WERAM Information

Tag Content
WERAM ID WERAM-Brr-0090
Ensembl Protein ID Bra017226.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra017226 Bra017226.1 Bra017226.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.70e-10 41.9 400 794
Organism Brassica rapa
Domain Profile
  Me_Reader PHD
        PHD.txt  43 kswyCpsCk 51 
                    k ++C++Ck
  Bra017226.1-P 400 KCFTCKRCK 408
                    235555554 PP
        PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                    ++C++C  d+ +   ++ Cd+C+++fH++Cv+lp  s+p g +w+C+ C++
  Bra017226.1-P 643 DLCVIC-ADGGN---LLRCDSCPRAFHIECVSLP--SIPRG-NWHCKYCEK 686
                    58****.66666...9******************..*****.*******86 PP
        PHD.txt   4 ClvCg.....kddegekemvqCdeCddwfHlkCvklp.............lsslpegkswyCp 48 
                    C++C+     ++++g ++++ Cd+C++ +H+ C++                s+lp+g +w+C 
  Bra017226.1-P 733 CVLCSgsdfcRSGFGPRTIIICDQCEKEYHIGCLSSHnivdlkvtaynsiPSELPKG-NWFCS 794
                    777742222244455555****************99999999999988888888888.9**97 PP
Protein Sequence
(Fasta)		MNQNNKNKVA WSPIRADSFA MKEEFAPGGG GEISSVKRMA LDGDERSGIS CKRIKTTLVN 60
GFIVYTRTRR TKLNKVNEED ELKPTDEVAI NDPIAESSCV KNTVVESFVE RTAVEERLVT 120
GSLAESNIAE SSCVNNTVVE SSVERTVEEE RVVTGSLAEI MADDKFKEVD TESGSGCSLV 180
DVVIDDIQFE ELLHEAIPVE ILPEGSLDFE VAKDRTMGKR YLASKANRHG SLKRTKKMYK 240
SLLRLKKVNN VVSKDAEVLA GSELDSEGLD EQNLSMSLAG ISNVVVRKRP DTVRELFETG 300
ILDGVSVVYT GTAQSQGFGL RGIITDGGIL CSCSSCDWAN VITTSQFEIH ANKQYKRASQ 360
YICFENGKSL LDVLKICRNA PLHSLRAKVL DAVDSASKEK CFTCKRCKGV CPLSSLGHRG 420
LLCLSCSEIE NSQSSPTATW TPTSAPACIT SLAKSRWKIT RKRSESTLKS PLSISPLGNS 480
TQEITRKALR QALVGKALSA STNISSHNKC RSEFNMLAQH SVTPKALKSV PLSVSSKKRS 540
CRTTRRDQGL HKLVFEREGL PDGTELGYYA RGQKLLGGHK MGAGIYCYCC KCEVSPSVFE 600
AHAGWTSRRK PYFYIYTSNG VSLHEWAMTF SQGRKYSANE NDDLCVICAD GGNLLRCDSC 660
PRAFHIECVS LPSIPRGNWH CKYCEKNSKT ETIGEYNVNS SAPSQLEGVD HADQLAGRCI 720
RVVKNMEAET NGCVLCSGSD FCRSGFGPRT IIICDQCEKE YHIGCLSSHN IVDLKVTAYN 780
SIPSELPKGN WFCSMDCTRI NSTLQKLLLG GAETLSGSSL EIIRMKQGIT DVDSVSHLDI 840
RWRLISGKVT SPESRMLLSQ ALAIFHDCFD PIVDPVSGRN LIPRMVYGKS MQGQDYGGIC 900
CAVLTVNATV VSAGLLRVFG REVAELPLVA TRMCSREKGY FQLLFSCVEK LLSFLNVESI 960
MVPAAEEAEP LWMNKFGFRK LAPEQLSKYV KVSYQMVRFK GASMLQKPVH SHLITDKKTE 1020
AEHNFDLKQP KESLKMDGRV DE 1042
Nucleotide Sequence
(Fasta)		ATGAACCAGA ATAACAAAAA TAAAGTTGCA TGGAGTCCGA TTAGAGCAGA TTCGTTTGCT 60
ATGAAGGAAG AGTTTGCCCC CGGCGGTGGC GGCGAGATCA GTTCGGTTAA GCGGATGGCC 120
