WERAM Information

Tag Content
WERAM ID WERAM-Brr-0063
Ensembl Protein ID Bra011988.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra011988 Bra011988.1 Bra011988.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 6.30e-10 40.1 624 768
Organism Brassica rapa
Domain Profile
  Me_Reader PHD
        PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                    +iC++C +d+ +   +++Cd+C++ +H+ C +l+  slp++  w C+ C++
  Bra011988.1-P 624 DICRIC-QDGGE---LLCCDTCPRSYHIVCAGLS--SLPNE-RWSCKYCVN 667
                    69****.55554...9******************..***99.9******85 PP
        PHD.txt   3 iClvCg.....kddegekemvqCdeCddwfHlkCvklp....lsslpegkswyCps 49 
                    +C++C+     + ++++++++ Cd+C++ fH+ C+k      l++lp++ +w+C  
  Bra011988.1-P 714 VCVLCRghsfcRLGFNSRTVILCDQCEKEFHVGCLKDHniadLKELPKD-KWFCSL 768
                    7888853444456666777*****************9999999999999.****85 PP
Protein Sequence
(Fasta)		MAKGTSPGET MIRTGCKREL QFMLKSQSEI CGGLSLGRTR GSKTSTTSTD AKRLTTRLLL 60
RSGIKKMRED AAMSDSPVEE EEEKSDVVDA VREAVKERSI VVEREIVLAC PSSFSELAKL 120
TSRSCLVKLK SGLGYEMPAR RLTRSMFKPE ADEDHMNLGR EAKDTCVAEG SEFEATLVAC 180
GREEEESHEQ NSVVSIGLSL TSGLRRCGVK KGVNDTVDRP LRRLTRSLVK QDSPDLESNT 240
GSSDLGNVDV NADDVGMDGF QNPLVTTPNK RGRPRKFIRS FPAKLKELFD SGMLEGLTVY 300
YLRCAKIREA GARGLKGVIK GSGVLCFCGA CKGAQVVSPA VYEHHASSTN KRSPEYILLE 360
SGFTLCDVMN ACKETPFDTL EEKLRAVVGP DLKKSSLCFS CQGPLVEPCE TKSLFFCKAC 420
LERKEPDLSI SPSKATGVRR GSSKPTLVPK TIIDRSTPSP RQSNRRENPT QKSPEPSGTI 480
PNESKSSSIK SSSQRKLTRK DLRLHKLVFE DDILPDGTEV GYFVAGKVRS AWQMAFLQLV 540
NVTLSTPTIS FIMQKMLVGY KKGFGIHCSC CNKVVSPSAF EAHAGCASRR KPFQHIYTTN 600
GVSLHELSVA LSMDQKFSIR ENDDICRICQ DGGELLCCDT CPRSYHIVCA GLSSLPNERW 660
SCKYCVNMIE REKFVDSNLN AVAAGRVRGV DAIAQIATRC IRIVSSLASE LPSVCVLCRG 720
HSFCRLGFNS RTVILCDQCE KEFHVGCLKD HNIADLKELP KDKWFCSLGC KKINTSLGDL 780
IVQGEEKLSN NFLNFIRKKQ NTNEESCPDD NTTPNIRCRI ISGKLAPSDD TKEFLKKALL 840
ILHERFDPIC ESGTRGDLIP AMVYGKKAKG HDFSGMYCTM LTVDEVIVSV GIFRVLGSEL 900
AELPLVATTR DYQGQGYFQC LFDCIERLLG SLNVKQLVLP AADEAKSIWT DKFGFTKMTE 960
EEVKECRKDY SVMVFHGTSM LRKMVPGTSV ADGSKPEKDS MEE 1003
Nucleotide Sequence
(Fasta)		ATGGCGAAAG GCACATCCCC AGGCGAGACC ATGATCCGCA CAGGCTGCAA AAGGGAACTC 60
CAATTCATGC TCAAATCTCA GTCCGAGATC TGCGGCGGCC TCTCTCTTGG CCGCACCCGT 120
