WERAM Information

Tag Content
WERAM ID WERAM-Bro-0174
Ensembl Protein ID Bo9g038630.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo9g038630 Bo9g038630.1 Bo9g038630.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM2 2.80e-72 244.3 693 928
Organism Brassica oleracea
Domain Profile
  HDM JHDM2
     JHDM2.txt   4 krdgklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvy.............vgilkkkwaeedlkellksieee.... 83 
                   +r+g lN+a klp+ +++pdlgPk+y AyG+  e +r++++t+lh+d+sdavnil++             v  lk+k+ e+++ e + + +++    
  Bo9g038630.1 693 PRTGILNIAAKLPEGLIKPDLGPKTYIAYGIPDELGRGDSVTKLHCDMSDAVNILTHttevtlsqeqisaVKDLKQKHREQNKLEEQGTEDDGiacg 789
                   47899**************************************************************888666666665555444443434337777 PP
     JHDM2.txt  84 .........eldevtrkrvqdpkekpgalWhifaakdaekirellekvskeqga....evppdhdpihdqswyldrklrkrLfeeyGvegwtlvQkl 167
                            e+  ++ ++ q+ +e+ +alW+if+++d++k++e+l+k++ke+++    +v ++++pihdqs+yl+ +++++L+ e+G+e+wt+vQkl
  Bo9g038630.1 790 reeegmnmpEI--LSYEKQQNHDETGSALWDIFRREDVPKLEEYLRKHCKEFRHtfccPVTKVYHPIHDQSCYLTVEHKRKLKAEFGIEPWTFVQKL 884
                   77777754444..3556667778888***************************999999999*********************************** PP
     JHDM2.txt 168 gdavlipagapHqvqnlkscvkvaedFvsPEnvkecfrltkeyr 211
                   g+av+ipag+pHqv+nlksc kva dFvsPEn++ec+rlt+e+r
  Bo9g038630.1 885 GEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENIHECLRLTEEFR 928
                   ******************************************98 PP
Protein Sequence
(Fasta)		MVESDDGVDF KAYSPIESSL FSFQCIWSTK KKRSLKLVKS KEFSRKEERE GGMRPRPVIF 60
RVYSRKRKRL SRVGSVEGSD GVEVILKEAP SHEKLQHSVD DHDGVVLGDW IKQKRRFRVK 120
SGEDKRIDSE VKTVSVTKVE PLEDDTILPS WSPGRFTGKR KNRRRVGLDV MKVEPCEDHG 180
RSTGRKRDRH QTELEEDVAW EEELQMISKI QATKRRRRGS HTPEHVTRAS GSRSRSPDSE 240
VSDSLLKNGC SDDPESMKSS SKESKERIAI CHQCLKGERI TLLVCSECEE TMYCLQCIRK 300
WYPHLSEDDI VDKCPFCHKN CNCNRCLHLN GLIETTKRDL ANSERRHHLQ YLIALMLPFL 360
NMLSESQNQE IETEAKAQGL QPFEVDVTSA VSYCDERVYC DHCATSIVDL HRSCPKCSFE 420
LCLNCCQEIR EGSMSQRPET KLQYVNKGYK YMHGLEMEPS SSSVSEEDVE ANTFAKWNAS 480
SDGSIPCAPK ELGGCGDCML ELKRILPQNR ISDLEQKAEA FLASYDNSPR VSKCKCSALE 540
TDMTRKTASR NGSSDNYLFC PRSLDVLKEE GLLHFQEHWK KGEPVIVGNA LDNTHGLSWE 600
