WERAM Information

Tag Content
WERAM ID WERAM-Brr-0005
Ensembl Protein ID Bra000936.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra000936 Bra000936.1 Bra000936.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM2 1.50e-66 225.1 502 888
Organism Brassica rapa
Domain Profile
  HDM JHDM2
      JHDM2.txt   6 dgklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvy...vgilkkkwaeedlkellksieee..eldevtrkrvqdp 96 
                     g lNLa++lp+ +++pdlgPk+y AyG+ +e d ++++t+lh+d+sdavn+l++   v+i+  +++  ++++l k++  +  e+ e  +k v+++
  Bra000936.1-P 502 SGLLNLATRLPEESLKPDLGPKTYIAYGFPEELDGGDSVTKLHCDMSDAVNVLTHtakVNIPSWQHKLVKKAKLRKQLSGQetEASECENKSVKEV 597
                    588****************************************************99999999999999999999998766447889999999999 PP
      JHDM2.txt  97 kekpgal 103
                    +++++al
  Bra000936.1-P 598 ENEEAAL 604
                    9999887 PP
      JHDM2.txt  90 rkrvqdpkekpgalWhifaakdaekirellekvskeqga....evppdhdpihdqswyldrklrkrLfeeyGvegwtlvQklgdavlipagapHqv 181
                    +++  +  ++ galW+if+++d++k+ e+le++++e+++    +v+++ +pihdq+++l+++++k+L+ee+ +e+wt+vQ lg+av+ipag+pHqv
  Bra000936.1-P 763 NANESSEGVHGGALWDIFRREDVPKLIEYLERHKHEFRHffnePVESVTHPIHDQTLFLTESQKKQLKEEFDIEPWTFVQHLGEAVFIPAGCPHQV 858
                    33344556788***************************9999888999************************************************ PP
      JHDM2.txt 182 qnlkscvkvaedFvsPEnvkecfrltkeyr 211
                    +n++sc+kva dFv PE ++ec+rlt+e+r
  Bra000936.1-P 859 RNIQSCIKVALDFVAPESLEECLRLTQEFR 888
                    ****************************98 PP
Protein Sequence
(Fasta)		MEKRIRSDDS DESEELRSDK RRNTRKKDTV GVSIGSPSSE GTGRGRGRGR GRGRGRGRGR 60
NSDGADDSKR IRSDDSNDSD RLKEHRSEGV VSIESPSSQG QGRGRRRARG RKSDGGEGSR 120
RTAERRGRER DDNSDGTKKY AGLTCHQCKN LTDKVDLVFC SKCIKKRYCY DCIKRWYPER 180
TPEEVRDACP FCVGTCNCRA CLRQPLLVKR TSEKDASVKL KQLQYLLVKA LPVLRDIYAE 240
QIRELEVESA IRGVPVTESD ITWSELHPSE RIYCDLCSTS IANFHRSCLN PDCSSDICLS 300
CCKELRESSH DEKVDGENFS DWKLSPDGSI PCPPKERGGC GTSTLELRRL CECDRVEKLI 360
TNAEEVTLQF RPPDVNIAHE CSSCTENSDS IISRQAAFRK NGHDNFLYCP NAVDLAEGDI 420
AHFQSHWMRA EPVIVRNVLD KTPGLSWDPM VMWRACREMD PKAKCKEEAK SVKALDCLDW 480