GGAAGCAAAA CCTCCACGAC AAGCACCGAC GCCAAGAGGC TCACCACTCG CCTTCTTCTT 180
CGCTCTGGGA TTAAGAAGAT GCGCGAGGAT GCTGCAATGT CCGATTCTCC TGTTGAAGAA 240
GAAGAAGAAA AGAGCGACGT TGTTGATGCA GTTAGAGAGG CTGTAAAGGA ACGTTCGATT 300
GTGGTTGAGA GAGAGATCGT TCTGGCGTGT CCTTCTAGTT TTAGTGAGCT GGCAAAGCTT 360
ACTTCAAGAT CTTGCCTTGT TAAGTTGAAG AGTGGTCTTG GTTATGAGAT GCCTGCTAGG 420
AGGTTGACCC GATCCATGTT CAAGCCTGAG GCTGATGAAG ATCATATGAA TCTGGGAAGG 480
GAAGCTAAAG ATACTTGTGT TGCTGAAGGT AGCGAATTTG AGGCTACTTT AGTGGCATGT 540
GGGAGGGAGG AGGAAGAGTC TCATGAGCAA AATAGTGTGG TTTCGATTGG ATTATCGCTG 600
ACGAGTGGTC TTAGACGATG TGGTGTTAAG AAGGGAGTGA ATGATACAGT AGATAGGCCT 660
TTGAGGAGGT TAACTAGGTC ATTAGTCAAA CAAGACAGTC CTGATTTGGA AAGTAACACC 720
GGATCTTCAG ACTTGGGCAA TGTAGATGTG AATGCCGATG ATGTCGGCAT GGATGGTTTT 780
CAGAATCCGT TGGTTACAAC TCCAAACAAA CGTGGGAGGC CAAGAAAATT TATAAGGAGT 840
TTCCCAGCAA AGCTGAAAGA GCTTTTCGAT TCTGGAATGC TTGAGGGGCT AACTGTGTAC 900
TATCTTCGAT GTGCAAAGAT AAGAGAGGCA GGGGCTAGAG GGCTTAAAGG AGTAATTAAA 960
GGATCTGGCG TTTTGTGCTT TTGTGGTGCC TGCAAAGGAG CTCAAGTGGT TAGCCCCGCA 1020
GTGTACGAGC ATCATGCTTC TAGCACAAAT AAGCGGTCAC CTGAATATAT CTTACTGGAA 1080
TCTGGATTCA CACTTTGTGA TGTCATGAAC GCTTGCAAGG AAACTCCCTT TGATACGCTA 1140
GAAGAAAAAC TTCGTGCGGT AGTTGGACCA GATTTAAAGA AATCTAGCCT GTGTTTCAGT 1200
TGCCAAGGTC CATTGGTTGA GCCTTGTGAA ACAAAGTCAT TATTTTTTTG CAAAGCGTGT 1260
TTGGAGAGAA AGGAACCCGA CCTCTCTATC AGTCCTTCTA AAGCAACTGG CGTTCGTAGG 1320
GGATCGTCTA AGCCAACTTT GGTTCCGAAA ACTATCATTG ATAGGTCAAC ACCCAGTCCT 1380
CGCCAAAGTA ACAGGCGTGA AAACCCAACC CAAAAGTCAC CTGAGCCTTC AGGGACTATT 1440
CCGAATGAGT CTAAATCCAG CTCCATCAAA AGCAGCAGCC AAAGGAAACT AACCAGAAAG 1500
GATTTGCGGC TGCACAAACT TGTTTTTGAG GATGACATAC TGCCAGATGG GACCGAAGTG 1560
GGTTATTTTG TTGCTGGAAA GGTTAGATCT GCATGGCAAA TGGCCTTTCT CCAGCTCGTT 1620
AATGTAACTT TATCTACTCC AACCATTTCG TTCATTATGC AGAAAATGCT TGTCGGCTAC 1680
AAGAAGGGAT TTGGGATACA TTGTTCTTGT TGCAACAAAG TGGTCAGTCC TTCAGCGTTT 1740
GAGGCCCATG CTGGCTGTGC AAGTCGCCGG AAGCCGTTTC AGCACATTTA TACAACCAAT 1800
GGCGTATCTC TTCATGAACT ATCAGTAGCG CTATCAATGG ACCAGAAGTT TTCCATCCGT 1860
GAAAATGATG ACATTTGCCG TATCTGCCAG GACGGGGGTG AACTCTTGTG TTGTGATACC 1920
TGTCCAAGAT CATATCATAT AGTATGTGCT GGTTTATCAA GCCTTCCGAA TGAGAGGTGG 1980
TCCTGCAAAT ATTGTGTGAA TATGATTGAG AGGGAGAAGT TTGTGGACAG CAATCTTAAC 2040
