WERAM Information

Tag Content
WERAM ID WERAM-Brr-0089
Ensembl Protein ID Bra017181.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra017181 Bra017181.1 Bra017181.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 2.10e-11 44.8 445 581
Organism Brassica rapa
Domain Profile
  Me_Reader PHD
        PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                    ++C +C  d+ +   ++ C +C+++fH+ C+k++  s+peg  wyC sC 
  Bra017181.1-P 445 DMCSIC-GDGGD---LLLCAGCPQAFHTACLKFQ--SMPEG-TWYCSSCS 487
                    58****.44444...8******************..*****.*******7 PP
        PHD.txt   4 ClvCgkddeg.....ekemvqCdeCddwfHlkCvklp....lsslpegkswy.CpsC 50 
                    C++C+ +d+      e++++ Cd+C++ +H+ C+  +    l+++p++ +w+ C+ C
  Bra017181.1-P 526 CVFCRSHDFSigrfdERTVILCDQCEKEYHVGCLRENglcdLKEIPQE-KWFcCNGC 581
                    99**86666655555555*****************9999999****99.88724556 PP
Protein Sequence
(Fasta)		MGEEEEEGAV SLEGAVLKRE RLCVEGEEEE SPNKKQAKEP SNDDIVSEIS NPVSSPVENT 60
SRFHPVKSGS GDFGSEETVS DEERSGNEQF VLEIPKHLSS TGVTRITFKL SKQKKEHAWD 120
EKSPKLPKLP KKKVVASTSY PSNVKKLLAT GMLDGAPVKY ISLPRVRELQ GVIHSGGYLC 180
GCTNCNFSKQ RVLSAYEFEL HAGAKTKHPN NHIFLENGRA VYSIVQELKT APHGVFEDVI 240
RNVAGSALCE EGLQAWKASF EQSNSISDRN RIMEHSSVSY NGQSHDESQN LTPCSLTPYS 300
LENHYYREKT YETDALYEPK RIAKKKVTSH VSGTGCHKKV TEGSNRKRDN DLHRLVFMPN 360
GLPDGTELAY YVKTQKLLAG YKQGNGIVCS CCNKEISPSQ FEAHAGMAGR RQPYRHIFIS 420
SGLSLHDIAL SLANGQVITT GDSDDMCSIC GDGGDLLLCA GCPQAFHTAC LKFQSMPEGT 480
WYCSSCSDGS VSSKKATANG PSGNSKPILI RLSRVVKAPE SEIGGCVFCR SHDFSIGRFD 540
ERTVILCDQC EKEYHVGCLR ENGLCDLKEI PQEKWFCCNG CSRIHTAVQS SVSCGPQTIP 600
GPLSEMIRRK DREKGIITED GDTVEWRILS GKSRYPEHLP LLSRAAVIFR ECFDPIVAKS 660
GRDLIPVMVY GRNISGQEFG GMYCLVLIVN SLVVSAALLR IFGQQVAELP MVATSREYQG 720
RGYFQGLFAC VENLLSSLNV ENLVLPAAEE AESIWTNKFG FTKMTEQQLQ NYQKEVQLTV 780
FKGTSMLEKK VPKSLSESTA LI 802
Nucleotide Sequence
(Fasta)		ATGGGAGAAG AAGAAGAAGA AGGAGCAGTT TCTCTGGAAG GAGCCGTGCT GAAAAGGGAG 60
CGCCTTTGCG TCGAAGGAGA AGAAGAAGAG TCTCCCAACA AGAAACAAGC CAAGGAGCCT 120
TCCAACGACG ACATCGTCTC GGAGATTTCG AACCCCGTCT CTTCTCCCGT CGAAAACACC 180
TCCCGTTTCC ACCCGGTTAA GTCCGGTTCT GGTGACTTTG GGTCCGAGGA GACCGTGAGC 240
GACGAAGAAC GCAGCGGGAA CGAACAGTTT GTGCTGGAGA TTCCGAAGCA TCTTAGCTCC 300
ACGGGAGTCA CGAGGATCAC GTTTAAGTTG AGTAAACAAA AGAAGGAGCA TGCATGGGAT 360
