WERAM Information

Tag Content
WERAM ID WERAM-Bro-0084
Ensembl Protein ID Bo4g186380.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo4g186380 Bo4g186380.1 Bo4g186380.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.70e-11 45.6 377 765
Organism Brassica oleracea
Domain Profile
  Me_Reader PHD
       PHD.txt  40 pegkswyCpsCk 51 
                   +++k ++C++Ck
  Bo4g186380.1 377 SKEKCFTCKRCK 388
                   333347777775 PP
       PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                   ++C++C  d+ +   ++ Cd+C+++fH++Cv+lp  s+p g +w+C+ C++
  Bo4g186380.1 623 DLCVIC-ADGGN---LLRCDSCPRAFHIECVSLP--SIPRG-NWHCKYCEK 666
                   58****.66666...9******************..*****.*******86 PP
       PHD.txt   4 ClvCg.....kddegekemvqCdeCddwfHlkCvklp....lsslpegkswyCp 48 
                   C++C+     ++++g ++++ Cd+C++ +H+ C++      l++lp+g +w+C 
  Bo4g186380.1 713 CVLCSgsdfcRSGFGPRTIIICDQCEKEYHIGCLSSHnivdLKELPKG-NWFCS 765
                   777742222244455555*****************999999*******.****7 PP
Protein Sequence
(Fasta)		MKEEFTPGGG GEISSVKRMA ADGGERSGIS CKRIKTTLVN GFIVYTRTRR TKLNKVNEED 60
ESKPTNEVAI NDPIAESSCV NNTVVENSIE KTAVEERLVT GSLAETNITE SSCISNTVVE 120
SFVERTAAEE RVVTGSLAEI MAAEKFKEVD TESASGCSLV DVVIDDIQFE ELLHEAIPVE 180
ILSEGSLDFE VAKHRTMGKR YLASKANRHG SLKRTKQMYK SLLRLKKVNN VVSKDAEVLA 240
GSELDGEGLD EQNRSMSLAG ISNVVVRKRP DTVRELFETG ILDGVSVVYT GTAQSQGFGL 300
RGIITDGGIL CSCSSCDWAN VITTSQFEIH ANKQYKRASQ YICFENGKSL LDVLKICRNA 360
PLHSLRAKVL DAVDSASKEK CFTCKRCKGV CPLSSLGHRG LLCLSCSDIE NSQSSPTATW 420
TPTSAPACIT SLAKSRWKIT RKRSESTLKS PLSISPLGNS TQEITRKALR QALVGKALSA 480
STNISSHNKC RSEFNMLAQH SMTTKALKSV PLSVSSKKRS CRTTRRDQGL HKLVFEREGL 540
PDGTELGYYA RGQKLLGGHK MGTGIYCYCC KCEVSPSVFE AHAGWTSRRK PYFYIYTSNG 600
VSLHEWAMTF SQGRKYSANE NDDLCVICAD GGNLLRCDSC PRAFHIECVS LPSIPRGNWH 660
CKYCEKNSKT ETVGEYNVNS SAPGQLEGVD HADQLAGRCI RVVKNMEAET NGCVLCSGSD 720
FCRSGFGPRT IIICDQCEKE YHIGCLSSHN IVDLKELPKG NWFCSMDCTR INSTLQKLLL 780
GGPETLSDSS LEIVRMKQGI TDVDSVSHLD IGWRLISGKV TSPESRMLLS QALAIFHDCF 840
DPIVDPVSGR NLIPRMVYGK SMQGQDYGGI CCAVLTVNAT VVSAGLLRVF GREVAELPLV 900
ATRMCSREKG YFQLLFSCVE KLLSFLNVES IMVPAAEEAE PLWMNKFGFR KLAPEQLSKY 960
VKVSYQMVRF KGASMLQKPV HSHQITDEKI ETEDNFDLKQ PKELLKMDE 1009
Nucleotide Sequence
(Fasta)		ATGAAGGAAG AGTTTACCCC CGGCGGTGGC GGCGAGATCA GTTCGGTTAA GCGGATGGCT 60
GCAGACGGCG GCGAGAGGAG TGGGATTAGC TGTAAGCGAA TCAAAACGAC TCTGGTCAAT 120