GCCGTTGCAG CTGGTAGAGT TCGTGGAGTT GATGCAATTG CTCAGATAGC CACAAGATGC 2100
ATTCGAATTG TCAGCTCTCT TGCGAGTGAG CTCCCAAGTG TATGCGTGTT ATGCAGAGGC 2160
CATAGTTTTT GCAGGTTGGG CTTCAACTCT CGCACTGTGA TACTCTGTGA TCAGTGTGAA 2220
AAGGAGTTCC ATGTTGGCTG TTTGAAAGAC CATAACATTG CTGATCTCAA GGAGCTACCT 2280
AAAGATAAAT GGTTTTGTTC CCTTGGGTGC AAAAAGATCA ACACTTCATT AGGCGATCTG 2340
ATAGTTCAAG GAGAAGAGAA GCTTAGTAAC AATTTCCTGA ATTTTATACG GAAGAAGCAA 2400
AACACTAATG AAGAAAGCTG TCCAGATGAC AATACCACTC CAAACATAAG ATGTAGGATC 2460
ATTAGTGGAA AGTTGGCCCC TTCGGATGAT ACAAAAGAGT TTCTTAAGAA GGCACTTTTG 2520
ATTCTTCATG AGCGGTTTGA TCCCATCTGT GAATCTGGGA CCAGGGGAGA TCTCATTCCA 2580
GCCATGGTGT ATGGAAAGAA AGCAAAAGGC CATGATTTTA GTGGCATGTA CTGCACCATG 2640
TTGACTGTGG ATGAAGTGAT TGTTTCCGTG GGAATCTTTA GGGTTTTAGG GTCTGAACTT 2700
GCGGAACTCC CTCTGGTTGC TACCACTAGA GATTATCAAG GGCAGGGTTA CTTTCAGTGC 2760
CTGTTTGATT GCATCGAGAG GCTGCTTGGA TCCCTAAACG TGAAACAACT GGTGCTGCCA 2820
GCAGCAGATG AAGCCAAATC CATATGGACT GACAAATTTG GTTTCACCAA GATGACGGAA 2880
GAGGAGGTGA AAGAATGCAG AAAAGACTAC TCGGTGATGG TTTTTCATGG AACATCAATG 2940
TTGAGAAAGA TGGTACCTGG AACGAGTGTT GCTGACGGGA GTAAACCTGA GAAGGACAGT 3000
ATGGAGGAGT AA 3013
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0070 Bo4g073060.1 Brassica oleracea 84 0.0 1431
WERAM-Art-0047 AT2G27980.1 Arabidopsis thaliana 70 0.0 1260
WERAM-Thc-0117 EOY33667 Theobroma cacao 52 0.0 781
WERAM-Pot-0098 POPTR_0009s00930.1 Populus trichocarpa 49 0.0 706
WERAM-Glm-0148 GLYMA12G30320.3 Glycine max 45 0.0 650
WERAM-Prp-0026 EMJ08347 Prunus persica 46 0.0 640
WERAM-Sol-0136 Solyc11g066480.1.1 Solanum lycopersicum 46 0.0 635
WERAM-Mua-0153 GSMUA_AchrUn_randomP08820_001 Musa acuminata 45 5e-172 602
WERAM-Sei-0021 Si005834m Setaria italica 43 9e-167 585
WERAM-Orgl-0067 OGLUM06G29720.1 Oryza glumaepatula 44 5e-164 576
WERAM-Tra-0282 Traes_7AL_153E1A74A.2 Triticum aestivum 47 3e-160 563
WERAM-Sot-0002 PGSC0003DMT400001219 Solanum tuberosum 55 2e-157 554
WERAM-Lep-0068 LPERR06G23780.2 Leersia perrieri 41 3e-156 550
WERAM-Orni-0068 ONIVA06G31450.1 Oryza nivara 44 6e-156 549
WERAM-Orb-0069 OBART06G28330.1 Oryza barthii 44 2e-155 547
WERAM-Arl-0074 fgenesh2_kg.4__ 1712__ AT2G36720.1 Arabidopsis lyrata 40 2e-154 543
WERAM-Viv-0039 VIT_06s0061g00840.t01 Vitis vinifera 54 9e-153 538