CEVEINIHQF FQGYLKGRQD PSGLLNLATR LPEESLKPDL GPKTYIAYGF PEELDGGDSV 540
TKLHCDMSDA VNVLTHTAKV NIPSWQHKLV KKAKLRKQLS GQETEASECE NKSVKEVENE 600
EAALKKCDGL VGEETLKDKA ANEDDKMFVS KGKCTKTERD DPVEGSCSSK SGHDPKADAG 660
LINEPIAGEN NSEVCLKTER LSPTNQSEDD PTVENGLKMP TALSTAPWDT DGSLPPPMES 720
IKEEKLDSPK ETEGNVTQSL DGSTSAETIQ EQKHDAPKET NGNANESSEG VHGGALWDIF 780
RREDVPKLIE YLERHKHEFR HFFNEPVESV THPIHDQTLF LTESQKKQLK EEFDIEPWTF 840
VQHLGEAVFI PAGCPHQVRN IQSCIKVALD FVAPESLEEC LRLTQEFRRL PKDHRSNEDK 900
LELKKIVLHA ASSAIREAQD LMQNSMTE 928
Nucleotide Sequence
(Fasta)		ATGGAGAAGC GAATTAGATC AGATGATTCC GACGAGTCAG AAGAACTTCG ATCTGACAAG 60
CGACGTAATA CGAGGAAGAA AGATACGGTT GGTGTGAGCA TAGGCTCTCC GAGCTCTGAG 120
GGAACAGGTA GAGGTAGAGG TAGAGGAAGG GGAAGAGGAA GAGGGAGAGG GAGAGGAAGA 180
AACTCTGACG GTGCAGATGA TTCGAAGAGA ATTCGATCAG ATGATTCCAA CGACTCAGAT 240
AGGCTCAAAG AACATAGATC TGAAGGAGTT GTGAGCATTG AATCTCCGAG CTCGCAGGGC 300
CAGGGGAGAG GGAGACGGAG AGCGAGAGGA AGAAAATCTG ACGGTGGAGA GGGCTCGAGG 360
CGAACTGCTG AAAGAAGAGG AAGAGAGAGA GATGATAACT CTGATGGAAC AAAAAAGTAT 420
GCGGGTTTGA CTTGTCATCA GTGCAAGAAC CTAACGGATA AGGTTGATCT CGTCTTCTGT 480
TCTAAATGCA TCAAGAAGCG CTATTGCTAT GACTGCATCA AGAGATGGTA TCCAGAGAGA 540
ACGCCTGAGG AAGTTAGAGA TGCATGTCCG TTCTGTGTCG GGACTTGCAA CTGCAGAGCT 600
TGTTTGCGTC AGCCTTTGCT TGTCAAGCGA ACAAGTGAGA AGGACGCGAG TGTCAAGCTG 660
AAGCAGTTGC AATACCTATT AGTTAAAGCT CTTCCTGTTC TTAGAGATAT TTATGCAGAG 720
CAGATCCGTG AACTGGAGGT TGAATCAGCA ATTAGAGGAG TCCCTGTGAC AGAATCTGAT 780
ATTACGTGGT CCGAACTTCA TCCTAGTGAA CGCATATACT GTGACCTGTG CAGCACATCC 840
ATTGCCAATT TTCACAGAAG CTGTCTGAAC CCAGATTGCT CTTCCGACAT TTGTCTTTCT 900
TGCTGCAAGG AACTTAGAGA GAGTTCACAT GATGAGAAGG TAGATGGGGA GAACTTCTCT 960
GACTGGAAGC TTAGTCCTGA CGGTAGCATT CCATGCCCTC CCAAAGAGCG TGGTGGCTGT 1020
GGCACTTCAA CACTGGAGTT GAGACGTTTG TGCGAATGTG ATAGGGTTGA AAAGCTGATA 1080
ACGAATGCAG AGGAAGTTAC TCTGCAGTTT AGGCCACCAG ATGTGAATAT TGCTCATGAA 1140
TGTTCCTCAT GTACTGAAAA CTCTGATTCC ATCATCAGTA GGCAGGCGGC GTTTAGGAAG 1200
AATGGTCATG ATAACTTTTT GTACTGCCCA AATGCTGTTG ATCTGGCTGA AGGCGATATT 1260
GCTCATTTTC AGTCGCACTG GATGAGGGCG GAACCTGTGA TAGTCAGAAA TGTTCTCGAC 1320
AAGACACCTG GACTAAGTTG GGATCCAATG GTTATGTGGA GGGCTTGCAG GGAAATGGAT 1380
CCAAAAGCTA AATGCAAAGA AGAGGCAAAA AGCGTGAAAG CTTTGGATTG CTTGGATTGG 1440
