| Tag |
Content |
| WERAM ID |
WERAM-Brr-0170 |
| Ensembl Protein ID |
Bra034494.1-P |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDM |
JHDM2 |
4.00e-73 |
246.5 |
402 |
630 |
|
| Organism |
Brassica rapa |
| Domain Profile |
HDM JHDM2
JHDM2.txt 4 krdgklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvy.............vgilkkkwaeedl.....kellksie 81
+r+g lN+a klp+ +++pdlgPk+y AyG+ e +r++++t+lh+d+sdavnil++ v k+k++e+++ + + s e
Bra034494.1-P 402 PRTGILNIAAKLPEALIKPDLGPKTYIAYGIPDELGRGDSVTKLHCDMSDAVNILTHtaeitlsqeqisaVKDIKQKHKEQNKfeergYGVACSQE 497
47899*****************************************************99999999987744444443333221111123333333 PP
JHDM2.txt 82 eeeldevtrkrvqdpkekpgalWhifaakdaekirellekvskeqga....evppdhdpihdqswyldrklrkrLfeeyGvegwtlvQklgdavli 173
eee+ ++ ++ +e+ +alW+if+++d++k++e+l+k++ke+++ +v ++++pihdqs+yl+ +++++L+ e+G+e+wt+vQklg+av+i
Bra034494.1-P 498 EEEM-NMPEILSHEKDETGSALWDIFRREDVPKLEEYLRKHCKEFRHayccPVTKVYHPIHDQSCYLTVEHKRKLKAEFGIEPWTFVQKLGEAVFI 592
3333.455555577788899***************************99999999***************************************** PP
JHDM2.txt 174 pagapHqvqnlkscvkvaedFvsPEnvkecfrltkeyr 211
pag+pHqv+nlksc kva dFvsPEn+kec+rlt+e+r
Bra034494.1-P 593 PAGCPHQVRNLKSCTKVAVDFVSPENIKECLRLTEEFR 630
************************************98 PP
|
Protein Sequence
(Fasta) | MYCLQCTRKW YPELPEDDVV DKCPSCRKNC NCSRCLHLNG LIKTSNKELS ISERRHHLQY 60
LISLMLPFLK TISESQSEEI EIEAKVQGIL PSEVDVKRAV SYCDERVYCD HCATSIVDLH 120
RSCPKCSYEL CLKCCQEIRQ GSISERPEIK LHYVDKGYKY MHGLEMEPSS SSVSEEDEEA 180
KPSPQWNAGA NGSITCAPKA LGGCGECTLK LQRILPRMRM SDLEQKAETL LASYIISLPR 240
ELNCKCSALE TDMRRKAASR MRSSDNYLFC PDSIDVLKEE VLLHFQEHWA KGEPVIARNV 300
LDSTPGLSWE PMVMWRALCD SSTSSSKIIS HVKAIDCLSQ CEVDVNTRDF FEGYSKGRTY 360
ENFWPEMLKL KDWPPSDKFE DLLPRHCDEF ISALPFQEYS DPRTGILNIA AKLPEALIKP 420
DLGPKTYIAY GIPDELGRGD SVTKLHCDMS DAVNILTHTA EITLSQEQIS AVKDIKQKHK 480
EQNKFEERGY GVACSQEEEE MNMPEILSHE KDETGSALWD IFRREDVPKL EEYLRKHCKE 540
FRHAYCCPVT KVYHPIHDQS CYLTVEHKRK LKAEFGIEPW TFVQKLGEAV FIPAGCPHQV 600
RNLKSCTKVA VDFVSPENIK ECLRLTEEFR QLPKNHKARE DKLEASLFSL YQLINVFFLL 660
LLYVRVLVFI KKMVIYAIEQ ALIELETLPE ESKPMAQ 697Protein Fasta Sequence
>Bra034494.1-P|JHDM2|Brassica rapa