PMVMWRALCE NLDSTASSKM SEVKAIDCLA NCEVEINTRH FFEGYSKGRT YGNFWPEMLK 660
LKDWPPSDKF EDLLPRHCDE FISALPFQEY SDPRTGILNI AAKLPEGLIK PDLGPKTYIA 720
YGIPDELGRG DSVTKLHCDM SDAVNILTHT TEVTLSQEQI SAVKDLKQKH REQNKLEEQG 780
TEDDGIACGR EEEGMNMPEI LSYEKQQNHD ETGSALWDIF RREDVPKLEE YLRKHCKEFR 840
HTFCCPVTKV YHPIHDQSCY LTVEHKRKLK AEFGIEPWTF VQKLGEAVFI PAGCPHQVRN 900
LKSCTKVAVD FVSPENIHEC LRLTEEFRQL PKNHKAREDK LEIKKMVIYA IEQTLKEFEM 960
LSEEVKPMLQ
Nucleotide Sequence
(Fasta)		ATGGTGGAGT CCGATGATGG AGTTGATTTC AAGGCTTATA GTCCGATTGA GAGTTCTCTG 60
TTTTCCTTTC AATGTATTTG GTCTACGAAG AAGAAGAGAA GTTTGAAATT AGTCAAGTCC 120
AAAGAGTTTA GCAGGAAAGA GGAGAGAGAG GGAGGCATGA GGCCGCGTCC TGTGATATTC 180
AGAGTCTATA GTAGGAAAAG GAAGCGGCTT TCGCGTGTGG GTAGTGTTGA AGGCAGTGAC 240
GGAGTTGAAG TTATTCTTAA AGAAGCACCA TCTCATGAGA AACTGCAACA CTCTGTAGAT 300
GATCATGATG GTGTTGTATT AGGTGATTGG ATTAAACAAA AGAGGAGGTT CAGGGTGAAG 360
AGTGGGGAAG ATAAGCGCAT AGACTCCGAG GTGAAGACTG TGTCTGTAAC GAAAGTGGAA 420
CCTTTAGAAG ATGATACAAT ATTGCCTAGT TGGAGTCCTG GAAGATTCAC GGGTAAAAGG 480
AAGAACAGAC GCAGAGTAGG ACTTGATGTT ATGAAAGTGG AACCTTGTGA AGATCATGGA 540
AGATCCACTG GTAGAAAGAG AGACAGACAC CAAACAGAAC TTGAAGAAGA TGTGGCTTGG 600
GAAGAAGAAC TTCAAATGAT TTCTAAGATC CAGGCAACAA AGCGAAGAAG AAGAGGTTCC 660
CACACTCCAG AGCATGTCAC ACGTGCTAGT GGATCACGTT CACGTTCGCC AGATTCAGAG 720
GTGTCAGATT CCCTTTTGAA AAATGGGTGT TCTGATGACC CTGAAAGCAT GAAAAGTTCT 780
TCAAAGGAAT CTAAGGAACG CATTGCCATT TGCCATCAGT GTTTAAAAGG GGAAAGGATA 840
ACACTTCTCG TTTGCAGTGA ATGTGAAGAG ACTATGTATT GTCTTCAATG TATAAGGAAA 900
TGGTATCCAC ATCTATCTGA GGATGATATC GTTGATAAAT GTCCTTTTTG CCACAAAAAT 960
TGTAATTGCA ACAGATGCTT ACATTTGAAT GGTTTAATCG AGACAACGAA GAGGGACCTC 1020
GCGAATTCTG AAAGACGCCA TCATCTCCAA TACTTAATTG CTTTGATGCT TCCATTTTTG 1080
AATATGTTAT CCGAGTCCCA GAATCAAGAG ATTGAAACTG AGGCAAAGGC TCAAGGATTA 1140
CAGCCTTTTG AAGTTGACGT AACTAGCGCA GTGAGCTACT GTGATGAACG TGTATACTGT 1200
GATCATTGTG CAACTTCAAT TGTTGACTTG CACCGGAGCT GCCCAAAGTG CTCTTTCGAG 1260
CTTTGTTTGA ACTGTTGTCA AGAGATTCGC GAAGGTTCTA TGTCCCAACG CCCTGAAACG 1320
AAGCTGCAGT ATGTTAATAA AGGATACAAG TACATGCATG GTTTAGAAAT GGAACCGAGC 1380
TCCTCTTCTG TTTCCGAGGA GGATGTAGAA GCTAACACAT TCGCAAAGTG GAATGCTAGT 1440
TCCGATGGAA GCATCCCTTG TGCACCAAAA GAGCTAGGTG GTTGTGGTGA TTGTATGTTG 1500
GAGCTTAAGC GAATCCTACC ACAGAACCGG ATCTCAGACT TGGAACAAAA GGCAGAGGCT 1560