TGTGAGGTTG AAATAAATAT TCATCAGTTT TTTCAAGGCT ACTTGAAAGG CCGCCAGGAT 1500
CCCAGTGGTC TCTTGAATCT GGCAACAAGA CTTCCTGAAG AATCCTTGAA ACCAGATCTT 1560
GGACCTAAGA CATACATTGC CTACGGTTTC CCTGAAGAGC TTGATGGAGG AGATTCTGTG 1620
ACAAAACTAC ATTGTGATAT GTCCGACGCG GTCAATGTGC TGACACACAC AGCTAAAGTT 1680
AATATACCTT CCTGGCAACA CAAACTTGTA AAAAAAGCAA AGTTGCGTAA ACAACTGTCT 1740
GGTCAAGAGA CAGAAGCCAG TGAATGTGAA AACAAGTCAG TGAAAGAAGT AGAGAATGAG 1800
GAAGCTGCTT TAAAGAAATG TGATGGTCTT GTGGGAGAAG AGACTTTAAA GGACAAGGCA 1860
GCTAACGAAG ATGATAAGAT GTTTGTTTCA AAAGGCAAAT GTACCAAAAC TGAAAGAGAT 1920
GATCCTGTGG AAGGGTCTTG TAGTTCGAAG TCAGGTCATG ATCCAAAGGC GGATGCTGGT 1980
TTGATAAACG AACCAATTGC TGGTGAGAAT AATAGTGAAG TATGTTTGAA GACAGAGAGA 2040
TTATCTCCAA CCAACCAAAG TGAAGATGAT CCCACGGTGG AGAACGGACT AAAGATGCCA 2100
ACAGCTCTTT CAACTGCCCC GTGGGACACA GATGGTAGTC TCCCGCCGCC TATGGAATCC 2160
ATAAAAGAGG AGAAACTGGA TTCTCCAAAG GAAACTGAGG GCAATGTCAC CCAGAGTTTG 2220
GATGGTAGTA CAAGTGCGGA GACTATACAA GAGCAGAAAC ATGATGCTCC AAAAGAAACT 2280
AATGGCAATG CCAATGAGAG TTCAGAGGGT GTGCATGGTG GTGCTTTGTG GGACATCTTC 2340
CGAAGAGAGG ATGTTCCAAA ACTCATTGAG TATTTGGAAA GACACAAGCA TGAGTTTCGT 2400
CATTTCTTTA ACGAACCTGT GGAATCTGTT ACTCACCCAA TTCATGACCA GACATTGTTC 2460
TTGACTGAAA GCCAGAAGAA ACAGCTGAAA GAGGAGTTCG ATATAGAGCC ATGGACATTT 2520
GTGCAACACC TGGGTGAAGC TGTTTTTATC CCTGCAGGTT GTCCGCACCA AGTGAGAAAT 2580
ATACAGTCAT GCATAAAGGT GGCACTTGAT TTTGTTGCTC CTGAAAGCTT AGAGGAGTGC 2640
CTTAGGCTAA CACAGGAATT TCGGAGACTA CCAAAAGACC ACAGATCCAA TGAAGACAAA 2700
CTAGAGCTTA AGAAAATAGT GCTGCATGCT GCCAGCTCAG CCATAAGAGA GGCACAAGAT 2760
CTAATGCAAA ACTCCATGAC AGAATGA 2788
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0050 Bo3g054370.1 Brassica oleracea 87 0.0 1513
WERAM-Art-0095 AT4G00990.1 Arabidopsis thaliana 59 0.0 890
WERAM-Viv-0094 VIT_15s0046g00340.t01 Vitis vinifera 48 0.0 749
WERAM-Arl-0098 fgenesh2_kg.6__ 3604__ AT4G00990.1 Arabidopsis lyrata 62 2e-179 627
WERAM-Prp-0116 EMJ12151 Prunus persica 40 7e-162 568
WERAM-Mua-0068 GSMUA_Achr4P05350_001 Musa acuminata 41 3e-161 566
WERAM-Tra-0279 Traes_6DS_BF9884650.1 Triticum aestivum 38 2e-152 537
WERAM-Zem-0041 GRMZM2G054162_P01 Zea mays 38 9e-151 531
WERAM-Thc-0089 EOY14240 Theobroma cacao 38 2e-150 530