MYCLQCTRKWYPELPEDDVVDKCPSCRKNCNCSRCLHLNGLIKTSNKELSISERRHHLQYLISLMLPFLKTISESQSEEIEIEAKVQGILPSEVDVKRAVSYCDERVYCDHCATSIVDLHRSCPKCSYELCLKCCQEIRQGSISERPEIKLHYVDKGYKYMHGLEMEPSSSSVSEEDEEAKPSPQWNAGANGSITCAPKALGGCGECTLKLQRILPRMRMSDLEQKAETLLASYIISLPRELNCKCSALETDMRRKAASRMRSSDNYLFCPDSIDVLKEEVLLHFQEHWAKGEPVIARNVLDSTPGLSWEPMVMWRALCDSSTSSSKIISHVKAIDCLSQCEVDVNTRDFFEGYSKGRTYENFWPEMLKLKDWPPSDKFEDLLPRHCDEFISALPFQEYSDPRTGILNIAAKLPEALIKPDLGPKTYIAYGIPDELGRGDSVTKLHCDMSDAVNILTHTAEITLSQEQISAVKDIKQKHKEQNKFEERGYGVACSQEEEEMNMPEILSHEKDETGSALWDIFRREDVPKLEEYLRKHCKEFRHAYCCPVTKVYHPIHDQSCYLTVEHKRKLKAEFGIEPWTFVQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENIKECLRLTEEFRQLPKNHKAREDKLEASLFSLYQLINVFFLLLLYVRVLVFIKKMVIYAIEQALIELETLPEESKPMAQ |
Nucleotide Sequence
(Fasta) | ATGTACTGTC TTCAATGTAC AAGGAAATGG TATCCAGAGT TACCTGAGGA TGATGTCGTT 60
GACAAATGCC CTTCCTGCCG CAAAAACTGT AACTGCAGCA GATGCTTGCA TTTGAATGGT 120
TTAATCAAGA CATCGAACAA GGAACTCTCA ATTTCTGAAA GACGCCATCA TCTTCAATAC 180
TTGATTTCAC TGATGCTTCC ATTTCTGAAA ACAATATCTG AATCCCAGAG TGAAGAGATT 240
GAAATTGAGG CAAAGGTTCA AGGAATACTG CCATCTGAAG TTGATGTAAA GAGGGCAGTA 300
AGCTACTGTG ATGAACGTGT ATACTGTGAT CATTGCGCAA CTTCAATCGT TGACTTGCAC 360
CGGAGCTGCC CAAAGTGCTC TTACGAGCTT TGTCTGAAAT GCTGCCAAGA GATTCGCCAA 420
GGATCGATCT CTGAACGCCC TGAAATAAAG TTACACTATG TTGACAAAGG ATACAAGTAT 480
ATGCATGGTC TAGAAATGGA GCCGAGCTCC TCTTCTGTAT CTGAGGAGGA CGAAGAAGCT 540
AAACCATCCC CCCAGTGGAA TGCTGGCGCC AACGGAAGTA TCACTTGTGC ACCAAAAGCA 600
CTAGGTGGTT GCGGTGAATG TACGTTGAAG CTTCAGCGAA TCTTACCGCG GATGCGGATG 660
TCAGACTTGG AACAAAAGGC TGAGACTCTC TTGGCATCGT ACATTATAAG CCTCCCTAGA 720
GAATTGAACT GTAAGTGCTC TGCCTTGGAG ACAGATATGA GAAGGAAAGC AGCTTCGAGG 780
ATGAGATCAA GCGACAACTA CTTGTTCTGC CCTGATTCAA TTGATGTCTT GAAGGAAGAA 840
GTGCTTCTGC ATTTCCAAGA GCATTGGGCA AAAGGTGAAC CGGTAATCGC CAGGAACGTT 900
CTTGATAGCA CACCTGGTTT AAGCTGGGAG CCGATGGTTA TGTGGCGAGC TTTATGCGAT 960
TCATCAACAT CAAGTTCTAA GATCATCTCT CACGTCAAAG CAATTGATTG TTTATCTCAG 1020
TGTGAGGTGG ATGTGAACAC TCGTGACTTC TTTGAAGGTT ACAGCAAGGG AAGAACATAT 1080
GAAAACTTCT GGCCTGAGAT GTTGAAGCTA AAGGACTGGC CTCCTTCCGA TAAATTTGAA 1140
GATCTTTTAC CTCGCCACTG TGACGAGTTC ATATCCGCAT TACCTTTCCA AGAATATAGC 1200
GACCCTAGAA CTGGGATTCT GAACATTGCA GCAAAGCTTC CTGAAGCACT CATCAAACCG 1260
GACCTGGGTC CTAAGACTTA CATTGCCTAT GGGATTCCGG ACGAGCTCGG TAGAGGCGAT 1320
TCCGTGACCA AGCTTCACTG TGATATGTCT GATGCGGTTA ATATACTGAC GCATACGGCT 1380
GAGATAACGT TAAGTCAAGA ACAGATATCT GCAGTTAAAG ATATAAAGCA GAAACACAAG 1440
GAACAGAACA AGTTCGAAGA ACGTGGCTAT GGTGTTGCAT GTAGCCAAGA GGAAGAAGAA 1500
ATGAACATGC CAGAGATTCT AAGCCATGAA AAGGATGAAA CGGGAAGTGC TCTTTGGGAC 1560
ATATTTAGGA GAGAAGATGT TCCCAAGTTG GAAGAGTATC TGAGAAAACA TTGTAAAGAG 1620
TTTAGGCACG CTTATTGTTG CCCAGTCACA AAGGTTTATC ATCCGATACA TGACCAATCA 1680
TGCTATTTAA CCGTTGAGCA TAAAAGAAAA CTCAAGGCGG AGTTCGGGAT CGAACCATGG 1740
ACGTTTGTGC AAAAGCTAGG AGAAGCCGTG TTTATTCCTG CCGGCTGTCC TCATCAAGTT 1800
