WERAM Information

Tag Content
WERAM ID WERAM-Bro-0085
Ensembl Protein ID Bo4g187000.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo4g187000 Bo4g187000.1 Bo4g187000.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 5.00e-14 53.7 451 587
Organism Brassica oleracea
Domain Profile
  Me_Reader PHD
       PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                   ++C +C  d+ +   ++ C +C+++fH+ C+k++  s+peg  wyC sC 
  Bo4g187000.1 451 DMCSIC-GDGGD---LLLCAGCPQAFHTACLKFQ--SMPEG-TWYCSSCS 493
                   58****.44444...8******************..*****.*******7 PP
       PHD.txt   4 ClvCgkddeg.....ekemvqCdeCddwfHlkCvklp....lsslpegkswy.CpsC 50 
                   C++C+ +d+      e++++ Cd+C++ +H+ C+  +    l+++p++ +w+ C+ C
  Bo4g187000.1 532 CVFCRSHDFSigrfdERTVILCDQCEKEYHVGCLRENglcdLKEIPQE-KWFcCNGC 587
                   99**86666655555555*****************9999999****99.88724556 PP
Protein Sequence
(Fasta)		MGEEEGAVSL EGAVLKRERL CVQGEEESPN KKQAKEPSND DVVSEISNPV SSPVENTSRF 60
HPVKSGSGED FGSEETVSDE EQPSEQFVLE IPKHLSSTGV TRITFKLSKQ KKEFDGLPAV 120
KDDHAWDPKL PKKKVVASTS SYPSNVKKLL ATGMLDGAPV KYISLPRVRE LQGVIHSGGY 180
LCGCTNCNFS KQRVLSAYEF ELHAGAKTKH PNNHIFLENG RAVYSIVQEL KTAPHCVFED 240
VIRNVAGSAL CEEGLQAWKG DGQQVSNRVF LTGTVSSNIP LSAIRVENCS YNGQSHDESQ 300
SLTPYSLENH YYREKTYETD ALYEPKRIAK KKITSHVSGT GCHKKVTEGS NRKRDNDLHR 360
LVFMPNGLPD GTELAYYVKT QKLLAGYKQG NGIVCSCCNR EISPSQFEAH AGMAGRRQPY 420
RHIFISSGLS LHDIALSLAN GQIITTGDSD DMCSICGDGG DLLLCAGCPQ AFHTACLKFQ 480
SMPEGTWYCS SCSDGSVSSK KATANGPSGN SKPILIRLSR VVKAPESEIG GCVFCRSHDF 540
SIGRFDERTV ILCDQCEKEY HVGCLRENGL CDLKEIPQEK WFCCNGCSRI HTAVQSSVSC 600
GPQTIPGPLS DMIRRKDREK GIITEDGDTV EWRILSGKSR YPEHLPLLSR AAVIFRECFD 660
PIVAKSGRDL IPVMVYGRNI SGQEFGGMYC LVLIVNSLVV SAALLRIFGQ QVAELPMVAT 720
SREYQGRGYF QGLFACVENL LSSLNVENLV LPAAEEAESI WTNKFGFTKM TEQQLQSYQK 780
EVQLTVFKGT SMLEKKVPKS LSESTTLI 808
Nucleotide Sequence
(Fasta)		ATGGGAGAAG AAGAAGGAGC AGTTTCTCTG GAAGGAGCCG TGCTGAAAAG GGAGCGACTT 60
TGCGTCCAAG GAGAAGAAGA GTCTCCCAAC AAGAAACAAG CCAAGGAGCC TTCCAACGAC 120
GACGTCGTAT CGGAGATTTC GAACCCCGTC TCTTCTCCCG TGGAAAACAC CTCCCGGTTC 180
CACCCGGTTA AATCCGGTTC TGGTGAGGAC TTTGGGTCCG AAGAGACTGT GAGCGACGAA 240
GAACAACCGT CGGAGCAGTT TGTGCTGGAG ATTCCGAAGC ATCTTAGCTC CACGGGAGTC 300
ACGAGGATCA CGTTTAAGTT GAGTAAACAA AAGAAGGAGT TTGATGGTTT GCCTGCGGTT 360