WERAM-Orgl-0017 OGLUM02G00660.1 Oryza glumaepatula 39 8e-149 525
WERAM-Orr-0016 ORUFI02G00790.1 Oryza rufipogon 39 8e-149 525
WERAM-Orni-0087 ONIVA08G02050.1 Oryza nivara 39 8e-149 525
WERAM-Orm-0018 OMERI02G00250.1 Oryza meridionalis 39 8e-149 525
WERAM-Ori-0020 BGIOSGA007275-PA Oryza indica 39 8e-149 525
WERAM-Orb-0016 OBART02G00740.1 Oryza barthii 39 8e-149 525
WERAM-Orbr-0020 OB02G10630.1 Oryza brachyantha 37 2e-147 520
WERAM-Aet-0029 EMT12717 Aegilops tauschii 37 2e-144 510
WERAM-Org-0016 ORGLA02G0006900.1 Oryza glaberrima 38 7e-144 509
WERAM-Met-0165 KEH24644 Medicago truncatula 51 1e-137 488
WERAM-Lep-0019 LPERR02G00580.1 Leersia perrieri 37 8e-135 479
WERAM-Pot-0147 POPTR_0015s01510.1 Populus trichocarpa 50 7e-131 466
WERAM-Glm-0182 GLYMA14G26015.1 Glycine max 47 9e-128 455
WERAM-Tru-0016 TRIUR3_07101-P1 Triticum urartu 41 6e-125 446
WERAM-Amt-0026 ERN14091 Amborella trichopoda 46 3e-120 430
WERAM-Sol-0046 Solyc03g083240.2.1 Solanum lycopersicum 45 2e-114 411
WERAM-Sot-0039 PGSC0003DMT400035505 Solanum tuberosum 42 1e-97 355
WERAM-Hov-0005 MLOC_11348.2 Hordeum vulgare 38 7e-96 349
WERAM-Sob-0006 Sb01g015210.1 Sorghum bicolor 39 2e-95 347
WERAM-Brd-0103 BRADI4G27417.1 Brachypodium distachyon 39 3e-95 347
WERAM-Sei-0128 Si034182m Setaria italica 38 1e-94 345
WERAM-Ors-0026 OS02T0828900-01 Oryza sativa 39 2e-93 341
WERAM-Orl-0076 KN539615.1_FGP001 Oryza longistaminata 38 4e-93 340
WERAM-Orp-0036 OPUNC03G20970.1 Oryza punctata 38 4e-88 323
WERAM-Php-0022 PP1S144_17V6.1 Physcomitrella patens 39 5e-88 323
WERAM-Tub-0003 ENSTBEP00000000295.1 Tupaia belangeri 49 1e-33 142
WERAM-Ere-0095 ENSEEUP00000009792.1 Erinaceus europaeus 49 2e-33 142
WERAM-Bot-0099 ENSBTAP00000013278.4 Bos taurus 49 2e-33 142
WERAM-Orc-0080 ENSOCUP00000007280.2 Oryctolagus cuniculus 49 2e-33 142
WERAM-Aim-0189 ENSAMEP00000017468.1 Ailuropoda melanoleuca 49 2e-33 142
WERAM-Sus-0108 ENSSSCP00000015245.2 Sus scrofa 49 2e-33 142
WERAM-Myl-0184 ENSMLUP00000015336.2 Myotis lucifugus 49 2e-33 142
WERAM-Mup-0101 ENSMPUP00000009333.1 Mustela putorius furo 49 2e-33 142
WERAM-Ten-0123 ENSTNIP00000013426.1 Tetraodon nigroviridis 48 2e-33 142
WERAM-Fec-0021 ENSFCAP00000001589.3 Felis catus 49 2e-33 142