TTAGACGGCG ACGAGAGGAG TGGGATTAGC TGTAAGCGAA TCAAAACGAC TCTGGTCAAT 180
GGTTTTATCG TTTACACTAG AACGAGGAGG ACTAAACTCA ATAAGGTTAA CGAAGAAGAC 240
GAGTTGAAGC CAACAGATGA AGTTGCAATC AATGATCCAA TAGCTGAGAG TTCTTGCGTT 300
AAGAATACAG TTGTTGAGAG CTTTGTGGAG AGAACTGCTG TGGAAGAGCG CTTAGTTACT 360
GGCAGCTTAG CTGAATCTAA CATCGCTGAG AGTTCTTGCG TTAATAATAC AGTTGTTGAG 420
AGCTCTGTGG AGAGAACTGT TGAGGAAGAG CGCGTAGTTA CTGGCAGCTT AGCTGAGATT 480
ATGGCGGATG ATAAGTTCAA AGAAGTGGAT ACTGAGAGTG GTAGTGGTTG CTCATTAGTC 540
GATGTTGTGA TTGATGATAT ACAGTTTGAA GAATTGTTAC ATGAAGCGAT TCCAGTAGAG 600
ATTCTTCCCG AAGGGAGCTT GGATTTTGAG GTAGCTAAAG ACAGAACCAT GGGAAAACGC 660
TATTTGGCGT CAAAGGCGAA TAGGCATGGA TCTTTGAAGC GTACAAAGAA GATGTATAAA 720
TCGCTTTTGA GACTGAAGAA GGTAAACAAT GTAGTCTCTA AGGATGCAGA GGTTCTGGCA 780
GGATCAGAAT TGGATAGTGA GGGGTTGGAT GAACAGAATC TTTCTATGAG TCTGGCTGGC 840
ATTTCCAATG TAGTAGTCCG CAAAAGGCCA GATACAGTGA GGGAACTTTT TGAGACTGGT 900
ATACTTGATG GTGTGTCGGT GGTTTACACG GGTACTGCTC AGTCTCAAGG CTTTGGTCTC 960
CGTGGCATCA TTACGGATGG TGGAATTTTG TGTTCGTGTT CCTCCTGTGA TTGGGCTAAT 1020
GTTATTACAA CTTCCCAATT TGAGATTCAT GCTAATAAGC AATACAAACG AGCATCACAG 1080
TATATTTGCT TTGAGAATGG TAAGAGCCTA CTAGATGTTC TGAAGATTTG TAGGAACGCT 1140
CCTCTACATT CTCTTCGAGC AAAAGTTCTT GATGCTGTTG ATAGTGCGTC TAAAGAAAAA 1200
TGCTTCACCT GTAAAAGATG CAAAGGCGTG TGCCCTTTAT CCTCTCTTGG CCATAGAGGG 1260
TTACTGTGTT TGTCATGCTC AGAGATAGAA AATTCCCAGA GTAGCCCTAC TGCGACATGG 1320
ACCCCAACTA GTGCTCCTGC GTGCATAACA TCTCTGGCTA AGAGCAGATG GAAGATAACA 1380
AGAAAGCGAT CAGAATCCAC ATTAAAGTCG CCTCTATCGA TATCCCCACT GGGAAATAGC 1440
ACTCAGGAGA TCACAAGAAA GGCATTACGT CAAGCTTTGG TTGGGAAGGC TCTCAGTGCT 1500
TCTACAAATA TATCTTCACA TAATAAGTGC AGATCTGAGT TTAATATGTT AGCCCAACAT 1560
TCTGTGACCC CCAAGGCTTT AAAAAGCGTG CCCCTTTCTG TTTCTTCAAA AAAGAGGAGT 1620
TGTAGAACAA CGAGAAGGGA TCAGGGATTG CATAAATTAG TGTTTGAGAG AGAGGGATTA 1680
CCAGATGGAA CTGAACTAGG ATACTACGCC CGCGGACAGA AATTGCTCGG AGGCCACAAA 1740
ATGGGTGCCG GAATTTACTG TTACTGCTGC AAGTGTGAGG TGAGCCCATC CGTGTTCGAA 1800
GCTCATGCAG GCTGGACATC TCGCAGAAAA CCTTATTTTT ACATATATAC ATCTAATGGT 1860
GTGTCTCTTC ACGAATGGGC AATGACTTTC TCACAAGGCC GGAAATATTC TGCTAATGAA 1920
AATGACGACT TGTGTGTCAT TTGTGCCGAT GGTGGAAATC TTCTGCGCTG CGATAGCTGC 1980
CCAAGAGCCT TCCACATAGA ATGTGTTTCC CTTCCAAGTA TTCCTCGTGG TAACTGGCAT 2040
TGCAAATACT GCGAGAAAAA TTCCAAGACC GAGACTATTG GAGAGTACAA TGTTAATTCT 2100
TCTGCACCTA GTCAACTAGA AGGAGTTGAT CATGCTGATC AGTTAGCTGG ACGATGCATT 2160