TTCTTGGCAT CATACGATAA CAGCCCTCGA GTGTCGAAAT GTAAATGTTC TGCCTTGGAG 1620
ACAGATATGA CAAGGAAAAC AGCTTCTAGG AATGGATCAA GCGACAACTA CTTGTTCTGT 1680
CCACGATCTC TTGATGTTTT GAAGGAAGAA GGGCTTCTGC ATTTTCAAGA GCATTGGAAA 1740
AAGGGTGAAC CGGTAATCGT TGGGAACGCT CTTGATAACA CACATGGTTT AAGCTGGGAG 1800
CCGATGGTTA TGTGGAGGGC GTTATGCGAA AATTTGGATT CAACAGCAAG TTCTAAGATG 1860
TCTGAAGTGA AAGCTATTGA TTGTTTAGCT AATTGTGAGG TGGAGATCAA TACTCGTCAT 1920
TTCTTTGAAG GTTATAGCAA AGGAAGAACC TATGGAAACT TCTGGCCTGA GATGTTAAAG 1980
CTAAAGGACT GGCCTCCTTC TGATAAGTTT GAAGATCTTT TACCTCGTCA CTGTGACGAG 2040
TTCATATCCG CATTGCCTTT TCAAGAATAT AGCGATCCTA GAACCGGGAT TCTGAACATT 2100
GCAGCAAAGC TTCCTGAAGG ACTTATCAAA CCAGATTTGG GTCCGAAAAC GTACATTGCC 2160
TACGGGATTC CAGATGAGCT TGGTAGAGGT GACTCCGTGA CTAAGCTTCA CTGCGATATG 2220
TCAGACGCGG TTAATATTCT GACGCATACA ACTGAGGTAA CATTAAGTCA AGAACAGATA 2280
TCTGCAGTCA AAGACCTGAA GCAGAAACAC AGAGAACAGA ACAAGCTAGA GGAACAGGGC 2340
ACCGAAGACG ATGGCATTGC CTGCGGCCGT GAGGAAGAAG GAATGAACAT GCCAGAGATT 2400
CTGAGCTATG AAAAACAGCA GAATCATGAC GAAACAGGAA GTGCTCTTTG GGACATTTTT 2460
AGGAGAGAAG ATGTTCCAAA GTTAGAAGAG TATCTAAGAA AGCATTGCAA AGAATTTAGA 2520
CACACTTTTT GTTGTCCGGT TACAAAGGTT TATCACCCGA TACACGACCA GTCATGCTAT 2580
CTAACCGTAG AGCATAAAAG AAAACTCAAG GCGGAGTTTG GGATCGAACC ATGGACATTT 2640
GTGCAAAAGC TAGGAGAAGC TGTGTTTATT CCTGCGGGTT GCCCTCATCA AGTCCGTAAT 2700
CTAAAGTCGT GCACTAAAGT TGCAGTTGAC TTTGTGTCAC CAGAGAACAT CCATGAGTGT 2760
CTACGTCTTA CCGAAGAGTT TCGTCAACTT CCCAAGAACC ACAAGGCCAG AGAGGACAAA 2820
CTTGAGATAA AGAAGATGGT GATCTATGCG ATCGAGCAAA CTCTCAAAGA ATTTGAAATG 2880
TTATCGGAAG AGGTCAAACC AATGCTCCAA TAG 2914
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brr-0135 Bra027055.1-P Brassica rapa 90 0.0 1639
WERAM-Arl-0004 Al_scaffold_0002_290 Arabidopsis lyrata 71 0.0 1182
WERAM-Art-0023 AT1G62310.1 Arabidopsis thaliana 71 0.0 1167
WERAM-Thc-0081 EOY28779 Theobroma cacao 61 0.0 905
WERAM-Viv-0067 VIT_10s0116g00960.t01 Vitis vinifera 61 0.0 880
WERAM-Sot-0046 PGSC0003DMT400042379 Solanum tuberosum 61 0.0 880
WERAM-Prp-0037 EMJ15852 Prunus persica 60 0.0 875
WERAM-Glm-0193 GLYMA15G11770.2 Glycine max 60 0.0 861
WERAM-Sol-0029 Solyc02g081010.1.1 Solanum lycopersicum 61 0.0 841
WERAM-Met-0115 AES92666 Medicago truncatula 58 0.0 819
