WERAM Information

Tag Content
WERAM ID WERAM-Bro-0070
Ensembl Protein ID Bo4g073060.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo4g073060 Bo4g073060.1 Bo4g073060.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 5.20e-09 37.7 514 633
Organism Brassica oleracea
Domain Profile
  Me_Reader PHD
       PHD.txt   7 CgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                   C+  ++g  e+++Cd+C++ +H+ C +l+  slp++  w C+ C++
  Bo4g073060.1 514 CRIFQDGG-ELLCCDTCPRSYHIVCAGLS--SLPSE-RWSCKYCVN 555
                   43223332.39******************..***99.9******85 PP
       PHD.txt   6 vCgkddegekemvqCdeCddwfHlkCvklp....lsslpegkswyCps 49 
                   +C + ++++++++ Cd+C++ fH+ C+k      l++l+++ +w+C  
  Bo4g073060.1 588 FC-RLGFNSRTVILCDQCEKVFHVGCLKDHnitdLKELHKD-KWFCSL 633
                   57.67788888*****************9988888899998.****85 PP
Protein Sequence
(Fasta)		MFKSECINSK ANVDVDEDRM NPEREAKDSC AAEGSKSEAN GSGEDHLNAE REAEDTCVAE 60
GSKFDHRNTE KYAKVSEECC VDAGTLVACG RREEEPHEQN CVDPIGLSQT SGLRRCGVKK 120
AVNDTVDRPL RRLTRSLVKQ DSPDLESNTG SSDLGKVDVH ANDVDMDDFQ NLLVTTPNKR 180
GRPRKFIRSF PAKLKELFDS RILEGLTVYY LRCAKMREAG ARGLKGVIKG SGILCFRGAC 240
KGTQVVSPAV YEHHASSTNK RSPEYILLES GFTLRDVMNA CKETPFDTLE EKLRAVVGPD 300
LKKSSLCFSC QGPLVEPCET KSLFFCKACL ERKEPELPIS LSKATGVRRG SPEPSGTIPN 360
EFKSSSIKSS SQKKLTRNSQ SIVCHFERDL RLHKLVFEDD ILPDGTKVGY FVAGKVRSAW 420
QMAFLQLVNV TLSTPTISFI MQKMLVGYKK GFGIHCSCCN KVVSPSAFEA HAGCASRRKP 480
FQHIYTTNGV SLHELSVALS MDQKFSIREN DDICRIFQDG GELLCCDTCP RSYHIVCAGL 540
SSLPSERWSC KYCVNMIERE KFVDSNLNAV AAGRVNIDIF YYVIGNSFCR LGFNSRTVIL 600
CDQCEKVFHV GCLKDHNITD LKELHKDKWF CSLGCKKINT SLGDLIVQGE EKLSNNFLNF 660
IRKKQKPNEE SCPDDNTTPN IRCRIISGKL ASSDDTKEFL KKALLILHER FDPICESGTR 720
GDLVPAMVYG KKAKGHDFSG MYCTMLTVDE VIVSVGIFRV LGSELAELPL VATTRDYQGQ 780
GYFQCLFDCI ERLLGSLNVK QLVLPAADEA KSIWTDKFGF TKMMEEEVKE CRKEYSVMVF 840
HGTSMLRKMV PGTSVADGSK PEDNMEE 867
Nucleotide Sequence
(Fasta)		ATGTTTAAGT CGGAGTGTAT CAATTCTAAG GCTAATGTTG ATGTTGATGA AGATCGTATG 60
AATCCGGAAA GGGAAGCTAA AGATAGTTGT GCTGCTGAAG GTAGCAAATC TGAGGCTAAT 120
GGTTCTGGTG AAGATCATCT AAATGCAGAA AGGGAAGCTG AAGATACTTG TGTTGCTGAA 180