CGAGTTGTCA AGAACATGGA AGCTGAAACA AATGGGTGTG TACTATGCAG TGGTTCTGAT 2220
TTTTGCAGAT CCGGATTCGG GCCACGAACG ATCATAATAT GTGATCAGTG TGAAAAGGAG 2280
TACCACATTG GATGTCTGAG TAGTCATAAC ATTGTGGATT TAAAGGTGAC GGCATATAAC 2340
TCTATACCCA GCGAATTACC TAAAGGAAAT TGGTTTTGCT CTATGGACTG TACGAGGATA 2400
AACTCCACTT TGCAGAAGTT ACTGCTTGGT GGGGCGGAGA CACTTTCAGG TTCTTCTTTG 2460
GAAATAATAC GCATGAAGCA AGGAATAACT GATGTTGATT CCGTCAGTCA TCTAGACATC 2520
AGATGGAGAC TGATCAGCGG CAAAGTTACT TCTCCTGAAA GCCGGATGTT ACTGTCTCAA 2580
GCATTGGCTA TTTTTCATGA TTGCTTTGAT CCTATAGTTG ATCCAGTTTC AGGGCGCAAT 2640
CTTATTCCAA GAATGGTTTA CGGGAAGAGT ATGCAAGGAC AAGACTACGG AGGAATCTGC 2700
TGTGCTGTTT TGACTGTGAA TGCAACTGTT GTTTCTGCTG GACTACTACG AGTATTTGGC 2760
CGAGAGGTTG CAGAACTTCC ATTAGTTGCA ACACGCATGT GCAGCCGAGA GAAGGGCTAC 2820
TTTCAATTGC TATTTTCCTG CGTTGAGAAG CTACTCTCAT TCCTGAATGT TGAAAGCATC 2880
ATGGTTCCAG CAGCTGAAGA GGCAGAGCCC TTGTGGATGA ACAAATTTGG CTTCAGAAAA 2940
CTCGCACCTG AACAGCTCAG CAAGTATGTA AAAGTGAGCT ACCAAATGGT GAGGTTCAAA 3000
GGAGCATCCA TGCTGCAGAA ACCGGTTCAT TCGCACCTGA TCACTGACAA GAAAACCGAG 3060
GCGGAACACA ATTTTGATTT GAAACAACCT AAGGAGTCGT TAAAGATGGA TGGAAGAGTG 3120
GATGAGTGA
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0084 Bo4g186380.1 Brassica oleracea 95 0.0 1877
WERAM-Arl-0074 fgenesh2_kg.4__ 1712__ AT2G36720.1 Arabidopsis lyrata 75 0.0 1441
WERAM-Art-0054 AT2G36720.1 Arabidopsis thaliana 74 0.0 1417
WERAM-Thc-0061 EOY08018 Theobroma cacao 45 0.0 842
WERAM-Glm-0111 GLYMA10G07170.3 Glycine max 49 0.0 727
WERAM-Sol-0128 Solyc10g083800.1.1 Solanum lycopersicum 48 0.0 707
WERAM-Pot-0076 POPTR_0006s12180.1 Populus trichocarpa 63 0.0 646
WERAM-Prp-0031 EMJ05208 Prunus persica 63 0.0 645
WERAM-Met-0159 AES81946 Medicago truncatula 59 3e-172 603
WERAM-Sot-0011 PGSC0003DMT400009967 Solanum tuberosum 58 1e-164 578
WERAM-Amt-0092 ERN04758 Amborella trichopoda 56 7e-158 555
WERAM-Tra-0282 Traes_7AL_153E1A74A.2 Triticum aestivum 42 4e-153 540
WERAM-Viv-0039 VIT_06s0061g00840.t01 Vitis vinifera 56 1e-152 538
WERAM-Mua-0153 GSMUA_AchrUn_randomP08820_001 Musa acuminata 53 2e-144 511
WERAM-Orgl-0067 OGLUM06G29720.1 Oryza glumaepatula 50 2e-136 484
WERAM-Brd-0016 BRADI1G29167.1 Brachypodium distachyon 49 2e-135 481
WERAM-Sei-0021 Si005834m Setaria italica 49 1e-134 478
WERAM-Sob-0140 Sb10g031300.1 Sorghum bicolor 49 6e-129 459
WERAM-Orni-0068 ONIVA06G31450.1 Oryza nivara 48 2e-126 451
WERAM-Orb-0069 OBART06G28330.1 Oryza barthii 48 6e-126 449
WERAM-Lep-0068 LPERR06G23780.2 Leersia perrieri 47 1e-125 448