GGTTTCATCG TTTACACTAG AACGAGGAGG ACTAAACTCA ATAAGGTTAA CGAAGAAGAC 180
GAGTCGAAGC CAACAAATGA AGTTGCAATC AATGATCCAA TAGCTGAGAG TTCTTGCGTT 240
AACAATACAG TTGTTGAGAA CTCCATTGAG AAAACTGCTG TGGAAGAGCG CTTAGTTACT 300
GGCAGCTTAG CGGAAACTAA CATCACTGAG AGTTCTTGCA TTAGCAATAC AGTTGTTGAG 360
AGCTTTGTGG AGAGAACTGC TGCGGAAGAG CGCGTAGTTA CTGGCAGCTT AGCTGAGATT 420
ATGGCGGCTG AGAAGTTTAA AGAAGTGGAT ACTGAGAGTG CCAGTGGTTG CTCACTAGTT 480
GATGTTGTGA TTGATGACAT ACAGTTTGAA GAATTGTTAC ATGAAGCGAT TCCAGTAGAG 540
ATTCTTTCCG AAGGGAGCTT GGATTTTGAA GTGGCCAAAC ACAGAACCAT GGGAAAACGC 600
TATTTGGCGT CAAAGGCGAA TAGGCATGGA TCTTTGAAGC GTACGAAACA GATGTATAAA 660
TCGCTTTTGA GACTGAAGAA GGTAAACAAT GTAGTGTCTA AGGATGCAGA GGTTCTGGCA 720
GGATCAGAAT TGGATGGTGA GGGGTTGGAT GAACAGAATC GTTCTATGAG TCTGGCTGGC 780
ATTTCCAATG TAGTAGTCCG CAAAAGGCCA GATACAGTGA GAGAACTTTT TGAGACTGGT 840
ATACTTGATG GTGTGTCGGT GGTCTACACG GGTACTGCTC AGTCTCAAGG CTTTGGTCTC 900
CGTGGCATCA TTACGGATGG TGGAATTTTG TGTTCGTGTT CCTCCTGTGA TTGGGCTAAT 960
GTTATTACAA CTTCCCAATT TGAGATTCAT GCTAATAAGC AATACAAACG AGCATCACAG 1020
TATATTTGCT TTGAGAATGG TAAGAGCCTA CTAGATGTTT TGAAGATTTG TAGGAACGCT 1080
CCTCTACATT CTCTTCGAGC AAAAGTTCTT GATGCTGTTG ATAGTGCGTC TAAAGAAAAA 1140
TGCTTCACCT GTAAAAGATG CAAAGGCGTG TGCCCTTTAT CCTCTCTTGG CCATAGAGGG 1200
TTACTGTGTT TGTCATGCTC AGATATTGAA AATTCTCAGA GCAGCCCTAC TGCGACATGG 1260
ACCCCAACTA GTGCTCCTGC GTGCATAACA TCTCTGGCTA AGAGCAGATG GAAGATAACA 1320
AGAAAGCGAT CAGAATCCAC ATTAAAGTCG CCTCTATCGA TATCACCACT GGGAAATAGC 1380
ACTCAGGAGA TCACAAGAAA GGCATTACGT CAAGCTTTGG TTGGGAAGGC TCTCAGTGCT 1440
TCTACAAATA TATCTTCACA TAATAAGTGC AGATCTGAGT TTAATATGTT AGCCCAACAT 1500
TCTATGACCA CCAAGGCTTT AAAAAGCGTG CCCCTTTCTG TTTCTTCAAA AAAGAGGAGT 1560
TGTAGAACAA CGAGAAGGGA TCAGGGATTG CATAAGTTAG TGTTTGAGAG AGAAGGATTA 1620
CCAGATGGAA CTGAACTAGG ATACTATGCC CGCGGACAGA AATTGCTCGG AGGCCACAAA 1680
ATGGGTACTG GAATTTACTG TTACTGCTGC AAGTGTGAGG TGAGCCCATC CGTCTTCGAA 1740
GCTCATGCAG GCTGGACATC TCGCAGAAAA CCTTATTTTT ACATATATAC ATCTAATGGT 1800
GTTTCTCTTC ACGAATGGGC AATGACTTTC TCACAAGGCC GGAAATATTC TGCTAATGAA 1860
AATGACGACT TGTGTGTCAT TTGTGCTGAT GGTGGAAATC TTCTGCGCTG CGATAGCTGC 1920
CCAAGAGCCT TCCACATAGA ATGCGTTTCC CTTCCAAGTA TTCCTCGTGG TAACTGGCAT 1980
TGCAAATACT GCGAGAAAAA TTCCAAGACC GAGACTGTTG GAGAGTACAA TGTTAATTCT 2040
TCTGCACCTG GTCAACTAGA AGGAGTTGAT CATGCTGATC AGTTAGCTGG ACGATGCATT 2100
CGAGTTGTCA AGAACATGGA AGCTGAAACA AATGGGTGTG TACTATGCAG TGGTTCTGAT 2160
TTTTGCAGAT CCGGATTCGG GCCACGAACG ATCATAATAT GTGATCAGTG TGAAAAGGAG 2220