WERAM-Dan-0091 ENSDNOP00000009144.3 Dasypus novemcinctus 49 2e-33 142
WERAM-Gog-0012 ENSGGOP00000000822.2 Gorilla gorilla 49 2e-33 142
WERAM-Caf-0016 ENSCAFP00000001774.3 Canis familiaris 49 2e-33 142
WERAM-Pat-0141 ENSPTRP00000029560.2 Pan troglodytes 49 2e-33 142
WERAM-Poa-0141 ENSPPYP00000017696.1 Pongo abelii 49 2e-33 142
WERAM-Cap-0028 ENSCPOP00000002138.2 Cavia porcellus 49 2e-33 142
WERAM-Ova-0174 ENSOARP00000017606.1 Ovis aries 49 2e-33 141
WERAM-Loa-0020 ENSLAFP00000001269.3 Loxodonta africana 49 2e-33 141
WERAM-Otg-0093 ENSOGAP00000008081.2 Otolemur garnettii 49 2e-33 141
WERAM-Mim-0018 ENSMICP00000001555.1 Microcebus murinus 49 2e-33 141
WERAM-Hos-0102 ENSP00000326563.5 Homo sapiens 49 3e-33 141
WERAM-Eqc-0143 ENSECAP00000015928.1 Equus caballus 49 3e-33 141
WERAM-Soa-0091 ENSSARP00000008521.1 Sorex araneus 49 3e-33 141
WERAM-Mam-0003 ENSMMUP00000000618.2 Macaca mulatta 49 3e-33 141
WERAM-Chs-0157 ENSCSAP00000009298.1 Chlorocebus sabaeus 49 3e-33 141
WERAM-Tar-0009 ENSTRUP00000002076.1 Takifugu rubripes 48 3e-33 141
WERAM-Nol-0092 ENSNLEP00000010895.1 Nomascus leucogenys 49 3e-33 141
WERAM-Ptv-0087 ENSPVAP00000007885.1 Pteropus vampyrus 49 3e-33 141
WERAM-Anc-0075 ENSACAP00000007027.2 Anolis carolinensis 49 3e-33 141
WERAM-Sah-0129 ENSSHAP00000013821.1 Sarcophilus harrisii 49 3e-33 141
WERAM-Mod-0100 ENSMODP00000015209.4 Monodelphis domestica 49 3e-33 141
WERAM-Caj-0074 ENSCJAP00000012191.1 Callithrix jacchus 42 4e-33 140
WERAM-Paa-0043 ENSPANP00000002578.1 Papio anubis 49 5e-33 140
WERAM-Mae-0023 ENSMEUP00000001666.1 Macropus eugenii 49 5e-33 140
WERAM-Fia-0049 ENSFALP00000003539.1 Ficedula albicollis 49 6e-33 140
WERAM-Orn-0157 ENSONIP00000016309.1 Oreochromis niloticus 49 6e-33 140
WERAM-Gaga-0080 ENSGALP00000012399.4 Gallus gallus 49 6e-33 140
WERAM-Meg-0102 ENSMGAP00000010078.1 Meleagris gallopavo 49 7e-33 140
WERAM-Anp-0111 ENSAPLP00000012780.1 Anas platyrhynchos 49 7e-33 140
WERAM-Tag-0001 ENSTGUP00000000018.1 Taeniopygia guttata 49 8e-33 140
WERAM-Xim-0102 ENSXMAP00000009010.1 Xiphophorus maculatus 49 9e-33 140
WERAM-Mum-0157 ENSMUSP00000037628.7 Mus musculus 49 9e-33 139
WERAM-Ran-0218 ENSRNOP00000067649.2 Rattus norvegicus 49 1e-32 139
Created Date 25-Jun-2016