GAGAAGTCTC CGAAGTTACC GAAGTTGCCG AAGAAGAAGG TTGTTGCTTC TACAAGCTAC 420
CCGTCTAATG TGAAGAAGCT TTTGGCGACG GGTATGCTCG ACGGTGCTCC AGTGAAGTAT 480
ATTTCACTCC CGCGAGTGAG AGAGCTTCAG GGAGTGATCC ATTCGGGTGG GTATTTGTGT 540
GGCTGTACCA ATTGCAATTT CTCGAAACAA AGGGTTCTCA GTGCGTATGA GTTTGAGCTG 600
CACGCTGGTG CAAAGACCAA GCATCCTAAT AATCATATAT TTCTGGAGAA TGGAAGGGCG 660
GTGTATAGCA TAGTTCAAGA GCTGAAGACT GCTCCTCACG GTGTTTTCGA GGATGTGATA 720
AGGAATGTGG CTGGTTCTGC TCTGTGTGAG GAGGGCTTAC AAGCTTGGAA AGCAAGTTTC 780
GAACAGAGTA ATAGTATTTC TGACAGGAAC CGTATCATGG AACATTCCTC TGTCAGTTAT 840
AATGGTCAAT CTCATGATGA AAGTCAGAAC CTTACTCCAT GCTCTCTTAC TCCATACTCG 900
CTGGAAAATC ATTATTATCG AGAGAAAACA TATGAAACAG ACGCATTATA TGAGCCGAAG 960
CGGATAGCAA AGAAGAAGGT TACTTCTCAT GTATCTGGTA CGGGTTGCCA TAAGAAAGTT 1020
ACTGAAGGAA GCAATAGAAA AAGGGACAAT GATTTACATC GGTTGGTGTT TATGCCCAAT 1080
GGGTTGCCGG ACGGGACTGA ATTGGCCTAC TATGTGAAAA CGCAGAAACT TCTAGCGGGT 1140
TACAAGCAAG GAAATGGTAT AGTATGTAGC TGCTGCAATA AAGAGATTAG TCCTTCGCAA 1200
TTCGAAGCAC ATGCTGGAAT GGCTGGTAGA CGACAACCCT ATCGTCATAT CTTTATCTCT 1260
TCCGGATTGT CTTTGCACGA TATAGCCTTA TCGTTGGCAA ATGGACAAGT CATCACAACC 1320
GGTGACAGTG ATGACATGTG TTCTATATGT GGGGATGGTG GAGATTTACT GCTTTGTGCT 1380
GGATGCCCTC AAGCATTCCA TACAGCTTGT TTAAAATTCC AGTCTATGCC TGAAGGTACA 1440
TGGTACTGTT CGAGCTGCAG TGATGGATCT GTATCTAGTA AAAAGGCTAC TGCTAATGGT 1500
CCTTCTGGCA ACTCTAAGCC TATACTCATA AGACTGTCTA GAGTCGTTAA AGCTCCAGAA 1560
AGCGAAATTG GAGGCTGCGT GTTCTGCAGG TCCCATGATT TTAGCATCGG AAGATTTGAT 1620
GAAAGGACTG TTATTCTATG TGACCAGTGT GAGAAAGAGT ACCATGTTGG TTGTCTTCGA 1680
GAGAATGGGC TCTGTGATTT AAAAGAAATA CCGCAAGAGA AATGGTTCTG CTGTAACGGC 1740
TGCAGCAGGA TTCACACGGC AGTTCAGAGT TCTGTGTCAT GTGGGCCACA AACTATTCCT 1800
GGACCTCTGT CAGAAATGAT ACGCAGAAAA GACAGAGAAA AAGGAATAAT TACAGAGGAT 1860
GGGGATACAG TCGAATGGAG GATACTTAGT GGAAAAAGTC GATACCCAGA GCATCTGCCT 1920
TTACTTTCAC GAGCGGCTGT TATCTTCAGG GAATGTTTTG ATCCCATTGT TGCGAAGTCT 1980
GGTCGTGATC TCATTCCTGT CATGGTGTAT GGGAGAAATA TATCAGGTCA GGAGTTTGGA 2040
GGAATGTACT GTTTGGTCCT GATTGTAAAT TCTCTTGTTG TGTCTGCTGC GCTGCTGAGA 2100
ATTTTTGGTC AGCAAGTTGC TGAACTTCCT ATGGTAGCCA CAAGCAGAGA GTACCAAGGA 2160
AGGGGCTACT TCCAAGGGCT GTTTGCTTGT GTGGAGAATC TTCTTTCTTC TCTAAATGTT 2220
GAGAACCTGG TCCTTCCAGC AGCTGAAGAA GCCGAGTCTA TATGGACAAA TAAGTTTGGC 2280
TTTACAAAGA TGACTGAGCA GCAATTGCAG AATTACCAAA AGGAAGTGCA GCTTACAGTC 2340