WERAM-Amt-0092 ERN04758 Amborella trichopoda 42 1e-150 531
WERAM-Orm-0055 OMERI06G00010.1 Oryza meridionalis 39 7e-148 522
WERAM-Zem-0076 GRMZM2G134214_P01 Zea mays 39 4e-147 520
WERAM-Ors-0053 OS06T0101000-01 Oryza sativa 38 7e-146 515
WERAM-Orr-0058 ORUFI06G00030.1 Oryza rufipogon 38 3e-145 513
WERAM-Met-0159 AES81946 Medicago truncatula 53 4e-145 513
WERAM-Hov-0034 MLOC_36594.1 Hordeum vulgare 40 1e-141 501
WERAM-Orbr-0067 OB06G10140.1 Oryza brachyantha 38 2e-141 501
WERAM-Brd-0016 BRADI1G29167.1 Brachypodium distachyon 44 1e-140 498
WERAM-Org-0067 ORGLA06G0289000.1 Oryza glaberrima 40 3e-137 487
WERAM-Orl-0030 KN538785.1_FGP006 Oryza longistaminata 40 3e-132 470
WERAM-Tru-0100 TRIUR3_34738-P1 Triticum urartu 38 7e-132 469
WERAM-Sob-0140 Sb10g031300.1 Sorghum bicolor 48 2e-126 451
WERAM-Orp-0055 OPUNC06G00070.1 Oryza punctata 47 2e-119 428
WERAM-Php-0109 PP1S50_31V6.1 Physcomitrella patens 33 4e-106 384
WERAM-Ori-0069 BGIOSGA022119-PA Oryza indica 48 5e-106 383
WERAM-Sem-0001 EFJ24916 Selaginella moellendorffii 32 6e-49 193
WERAM-Aet-0069 EMT23788 Aegilops tauschii 31 7e-49 193
WERAM-Caj-0001 ENSCJAP00000000208.2 Callithrix jacchus 30 3e-14 78.6
WERAM-Cap-0209 ENSCPOP00000020779.1 Cavia porcellus 30 7e-14 77.4
WERAM-Gaa-0207 ENSGACP00000025482.1 Gasterosteus aculeatus 32 8e-14 77.0
WERAM-Orla-0187 ENSORLP00000021515.1 Oryzias latipes 28 2e-13 75.9
WERAM-Orn-0112 ENSONIP00000011684.1 Oreochromis niloticus 29 3e-13 75.5
WERAM-Pof-0154 ENSPFOP00000012650.2 Poecilia formosa 29 3e-13 75.5
WERAM-Tar-0183 ENSTRUP00000038299.1 Takifugu rubripes 28 4e-13 74.7
WERAM-Asm-0115 ENSAMXP00000011496.1 Astyanax mexicanus 28 8e-13 73.9
WERAM-Ten-0159 ENSTNIP00000015977.1 Tetraodon nigroviridis 29 1e-12 73.6
WERAM-Anc-0062 ENSACAP00000006236.3 Anolis carolinensis 28 1e-12 73.6
WERAM-Anp-0142 ENSAPLP00000015426.1 Anas platyrhynchos 30 1e-12 73.2
WERAM-Xet-0118 ENSXETP00000041129.3 Xenopus tropicalis 27 3e-12 72.0
WERAM-Leo-0071 ENSLOCP00000009062.1 Lepisosteus oculatus 27 3e-12 71.6
WERAM-Dar-0054 ENSDARP00000127601.1 Danio rerio 28 5e-12 71.2
WERAM-Eqc-0182 ENSECAP00000019928.1 Equus caballus 28 5e-12 71.2
WERAM-Tag-0164 ENSTGUP00000013727.1 Taeniopygia guttata 27 6e-12 70.9
Created Date 25-Jun-2016