GGTAGCAAAT TTGATCATAG AAATACAGAG AAATATGCTA AAGTTAGTGA AGAATGTTGT 240
GTTGATGCGG GTACTTTAGT GGCATGTGGG AGGAGGGAGG AAGAGCCTCA TGAGCAAAAT 300
TGTGTGGATC CAATTGGGTT ATCGCAGACG AGTGGTCTTA GACGATGTGG TGTTAAGAAG 360
GCAGTGAATG ACACAGTAGA TAGGCCTTTG AGGAGGTTAA CTAGGTCATT AGTCAAACAA 420
GATAGTCCTG ATTTGGAAAG TAACACCGGA TCTTCAGACT TGGGCAAGGT AGATGTGCAT 480
GCCAATGATG TTGACATGGA TGATTTTCAA AATCTGTTGG TTACAACCCC AAACAAACGT 540
GGGAGGCCCA GAAAATTTAT AAGGAGTTTC CCAGCAAAGC TGAAAGAGCT TTTCGATTCT 600
AGAATACTTG AGGGGCTAAC TGTATACTAT CTTCGATGTG CAAAGATGAG AGAGGCAGGG 660
GCTAGAGGGC TTAAAGGAGT AATAAAAGGA TCTGGCATTT TGTGCTTTCG TGGTGCCTGC 720
AAAGGAACTC AAGTGGTTAG CCCGGCTGTG TACGAGCATC ATGCTTCTAG CACAAATAAG 780
CGGTCACCTG AATATATCTT ACTGGAGTCT GGATTCACGC TTCGTGATGT CATGAATGCT 840
TGCAAGGAAA CTCCCTTTGA TACGCTAGAA GAAAAACTTC GCGCGGTAGT TGGACCAGAT 900
TTAAAGAAAT CTAGCCTGTG TTTCAGTTGC CAAGGTCCAT TGGTTGAGCC TTGTGAAACG 960
AAGTCATTAT TTTTTTGCAA AGCGTGTTTG GAGAGAAAGG AACCAGAACT CCCTATCAGT 1020
CTTTCTAAAG CAACTGGCGT TCGTAGGGGG TCACCTGAGC CTTCTGGGAC TATTCCGAAT 1080
GAGTTTAAAT CCAGCTCCAT CAAAAGCAGC AGCCAAAAGA AACTAACCAG AAATTCTCAG 1140
TCTATCGTTT GTCATTTTGA AAGGGATTTG CGGCTGCACA AACTTGTTTT TGAGGATGAT 1200
ATACTGCCAG ATGGGACCAA AGTGGGTTAT TTTGTTGCTG GAAAGGTTAG ATCTGCATGG 1260
CAAATGGCCT TTCTTCAGCT CGTTAATGTA ACTTTATCTA CTCCAACCAT TTCGTTCATT 1320
ATGCAGAAAA TGCTTGTCGG CTACAAGAAG GGATTTGGGA TACATTGTTC TTGTTGCAAC 1380
AAAGTGGTCA GTCCTTCAGC GTTTGAGGCC CATGCTGGCT GTGCAAGTCG TCGGAAGCCG 1440
TTTCAGCACA TTTATACAAC CAATGGCGTA TCTCTTCATG AACTATCAGT AGCGCTATCA 1500
ATGGACCAGA AGTTTTCCAT CCGTGAAAAT GATGACATTT GCCGTATCTT CCAGGACGGG 1560
GGTGAACTCT TGTGTTGTGA TACCTGTCCA AGATCATATC ATATAGTATG TGCTGGTTTA 1620
TCAAGCCTTC CGAGTGAGAG GTGGTCCTGC AAATATTGTG TGAATATGAT TGAGAGGGAG 1680
AAGTTCGTAG ACAGCAATCT TAACGCCGTT GCAGCTGGTA GAGTGAATAT CGATATTTTC 1740
TATTATGTCA TAGGCAATAG TTTTTGCAGG TTGGGCTTCA ATTCTCGCAC TGTGATACTC 1800
TGTGATCAGT GTGAAAAGGT GTTCCATGTT GGCTGTTTGA AAGACCATAA CATTACTGAT 1860
CTCAAGGAGC TACATAAAGA TAAATGGTTT TGTTCCCTTG GGTGCAAAAA GATCAACACT 1920
TCATTAGGCG ATCTGATAGT TCAAGGAGAA GAGAAGCTTA GTAACAATTT CCTGAATTTT 1980