TTCAAAGGAA CCTCAATGCT GGAGAAGAAA GTACCAAAGA GTCTATCAGA ATCAACAGCT 2400
CTCATCTGA
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0085 Bo4g187000.1 Brassica oleracea 91 0.0 1394
WERAM-Art-0055 AT2G37520.1 Arabidopsis thaliana 79 0.0 1212
WERAM-Arl-0075 fgenesh2_kg.4__ 1807__ AT2G37520.1 Arabidopsis lyrata 76 0.0 1182
WERAM-Thc-0060 EOY07594 Theobroma cacao 60 0.0 867
WERAM-Viv-0057 VIT_08s0040g03340.t01 Vitis vinifera 62 0.0 810
WERAM-Glm-0110 GLYMA10G05080.2 Glycine max 64 0.0 808
WERAM-Sol-0129 Solyc10g084650.1.1 Solanum lycopersicum 54 0.0 806
WERAM-Met-0020 KEH42376 Medicago truncatula 62 0.0 775
WERAM-Prp-0028 EMJ08419 Prunus persica 60 0.0 766
WERAM-Sot-0034 PGSC0003DMT400028730 Solanum tuberosum 65 2e-171 600
WERAM-Mua-0153 GSMUA_AchrUn_randomP08820_001 Musa acuminata 46 4e-151 533
WERAM-Pot-0098 POPTR_0009s00930.1 Populus trichocarpa 44 7e-136 482
WERAM-Orgl-0067 OGLUM06G29720.1 Oryza glumaepatula 43 6e-135 479
WERAM-Sei-0021 Si005834m Setaria italica 43 2e-133 474
WERAM-Amt-0092 ERN04758 Amborella trichopoda 54 3e-131 466
WERAM-Lep-0068 LPERR06G23780.2 Leersia perrieri 42 7e-129 459
WERAM-Orni-0068 ONIVA06G31450.1 Oryza nivara 42 4e-126 449
WERAM-Orb-0069 OBART06G28330.1 Oryza barthii 42 5e-126 449
WERAM-Zem-0076 GRMZM2G134214_P01 Zea mays 40 1e-123 441
WERAM-Tra-0282 Traes_7AL_153E1A74A.2 Triticum aestivum 40 6e-121 432
WERAM-Orr-0058 ORUFI06G00030.1 Oryza rufipogon 40 1e-120 431
WERAM-Ors-0053 OS06T0101000-01 Oryza sativa 40 1e-120 431
WERAM-Orbr-0067 OB06G10140.1 Oryza brachyantha 39 8e-120 429
WERAM-Hov-0034 MLOC_36594.1 Hordeum vulgare 39 2e-118 424
WERAM-Orm-0055 OMERI06G00010.1 Oryza meridionalis 39 3e-118 423
WERAM-Orp-0055 OPUNC06G00070.1 Oryza punctata 39 6e-118 422
WERAM-Brd-0016 BRADI1G29167.1 Brachypodium distachyon 46 4e-114 410
WERAM-Php-0096 PP1S412_30V6.1 Physcomitrella patens 37 3e-109 393
WERAM-Org-0067 ORGLA06G0289000.1 Oryza glaberrima 39 8e-109 392
WERAM-Sob-0140 Sb10g031300.1 Sorghum bicolor 38 2e-107 387
WERAM-Tru-0100 TRIUR3_34738-P1 Triticum urartu 37 7e-106 382
WERAM-Orl-0030 KN538785.1_FGP006 Oryza longistaminata 39 7e-106 382
WERAM-Ori-0069 BGIOSGA022119-PA Oryza indica 44 5e-84 310
WERAM-Sem-0141 EFJ30219 Selaginella moellendorffii 31 1e-38 159
WERAM-Aet-0069 EMT23788 Aegilops tauschii 31 2e-36 151
Created Date 25-Jun-2016