TACCACATTG GATGTCTGAG TAGTCATAAC ATTGTGGATT TAAAGGAATT ACCTAAAGGA 2280
AATTGGTTTT GCTCTATGGA CTGTACGAGG ATAAACTCCA CTTTGCAGAA GTTACTGCTT 2340
GGTGGGCCGG AGACGCTTTC AGATTCTTCT TTGGAAATAG TACGCATGAA GCAAGGAATA 2400
ACTGATGTTG ATTCCGTCAG TCATCTAGAC ATCGGATGGA GACTGATCAG CGGCAAAGTT 2460
ACTTCTCCTG AAAGCCGGAT GTTGCTGTCT CAGGCGTTGG CTATTTTTCA TGATTGCTTT 2520
GATCCTATAG TTGATCCAGT TTCAGGGCGC AATCTTATTC CAAGAATGGT TTACGGGAAG 2580
AGTATGCAAG GACAAGACTA CGGAGGAATC TGCTGCGCTG TTTTGACTGT GAATGCAACT 2640
GTTGTTTCTG CTGGACTACT ACGAGTATTT GGTCGAGAGG TTGCAGAACT TCCATTAGTT 2700
GCAACACGCA TGTGCAGCCG AGAGAAGGGC TACTTTCAAT TGCTATTTTC CTGCGTTGAG 2760
AAGCTACTCT CATTCCTCAA TGTCGAAAGC ATCATGGTTC CAGCAGCTGA AGAGGCAGAG 2820
CCCTTGTGGA TGAACAAATT TGGCTTCAGA AAACTCGCAC CTGAACAGCT CAGCAAGTAT 2880
GTAAAAGTGA GCTACCAAAT GGTGAGGTTC AAAGGAGCAT CCATGCTGCA GAAACCGGTT 2940
CATTCGCACC AGATCACTGA CGAGAAAATC GAGACTGAAG ACAATTTTGA TTTGAAACAA 3000
CCTAAGGAGT TGTTAAAGAT GGATGAGTGA 3031
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brr-0090 Bra017226.1-P Brassica rapa 95 0.0 1910
WERAM-Arl-0074 fgenesh2_kg.4__ 1712__ AT2G36720.1 Arabidopsis lyrata 76 0.0 1483
WERAM-Art-0054 AT2G36720.1 Arabidopsis thaliana 74 0.0 1451
WERAM-Thc-0061 EOY08018 Theobroma cacao 45 0.0 862
WERAM-Glm-0111 GLYMA10G07170.3 Glycine max 49 0.0 733
WERAM-Sol-0128 Solyc10g083800.1.1 Solanum lycopersicum 48 0.0 712
WERAM-Pot-0076 POPTR_0006s12180.1 Populus trichocarpa 64 0.0 654
WERAM-Prp-0031 EMJ05208 Prunus persica 63 0.0 653
WERAM-Met-0159 AES81946 Medicago truncatula 60 6e-174 608
WERAM-Sot-0011 PGSC0003DMT400009967 Solanum tuberosum 59 1e-167 587
WERAM-Amt-0092 ERN04758 Amborella trichopoda 57 2e-159 561
WERAM-Viv-0039 VIT_06s0061g00840.t01 Vitis vinifera 57 3e-155 546
WERAM-Tra-0282 Traes_7AL_153E1A74A.2 Triticum aestivum 42 1e-153 541
WERAM-Mua-0153 GSMUA_AchrUn_randomP08820_001 Musa acuminata 53 7e-147 519
WERAM-Orgl-0067 OGLUM06G29720.1 Oryza glumaepatula 51 1e-137 488
WERAM-Brd-0016 BRADI1G29167.1 Brachypodium distachyon 47 4e-137 486
WERAM-Sei-0021 Si005834m Setaria italica 50 4e-136 483
WERAM-Sob-0140 Sb10g031300.1 Sorghum bicolor 49 2e-130 464
WERAM-Orni-0068 ONIVA06G31450.1 Oryza nivara 48 1e-127 455
WERAM-Orb-0069 OBART06G28330.1 Oryza barthii 48 2e-127 454
WERAM-Lep-0068 LPERR06G23780.2 Leersia perrieri 48 9e-127 452
WERAM-Tru-0001 TRIUR3_00440-P1 Triticum urartu 47 3e-122 437
WERAM-Ors-0053 OS06T0101000-01 Oryza sativa 48 3e-120 431