WERAM-Pot-0042 POPTR_0004s00770.1 Populus trichocarpa 58 0.0 781
WERAM-Zem-0137 GRMZM2G417089_P01 Zea mays 47 0.0 694
WERAM-Sob-0006 Sb01g015210.1 Sorghum bicolor 46 0.0 677
WERAM-Sei-0128 Si034182m Setaria italica 47 0.0 660
WERAM-Orgl-0039 OGLUM03G23040.1 Oryza glumaepatula 46 1e-179 628
WERAM-Orl-0076 KN539615.1_FGP001 Oryza longistaminata 45 1e-178 624
WERAM-Tra-0176 Traes_5AL_C9FC195D1.2 Triticum aestivum 51 4e-175 612
WERAM-Orr-0107 ORUFI09G09860.1 Oryza rufipogon 52 3e-173 606
WERAM-Ori-0112 BGIOSGA030706-PA Oryza indica 52 6e-173 605
WERAM-Aet-0048 EMT13865 Aegilops tauschii 50 2e-171 600
WERAM-Orbr-0109 OB09G15930.1 Oryza brachyantha 51 2e-169 593
WERAM-Lep-0100 LPERR09G06290.1 Leersia perrieri 45 5e-169 592
WERAM-Php-0022 PP1S144_17V6.1 Physcomitrella patens 41 1e-163 574
WERAM-Orp-0097 OPUNC09G07740.1 Oryza punctata 43 1e-161 568
WERAM-Orm-0094 OMERI09G07170.1 Oryza meridionalis 44 5e-161 566
WERAM-Tru-0042 TRIUR3_19853-P1 Triticum urartu 53 4e-160 563
WERAM-Orb-0104 OBART09G09130.1 Oryza barthii 44 2e-156 550
WERAM-Orni-0101 ONIVA09G08110.1 Oryza nivara 44 1e-155 548
WERAM-Amt-0068 ERN16983 Amborella trichopoda 38 1e-145 514
WERAM-Brd-0109 BRADI4G29617.1 Brachypodium distachyon 57 2e-141 501
WERAM-Mua-0068 GSMUA_Achr4P05350_001 Musa acuminata 48 3e-139 493
WERAM-Org-0037 ORGLA03G0207400.1 Oryza glaberrima 47 8e-139 492
WERAM-Ors-0092 OS09T0393200-01 Oryza sativa 60 5e-133 473
WERAM-Hov-0012 MLOC_12624.1 Hordeum vulgare 43 6e-129 459
WERAM-Leo-0085 ENSLOCP00000011676.1 Lepisosteus oculatus 36 2e-61 235
WERAM-Gam-0008 ENSGMOP00000000972.1 Gadus morhua 37 3e-61 234
WERAM-Orn-0157 ENSONIP00000016309.1 Oreochromis niloticus 37 4e-61 234
WERAM-Tar-0009 ENSTRUP00000002076.1 Takifugu rubripes 37 4e-61 234
WERAM-Xim-0102 ENSXMAP00000009010.1 Xiphophorus maculatus 37 5e-61 233
WERAM-Pof-0098 ENSPFOP00000008824.2 Poecilia formosa 37 6e-61 233
WERAM-Asm-0165 ENSAMXP00000016507.1 Astyanax mexicanus 37 6e-61 233
WERAM-Orla-0053 ENSORLP00000006841.1 Oryzias latipes 36 6e-61 233
WERAM-Gaa-0189 ENSGACP00000023958.1 Gasterosteus aculeatus 35 8e-61 233
WERAM-Pem-0063 ENSPMAP00000006992.1 Petromyzon marinus 35 1e-60 232
WERAM-Dar-0145 ENSDARP00000084278.5 Danio rerio 37 2e-60 232
WERAM-Anp-0111 ENSAPLP00000012780.1 Anas platyrhynchos 36 8e-60 229