ATACGGAAGA AGCAAAAACC TAATGAAGAA AGCTGTCCAG ATGACAATAC CACTCCAAAC 2040
ATAAGATGTA GGATCATTAG TGGAAAGTTG GCCTCTTCGG ATGATACAAA AGAGTTTCTT 2100
AAGAAGGCAC TTTTGATTCT TCATGAGCGG TTTGATCCCA TCTGTGAATC TGGGACCAGG 2160
GGAGATCTCG TTCCAGCCAT GGTGTATGGA AAGAAAGCAA AAGGCCATGA TTTCAGTGGC 2220
ATGTACTGCA CCATGTTGAC TGTGGATGAA GTGATTGTTT CCGTGGGAAT CTTTAGGGTT 2280
TTAGGGTCTG AACTTGCGGA ACTCCCTCTG GTTGCTACCA CTAGAGATTA TCAAGGGCAG 2340
GGTTACTTTC AGTGCCTGTT TGATTGCATC GAGAGGCTGC TTGGATCCCT AAATGTGAAA 2400
CAACTGGTGC TGCCAGCAGC AGATGAAGCC AAATCCATAT GGACTGACAA ATTTGGTTTC 2460
ACCAAGATGA TGGAAGAGGA GGTGAAAGAA TGCAGAAAAG AGTACTCGGT GATGGTCTTT 2520
CATGGAACAT CAATGTTGAG AAAGATGGTA CCTGGAACGA GTGTTGCTGA CGGAAGTAAA 2580
CCTGAGGACA ATATGGAGGA GTAA 2605
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brr-0063 Bra011988.1-P Brassica rapa 84 0.0 1449
WERAM-Art-0047 AT2G27980.1 Arabidopsis thaliana 65 0.0 1081
WERAM-Thc-0117 EOY33667 Theobroma cacao 50 0.0 719
WERAM-Pot-0098 POPTR_0009s00930.1 Populus trichocarpa 47 0.0 645
WERAM-Viv-0039 VIT_06s0061g00840.t01 Vitis vinifera 42 6e-175 612
WERAM-Glm-0174 GLYMA13G39570.1 Glycine max 43 3e-171 599
WERAM-Prp-0026 EMJ08347 Prunus persica 44 1e-167 587
WERAM-Sol-0136 Solyc11g066480.1.1 Solanum lycopersicum 44 7e-167 585
WERAM-Sot-0002 PGSC0003DMT400001219 Solanum tuberosum 43 2e-165 580
WERAM-Mua-0153 GSMUA_AchrUn_randomP08820_001 Musa acuminata 42 3e-156 550
WERAM-Sei-0021 Si005834m Setaria italica 42 8e-153 538
WERAM-Orgl-0067 OGLUM06G29720.1 Oryza glumaepatula 43 3e-151 533
WERAM-Tra-0282 Traes_7AL_153E1A74A.2 Triticum aestivum 43 6e-145 512
WERAM-Lep-0068 LPERR06G23780.2 Leersia perrieri 40 2e-143 507
WERAM-Orni-0068 ONIVA06G31450.1 Oryza nivara 42 6e-143 505
WERAM-Orb-0069 OBART06G28330.1 Oryza barthii 42 8e-143 505
WERAM-Tru-0001 TRIUR3_00440-P1 Triticum urartu 42 4e-137 486
WERAM-Orm-0055 OMERI06G00010.1 Oryza meridionalis 38 1e-134 478
WERAM-Zem-0076 GRMZM2G134214_P01 Zea mays 35 3e-134 476
WERAM-Orr-0058 ORUFI06G00030.1 Oryza rufipogon 37 3e-132 470
WERAM-Sob-0140 Sb10g031300.1 Sorghum bicolor 37 5e-132 469