WERAM-Orp-0055 OPUNC06G00070.1 Oryza punctata 48 3e-120 431
WERAM-Orr-0058 ORUFI06G00030.1 Oryza rufipogon 48 3e-120 430
WERAM-Orbr-0067 OB06G10140.1 Oryza brachyantha 48 9e-120 429
WERAM-Zem-0076 GRMZM2G134214_P01 Zea mays 47 3e-118 424
WERAM-Hov-0034 MLOC_36594.1 Hordeum vulgare 48 8e-118 422
WERAM-Orm-0055 OMERI06G00010.1 Oryza meridionalis 47 2e-117 421
WERAM-Org-0067 ORGLA06G0289000.1 Oryza glaberrima 44 4e-112 404
WERAM-Php-0109 PP1S50_31V6.1 Physcomitrella patens 42 6e-110 396
WERAM-Ori-0069 BGIOSGA022119-PA Oryza indica 48 5e-108 390
WERAM-Orl-0030 KN538785.1_FGP006 Oryza longistaminata 44 2e-106 385
WERAM-Sem-0141 EFJ30219 Selaginella moellendorffii 31 9e-55 213
WERAM-Aet-0069 EMT23788 Aegilops tauschii 28 8e-44 176
WERAM-Orla-0061 ENSORLP00000007931.1 Oryzias latipes 29 2e-15 82.8
WERAM-Caj-0091 ENSCJAP00000015091.2 Callithrix jacchus 29 2e-15 82.4
WERAM-Poa-0040 ENSPPYP00000004777.1 Pongo abelii 29 2e-15 82.4
WERAM-Mam-0174 ENSMMUP00000024592.2 Macaca mulatta 29 2e-15 82.4
WERAM-Nol-0041 ENSNLEP00000005322.2 Nomascus leucogenys 29 2e-15 82.4
WERAM-Gog-0020 ENSGGOP00000001905.2 Gorilla gorilla 29 2e-15 82.4
WERAM-Paa-0209 ENSPANP00000002367.1 Papio anubis 29 2e-15 82.4
WERAM-Hos-0081 ENSP00000349508.2 Homo sapiens 29 2e-15 82.4
WERAM-Chs-0125 ENSCSAP00000006661.1 Chlorocebus sabaeus 29 2e-15 82.4
WERAM-Xim-0007 ENSXMAP00000001083.1 Xiphophorus maculatus 29 3e-15 81.6
WERAM-Pof-0104 ENSPFOP00000009594.2 Poecilia formosa 29 3e-15 81.6
WERAM-Dar-0151 ENSDARP00000014790.7 Danio rerio 30 4e-15 81.3
WERAM-Chh-0003 ENSCHOP00000000249.1 Choloepus hoffmanni 29 5e-15 81.3
WERAM-Orn-0112 ENSONIP00000011684.1 Oreochromis niloticus 29 5e-15 81.3
WERAM-Eqc-0182 ENSECAP00000019928.1 Equus caballus 29 5e-15 81.3
WERAM-Xet-0118 ENSXETP00000041129.3 Xenopus tropicalis 29 6e-15 80.9
WERAM-Ptv-0138 ENSPVAP00000011854.1 Pteropus vampyrus 29 6e-15 80.9
WERAM-Otg-0102 ENSOGAP00000008965.2 Otolemur garnettii 29 6e-15 80.9
WERAM-Aim-0162 ENSAMEP00000015022.1 Ailuropoda melanoleuca 29 6e-15 80.9
WERAM-Sus-0008 ENSSSCP00000000743.2 Sus scrofa 29 6e-15 80.9
WERAM-Cap-0103 ENSCPOP00000007645.2 Cavia porcellus 29 6e-15 80.9
WERAM-Fec-0075 ENSFCAP00000006385.3 Felis catus 29 6e-15 80.9
WERAM-Mup-0195 ENSMPUP00000016754.1 Mustela putorius furo 29 6e-15 80.9
WERAM-Dan-0007 ENSDNOP00000000870.3 Dasypus novemcinctus 29 7e-15 80.9
WERAM-Anp-0127 ENSAPLP00000014113.1 Anas platyrhynchos 30 7e-15 80.9
Created Date 25-Jun-2016