AAGGATGATC ATGCATGGGA TCCGAAGTTG CCGAAGAAGA AGGTTGTTGC TTCTACTAGC 420
AGCTACCCGT CTAATGTGAA GAAGCTTTTG GCGACGGGTA TGCTCGACGG TGCTCCGGTC 480
AAGTATATTT CACTCCCGCG AGTGAGAGAG CTTCAGGGGG TAATCCATTC CGGTGGCTAC 540
TTGTGTGGCT GTACCAATTG CAATTTCTCC AAACAAAGGG TTCTAAGTGC GTATGAGTTT 600
GAGCTGCACG CTGGTGCGAA AACTAAGCAT CCTAATAATC ATATATTTCT GGAGAACGGA 660
AGGGCGGTTT ATAGCATAGT TCAAGAGCTG AAGACTGCTC CTCACTGTGT TTTCGAGGAT 720
GTGATAAGGA ATGTAGCTGG TTCTGCTCTG TGTGAGGAGG GCTTACAAGC TTGGAAAGGT 780
GATGGCCAGC AAGTTTCCAA CAGAGTATTT CTGACAGGAA CCGTATCATC GAACATTCCC 840
CTGTCAGCTA TTCGTGTTGA AAACTGCAGT TATAATGGTC AATCTCATGA TGAAAGTCAG 900
AGCCTTACTC CATACTCTCT GGAAAATCAT TATTATCGAG AGAAAACATA TGAAACAGAC 960
GCGTTATATG AGCCGAAACG GATAGCAAAG AAGAAGATTA CTTCTCATGT ATCTGGTACG 1020
GGTTGCCATA AGAAAGTTAC CGAAGGAAGC AATAGAAAAA GGGACAATGA TTTACACCGG 1080
TTGGTGTTTA TGCCCAATGG GTTACCTGAC GGGACTGAAT TGGCCTACTA TGTGAAAACG 1140
CAGAAACTAC TAGCGGGTTA CAAGCAAGGA AATGGTATAG TATGTAGCTG CTGCAACAGA 1200
GAGATTAGTC CTTCGCAATT CGAAGCACAT GCTGGAATGG CTGGTAGACG ACAACCCTAT 1260
CGTCATATCT TTATCTCTTC CGGACTGTCT TTGCATGATA TAGCCTTGTC GTTGGCAAAT 1320
GGACAAATCA TCACAACCGG TGACAGTGAT GACATGTGTT CTATATGTGG GGATGGTGGA 1380
GATTTGCTGC TTTGTGCTGG GTGCCCTCAA GCATTCCATA CTGCTTGTTT AAAATTTCAG 1440
TCTATGCCTG AAGGTACATG GTACTGTTCG AGCTGCAGTG ATGGATCTGT ATCTAGTAAA 1500
AAGGCTACTG CTAATGGTCC TTCTGGGAAC TCTAAGCCTA TACTAATAAG ACTGTCTAGA 1560
GTCGTTAAAG CTCCAGAAAG CGAAATTGGA GGCTGCGTGT TCTGCAGGTC CCATGATTTT 1620
AGCATCGGAA GATTTGATGA AAGGACTGTC ATTCTATGTG ACCAGTGTGA GAAAGAGTAC 1680
CATGTTGGTT GTCTGAGAGA GAATGGGCTC TGTGATTTAA AAGAAATACC GCAAGAGAAA 1740
TGGTTCTGCT GTAACGGCTG CAGCAGGATT CACACGGCAG TTCAGAGTTC TGTTTCATGT 1800
GGGCCACAAA CTATTCCTGG ACCTTTGTCA GACATGATAC GCAGAAAGGA CAGAGAAAAA 1860
GGAATAATTA CGGAGGATGG GGATACAGTC GAATGGAGGA TACTTAGTGG AAAAAGTCGG 1920
TACCCAGAGC ATCTGCCTTT ACTTTCACGA GCGGCTGTTA TCTTCAGGGA ATGTTTTGAT 1980
CCCATTGTTG CGAAGTCTGG TCGTGATCTC ATTCCTGTCA TGGTGTATGG GAGAAATATA 2040
TCAGGTCAGG AGTTTGGAGG AATGTACTGT TTGGTCCTGA TTGTAAATTC TCTTGTTGTG 2100
TCTGCTGCGC TGCTGAGAAT TTTTGGTCAG CAAGTTGCTG AACTTCCTAT GGTAGCCACA 2160
AGCAGAGAGT ACCAAGGAAG GGGCTACTTC CAAGGGCTGT TTGCTTGTGT GGAGAATCTT 2220
CTTTCTTCTC TAAATGTTGA GAACCTGGTG CTTCCAGCAG CTGAAGAAGC CGAGTCTATA 2280
TGGACAAATA AGTTTGGCTT TACAAAGATG ACTGAGCAGC AATTGCAGAG TTACCAAAAG 2340
