ENSFCAP00000005933.3 Felis catus 31 6e-26 117
WERAM-Aim-0005 ENSAMEP00000000356.1 Ailuropoda melanoleuca 31 6e-26 117
WERAM-Eqc-0036 ENSECAP00000005758.1 Equus caballus 33 7e-26 116
WERAM-Caf-0080 ENSCAFP00000010253.3 Canis familiaris 31 7e-26 116
WERAM-Dio-0085 ENSDORP00000008518.1 Dipodomys ordii 31 8e-26 116
WERAM-Leo-0127 ENSLOCP00000015481.1 Lepisosteus oculatus 35 1e-25 115
WERAM-Gaa-0138 ENSGACP00000017696.1 Gasterosteus aculeatus 33 1e-25 115
WERAM-Ten-0186 ENSTNIP00000018287.1 Tetraodon nigroviridis 29 2e-25 115
WERAM-Ora-0065 ENSOANP00000009850.3 Ornithorhynchus anatinus 33 2e-25 115
WERAM-Lac-0079 ENSLACP00000010253.1 Latimeria chalumnae 32 2e-25 115
WERAM-Tar-0071 ENSTRUP00000014027.1 Takifugu rubripes 29 4e-25 114
WERAM-Orla-0181 ENSORLP00000020984.1 Oryzias latipes 32 8e-25 113
WERAM-Gam-0038 ENSGMOP00000003815.1 Gadus morhua 33 9e-25 113
WERAM-Anc-0148 ENSACAP00000014142.2 Anolis carolinensis 32 2e-24 112
WERAM-Orn-0025 ENSONIP00000003449.1 Oreochromis niloticus 33 2e-24 111
WERAM-Xim-0055 ENSXMAP00000005029.1 Xiphophorus maculatus 29 4e-24 110
WERAM-Cap-0018 ENSCPOP00000001682.2 Cavia porcellus 32 4e-24 110
WERAM-Sah-0130 ENSSHAP00000013860.1 Sarcophilus harrisii 32 6e-24 110
WERAM-Xet-0067 ENSXETP00000022279.3 Xenopus tropicalis 29 1e-23 109
WERAM-Asm-0037 ENSAMXP00000004791.1 Astyanax mexicanus 31 1e-23 109
WERAM-Pof-0093 ENSPFOP00000008184.2 Poecilia formosa 31 1e-23 109
WERAM-Mod-0122 ENSMODP00000017499.3 Monodelphis domestica 30 2e-23 108
WERAM-Tas-0126 ENSTSYP00000013377.1 Tarsius syrichta 32 2e-23 108
WERAM-Prc-0037 ENSPCAP00000003628.1 Procavia capensis 29 2e-23 108
WERAM-Fia-0003 ENSFALP00000000206.1 Ficedula albicollis 30 2e-23 108
WERAM-Poa-0043 ENSPPYP00000005112.2 Pongo abelii 31 3e-23 108
WERAM-Pes-0058 ENSPSIP00000007945.1 Pelodiscus sinensis 33 3e-23 108
WERAM-Mae-0133 ENSMEUP00000013331.1 Macropus eugenii 30 4e-23 107
WERAM-Ect-0072 ENSETEP00000007880.1 Echinops telfairi 33 4e-23 107
WERAM-Soa-0040 ENSSARP00000003919.1 Sorex araneus 30 8e-23 106
WERAM-Vip-0054 ENSVPAP00000005197.1 Vicugna pacos 34 9e-23 106
WERAM-Pem-0018 ENSPMAP00000002590.1 Petromyzon marinus 31 2e-21 102
WERAM-Drm-0094 FBpp0072043 Drosophila melanogaster 31 5e-21 100
WERAM-Cae-0045 T12D8.1 Caenorhabditis elegans 30 5e-21 100
Created Date 25-Jun-2016