WERAM-Ors-0053 OS06T0101000-01 Oryza sativa 37 7e-132 469
WERAM-Brd-0016 BRADI1G29167.1 Brachypodium distachyon 43 2e-131 467
WERAM-Met-0159 AES81946 Medicago truncatula 48 6e-130 462
WERAM-Hov-0034 MLOC_36594.1 Hordeum vulgare 38 9e-130 462
WERAM-Amt-0092 ERN04758 Amborella trichopoda 50 6e-129 459
WERAM-Orbr-0067 OB06G10140.1 Oryza brachyantha 38 3e-128 456
WERAM-Orp-0055 OPUNC06G00070.1 Oryza punctata 38 8e-127 452
WERAM-Org-0067 ORGLA06G0289000.1 Oryza glaberrima 38 1e-126 451
WERAM-Orl-0030 KN538785.1_FGP006 Oryza longistaminata 39 5e-121 432
WERAM-Arl-0074 fgenesh2_kg.4__ 1712__ AT2G36720.1 Arabidopsis lyrata 44 5e-116 416
WERAM-Ori-0069 BGIOSGA022119-PA Oryza indica 46 6e-100 362
WERAM-Php-0096 PP1S412_30V6.1 Physcomitrella patens 33 3e-94 343
WERAM-Aet-0069 EMT23788 Aegilops tauschii 33 2e-48 191
WERAM-Sem-0001 EFJ24916 Selaginella moellendorffii 33 3e-47 187
WERAM-Leo-0071 ENSLOCP00000009062.1 Lepisosteus oculatus 30 2e-13 75.5
WERAM-Orla-0061 ENSORLP00000007931.1 Oryzias latipes 30 3e-13 75.1
WERAM-Dar-0151 ENSDARP00000014790.7 Danio rerio 31 4e-13 74.7
WERAM-Orn-0079 ENSONIP00000008816.1 Oreochromis niloticus 31 4e-13 74.7
WERAM-Caj-0001 ENSCJAP00000000208.2 Callithrix jacchus 32 1e-12 73.2
WERAM-Pof-0104 ENSPFOP00000009594.2 Poecilia formosa 29 2e-12 72.4
WERAM-Anp-0142 ENSAPLP00000015426.1 Anas platyrhynchos 30 2e-12 72.0
WERAM-Xim-0007 ENSXMAP00000001083.1 Xiphophorus maculatus 29 2e-12 72.0
WERAM-Tag-0164 ENSTGUP00000013727.1 Taeniopygia guttata 30 3e-12 71.6
WERAM-Cap-0209 ENSCPOP00000020779.1 Cavia porcellus 30 3e-12 71.6
WERAM-Sah-0040 ENSSHAP00000004678.1 Sarcophilus harrisii 31 3e-12 71.6
WERAM-Meg-0141 ENSMGAP00000014906.2 Meleagris gallopavo 30 4e-12 71.2
WERAM-Gaga-0128 ENSGALP00000023294.4 Gallus gallus 30 4e-12 71.2
WERAM-Pes-0148 ENSPSIP00000017808.1 Pelodiscus sinensis 30 5e-12 70.9
WERAM-Fia-0067 ENSFALP00000004982.1 Ficedula albicollis 30 5e-12 70.9
WERAM-Mim-0059 ENSMICP00000006034.1 Microcebus murinus 31 6e-12 70.9
WERAM-Ten-0044 ENSTNIP00000001486.1 Tetraodon nigroviridis 29 6e-12 70.9
WERAM-Ere-0102 ENSEEUP00000010821.1 Erinaceus europaeus 31 8e-12 70.5
Created Date 25-Jun-2016