GAAGTGCAGC TTACAGTCTT CAAAGGAACC TCAATGCTGG AGAAGAAAGT ACCAAAGAGT 2400
TTATCAGAAT CAACAACTCT CATCTGA 2428
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brr-0089 Bra017181.1-P Brassica rapa 91 0.0 1412
WERAM-Arl-0075 fgenesh2_kg.4__ 1807__ AT2G37520.1 Arabidopsis lyrata 79 0.0 1257
WERAM-Art-0055 AT2G37520.1 Arabidopsis thaliana 78 0.0 1217
WERAM-Thc-0060 EOY07594 Theobroma cacao 58 0.0 862
WERAM-Glm-0110 GLYMA10G05080.2 Glycine max 55 0.0 840
WERAM-Viv-0057 VIT_08s0040g03340.t01 Vitis vinifera 54 0.0 838
WERAM-Prp-0028 EMJ08419 Prunus persica 53 0.0 811
WERAM-Sol-0129 Solyc10g084650.1.1 Solanum lycopersicum 54 0.0 804
WERAM-Met-0020 KEH42376 Medicago truncatula 61 0.0 767
WERAM-Sot-0034 PGSC0003DMT400028730 Solanum tuberosum 65 8e-171 598
WERAM-Mua-0153 GSMUA_AchrUn_randomP08820_001 Musa acuminata 46 1e-149 527
WERAM-Pot-0098 POPTR_0009s00930.1 Populus trichocarpa 44 7e-137 485
WERAM-Sei-0021 Si005834m Setaria italica 43 4e-134 476
WERAM-Orgl-0067 OGLUM06G29720.1 Oryza glumaepatula 42 4e-132 469
WERAM-Amt-0092 ERN04758 Amborella trichopoda 55 1e-131 468
WERAM-Lep-0068 LPERR06G23780.2 Leersia perrieri 41 1e-126 451
WERAM-Zem-0076 GRMZM2G134214_P01 Zea mays 39 1e-123 441
WERAM-Orni-0068 ONIVA06G31450.1 Oryza nivara 40 2e-123 440
WERAM-Orb-0069 OBART06G28330.1 Oryza barthii 40 4e-123 439
WERAM-Orr-0058 ORUFI06G00030.1 Oryza rufipogon 40 4e-122 436
WERAM-Ors-0053 OS06T0101000-01 Oryza sativa 40 5e-122 436
WERAM-Orbr-0067 OB06G10140.1 Oryza brachyantha 40 1e-120 431
WERAM-Tra-0282 Traes_7AL_153E1A74A.2 Triticum aestivum 40 2e-120 431
WERAM-Orm-0055 OMERI06G00010.1 Oryza meridionalis 39 1e-119 428
WERAM-Hov-0034 MLOC_36594.1 Hordeum vulgare 40 2e-119 427
WERAM-Brd-0016 BRADI1G29167.1 Brachypodium distachyon 46 2e-114 411
WERAM-Php-0109 PP1S50_31V6.1 Physcomitrella patens 37 1e-109 394
WERAM-Sob-0140 Sb10g031300.1 Sorghum bicolor 38 1e-108 392
WERAM-Tru-0100 TRIUR3_34738-P1 Triticum urartu 37 1e-108 391
WERAM-Org-0067 ORGLA06G0289000.1 Oryza glaberrima 37 6e-106 382
WERAM-Orp-0055 OPUNC06G00070.1 Oryza punctata 45 8e-105 379
WERAM-Orl-0030 KN538785.1_FGP006 Oryza longistaminata 37 9e-103 372
WERAM-Ori-0069 BGIOSGA022119-PA Oryza indica 44 2e-84 311
WERAM-Sem-0141 EFJ30219 Selaginella moellendorffii 31 4e-38 157
WERAM-Aet-0069 EMT23788 Aegilops tauschii 31 4e-36 150
Created Date 25-Jun-2016