WERAM-Tru-0001 TRIUR3_00440-P1 Triticum urartu 47 2e-121 434
WERAM-Orp-0055 OPUNC06G00070.1 Oryza punctata 47 2e-118 425
WERAM-Orr-0058 ORUFI06G00030.1 Oryza rufipogon 47 2e-118 425
WERAM-Ors-0053 OS06T0101000-01 Oryza sativa 47 2e-118 424
WERAM-Orbr-0067 OB06G10140.1 Oryza brachyantha 47 8e-118 422
WERAM-Hov-0034 MLOC_36594.1 Hordeum vulgare 48 3e-116 417
WERAM-Zem-0076 GRMZM2G134214_P01 Zea mays 46 1e-115 415
WERAM-Orm-0055 OMERI06G00010.1 Oryza meridionalis 46 2e-115 414
WERAM-Org-0067 ORGLA06G0289000.1 Oryza glaberrima 43 5e-112 403
WERAM-Orl-0030 KN538785.1_FGP006 Oryza longistaminata 43 3e-106 384
WERAM-Ori-0069 BGIOSGA022119-PA Oryza indica 47 3e-106 384
WERAM-Php-0109 PP1S50_31V6.1 Physcomitrella patens 41 2e-105 381
WERAM-Sem-0141 EFJ30219 Selaginella moellendorffii 30 9e-54 209
WERAM-Aet-0069 EMT23788 Aegilops tauschii 28 4e-43 174
WERAM-Orn-0112 ENSONIP00000011684.1 Oreochromis niloticus 29 6e-14 77.8
WERAM-Nol-0041 ENSNLEP00000005322.2 Nomascus leucogenys 28 6e-14 77.8
WERAM-Paa-0209 ENSPANP00000002367.1 Papio anubis 28 6e-14 77.8
WERAM-Mam-0174 ENSMMUP00000024592.2 Macaca mulatta 28 6e-14 77.4
WERAM-Hos-0081 ENSP00000349508.2 Homo sapiens 28 6e-14 77.4
WERAM-Poa-0040 ENSPPYP00000004777.1 Pongo abelii 28 6e-14 77.4
WERAM-Gog-0020 ENSGGOP00000001905.2 Gorilla gorilla 28 6e-14 77.4
WERAM-Chs-0125 ENSCSAP00000006661.1 Chlorocebus sabaeus 28 6e-14 77.4
WERAM-Caj-0091 ENSCJAP00000015091.2 Callithrix jacchus 28 7e-14 77.4
WERAM-Xet-0118 ENSXETP00000041129.3 Xenopus tropicalis 27 9e-14 77.0
WERAM-Gaga-0128 ENSGALP00000023294.4 Gallus gallus 29 1e-13 76.6
WERAM-Meg-0141 ENSMGAP00000014906.2 Meleagris gallopavo 29 1e-13 76.6
WERAM-Tag-0164 ENSTGUP00000013727.1 Taeniopygia guttata 29 1e-13 76.6
WERAM-Anp-0127 ENSAPLP00000014113.1 Anas platyrhynchos 29 1e-13 76.6
WERAM-Chh-0003 ENSCHOP00000000249.1 Choloepus hoffmanni 28 1e-13 76.6
WERAM-Pes-0148 ENSPSIP00000017808.1 Pelodiscus sinensis 29 1e-13 76.3
WERAM-Fia-0067 ENSFALP00000004982.1 Ficedula albicollis 29 1e-13 76.3
WERAM-Eqc-0182 ENSECAP00000019928.1 Equus caballus 28 1e-13 76.3
WERAM-Aim-0162 ENSAMEP00000015022.1 Ailuropoda melanoleuca 28 2e-13 76.3
WERAM-Cap-0103 ENSCPOP00000007645.2 Cavia porcellus 28 2e-13 76.3
WERAM-Caf-0156 ENSCAFP00000022067.4 Canis familiaris 28 2e-13 75.9
WERAM-Otg-0102 ENSOGAP00000008965.2 Otolemur garnettii 28 2e-13 75.9
WERAM-Sus-0008 ENSSSCP00000000743.2 Sus scrofa 28 2e-13 75.9
Created Date 25-Jun-2016