WERAM-Tag-0001 ENSTGUP00000000018.1 Taeniopygia guttata 36 9e-60 229
WERAM-Fia-0049 ENSFALP00000003539.1 Ficedula albicollis 36 1e-59 229
WERAM-Meg-0102 ENSMGAP00000010078.1 Meleagris gallopavo 36 1e-59 229
WERAM-Xet-0043 ENSXETP00000014664.3 Xenopus tropicalis 36 1e-59 229
WERAM-Ora-0091 ENSOANP00000016437.2 Ornithorhynchus anatinus 35 1e-59 229
WERAM-Fec-0021 ENSFCAP00000001589.3 Felis catus 36 2e-59 228
WERAM-Mup-0101 ENSMPUP00000009333.1 Mustela putorius furo 36 2e-59 228
WERAM-Aim-0189 ENSAMEP00000017468.1 Ailuropoda melanoleuca 36 2e-59 228
WERAM-Lac-0170 ENSLACP00000020024.1 Latimeria chalumnae 36 2e-59 228
WERAM-Hos-0102 ENSP00000326563.5 Homo sapiens 36 2e-59 228
WERAM-Nol-0092 ENSNLEP00000010895.1 Nomascus leucogenys 36 2e-59 228
WERAM-Gog-0012 ENSGGOP00000000822.2 Gorilla gorilla 36 2e-59 228
WERAM-Otg-0093 ENSOGAP00000008081.2 Otolemur garnettii 36 2e-59 228
WERAM-Orc-0080 ENSOCUP00000007280.2 Oryctolagus cuniculus 36 2e-59 228
WERAM-Loa-0020 ENSLAFP00000001269.3 Loxodonta africana 36 2e-59 228
WERAM-Eqc-0143 ENSECAP00000015928.1 Equus caballus 36 2e-59 228
WERAM-Pat-0141 ENSPTRP00000029560.2 Pan troglodytes 36 2e-59 228
WERAM-Gaga-0080 ENSGALP00000012399.4 Gallus gallus 36 2e-59 228
WERAM-Ptv-0087 ENSPVAP00000007885.1 Pteropus vampyrus 36 2e-59 228
WERAM-Dan-0091 ENSDNOP00000009144.3 Dasypus novemcinctus 36 2e-59 228
WERAM-Bot-0099 ENSBTAP00000013278.4 Bos taurus 36 2e-59 228
WERAM-Caf-0016 ENSCAFP00000001774.3 Canis familiaris 36 2e-59 228
WERAM-Poa-0141 ENSPPYP00000017696.1 Pongo abelii 36 2e-59 228
WERAM-Mam-0003 ENSMMUP00000000618.2 Macaca mulatta 36 2e-59 228
WERAM-Myl-0184 ENSMLUP00000015336.2 Myotis lucifugus 36 2e-59 228
WERAM-Chs-0157 ENSCSAP00000009298.1 Chlorocebus sabaeus 36 2e-59 228
WERAM-Cap-0028 ENSCPOP00000002138.2 Cavia porcellus 36 2e-59 228
WERAM-Sus-0108 ENSSSCP00000015245.2 Sus scrofa 36 2e-59 228
WERAM-Ova-0174 ENSOARP00000017606.1 Ovis aries 36 2e-59 228
WERAM-Mim-0018 ENSMICP00000001555.1 Microcebus murinus 35 2e-59 228
WERAM-Anc-0075 ENSACAP00000007027.2 Anolis carolinensis 35 2e-59 228
WERAM-Ten-0123 ENSTNIP00000013426.1 Tetraodon nigroviridis 37 3e-59 228
WERAM-Paa-0043 ENSPANP00000002578.1 Papio anubis 36 3e-59 228
WERAM-Sah-0129 ENSSHAP00000013821.1 Sarcophilus harrisii 35 3e-59 228
Created Date 25-Jun-2016