CGGAATCTGA AGTCGTGCAC AAAAGTGGCA GTAGACTTTG TATCACCAGA GAACATTAAA 1860
GAGTGTCTGC GTCTGACAGA GGAGTTTCGC CAACTTCCGA AGAACCATAA GGCCAGAGAG 1920
GACAAACTTG AGGCAAGTCT TTTCTCTCTT TACCAATTAA TCAATGTCTT CTTTTTGTTG 1980
TTGTTGTATG TTCGTGTGCT TGTGTTTATA AAGAAGATGG TGATCTATGC GATCGAGCAA 2040
GCTCTCATAG AACTTGAGAC GTTACCAGAA GAGTCCAAAC CAATGGCCCA ATAG
2095Nucleotide Fasta Sequence
>Bra034494.1-P|JHDM2|Brassica rapa
ATGTACTGTCTTCAATGTACAAGGAAATGGTATCCAGAGTTACCTGAGGATGATGTCGTTGACAAATGCCCTTCCTGCCGCAAAAACTGTAACTGCAGCAGATGCTTGCATTTGAATGGTTTAATCAAGACATCGAACAAGGAACTCTCAATTTCTGAAAGACGCCATCATCTTCAATACTTGATTTCACTGATGCTTCCATTTCTGAAAACAATATCTGAATCCCAGAGTGAAGAGATTGAAATTGAGGCAAAGGTTCAAGGAATACTGCCATCTGAAGTTGATGTAAAGAGGGCAGTAAGCTACTGTGATGAACGTGTATACTGTGATCATTGCGCAACTTCAATCGTTGACTTGCACCGGAGCTGCCCAAAGTGCTCTTACGAGCTTTGTCTGAAATGCTGCCAAGAGATTCGCCAAGGATCGATCTCTGAACGCCCTGAAATAAAGTTACACTATGTTGACAAAGGATACAAGTATATGCATGGTCTAGAAATGGAGCCGAGCTCCTCTTCTGTATCTGAGGAGGACGAAGAAGCTAAACCATCCCCCCAGTGGAATGCTGGCGCCAACGGAAGTATCACTTGTGCACCAAAAGCACTAGGTGGTTGCGGTGAATGTACGTTGAAGCTTCAGCGAATCTTACCGCGGATGCGGATGTCAGACTTGGAACAAAAGGCTGAGACTCTCTTGGCATCGTACATTATAAGCCTCCCTAGAGAATTGAACTGTAAGTGCTCTGCCTTGGAGACAGATATGAGAAGGAAAGCAGCTTCGAGGATGAGATCAAGCGACAACTACTTGTTCTGCCCTGATTCAATTGATGTCTTGAAGGAAGAAGTGCTTCTGCATTTCCAAGAGCATTGGGCAAAAGGTGAACCGGTAATCGCCAGGAACGTTCTTGATAGCACACCTGGTTTAAGCTGGGAGCCGATGGTTATGTGGCGAGCTTTATGCGATTCATCAACATCAAGTTCTAAGATCATCTCTCACGTCAAAGCAATTGATTGTTTATCTCAGTGTGAGGTGGATGTGAACACTCGTGACTTCTTTGAAGGTTACAGCAAGGGAAGAACATATGAAAACTTCTGGCCTGAGATGTTGAAGCTAAAGGACTGGCCTCCTTCCGATAAATTTGAAGATCTTTTACCTCGCCACTGTGACGAGTTCATATCCGCATTACCTTTCCAAGAATATAGCGACCCTAGAACTGGGATTCTGAACATTGCAGCAAAGCTTCCTGAAGCACTCATCAAACCGGACCTGGGTCCTAAGACTTACATTGCCTATGGGATTCCGGACGAGCTCGGTAGAGGCGATTCCGTGACCAAGCTTCACTGTGATATGTCTGATGCGGTTAATATACTGACGCATACGGCTGAGATAACGTTAAGTCAAGAACAGATATCTGCAGTTAAAGATATAAAGCAGAAACACAAGGAACAGAACAAGTTCGAAGAACGTGGCTATGGTGTTGCATGTAGCCAAGAGGAAGAAGAAATGAACATGCCAGAGATTCTAAGCCATGAAAAGGATGAAACGGGAAGTGCTCTTTGGGACATATTTAGGAGAGAAGATGTTCCCAAGTTGGAAGAGTATCTGAGAAAACATTGTAAAGAGTTTAGGCACGCTTATTGTTGCCCAGTCACAAAGGTTTATCATCCGATACATGACCAATCATGCTATTTAACCGTTGAGCATAAAAGAAAACTCAAGGCGGAGTTCGGGATCGAACCATGGACGTTTGTGCAAAAGCTAGGAGAAGCCGTGTTTATTCCTGCCGGCTGTCCTCATCAAGTTCGGAATCTGAAGTCGTGCACAAAAGTGGCAGTAGACTTTGTATCACCAGAGAACATTAAAGAGTGTCTGCGTCTGACAGAGGAGTTTCGCCAACTTCCGAAGAACCATAAGGCCAGAGAGGACAAACTTGAGGCAAGTCTTTTCTCTCTTTACCAATTAATCAATGTCTTCTTTTTGTTGTTGTTGTATGTTCGTGTGCTTGTGTTTATAAAGAAGATGGTGATCTATGCGATCGAGCAAGCTCTCATAGAACTTGAGACGTTACCAGAAGAGTCCAAACCAATGGCCCAATAG
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
