WERAM Information

Tag Content
WERAM ID WERAM-Bro-0014
Ensembl Protein ID Bo1g098000.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo1g098000 Bo1g098000.1 Bo1g098000.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 2.20e-11 45.2 277 343
Organism Brassica oleracea
Domain Profile
  Ac_Reader Bromodomain
     BROMO.txt   2 ehevsepFrepvdpqleipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenks 69 
                   ++e++ +Fr++ d  ++   Y+++++++mdL+tik+r++++  ss++e+  D+ l+ nNa  ++++++
  Bo1g098000.1 277 QNECALVFRRRLDS-QKRARYKKLVQRHMDLDTIKSRINSRSISSAKELFMDFLLLANNAAIFYSKNT 343
                   578999********.8************************************************9986 PP
Protein Sequence
(Fasta)		MVMMMLTKKM EMESDWGTWE ELLLGGAVLR HGTGDWTVVS EELRSHSMSG IFTPEICKAK 60
YKDLRERYLG CKSWYEEVKK KRVAELKAAL LKSQDSIGSL ESKLESLKSE SNDECHENND 120
YDSSRTLSLE PPSPKSEGGG ECTSKDTSKD LSSAGSFTQQ ELTTTNWSPP QAKSEAIKEQ 180
DKKNNLLHGD IFRSMYGVGG GGGQVLPIMR KKRGKRKRKD CSASKDVTAV EESHMLDSSN 240
VDIASNSRSK EAASTSSRGH GLALPGEILK IYNTISQNEC ALVFRRRLDS QKRARYKKLV 300
QRHMDLDTIK SRINSRSISS AKELFMDFLL LANNAAIFYS KNTREHKSAV SLRDIVTKSL 360
RHYLTEDHHP PHRSSSVTTS TKVLVPALTS KSPSVRTSVG VKKPRTGAYP LKKVEQDTVK 420
TTSGGGRKRL VTDSPVAAVK SSAASKKVTA VERRRRDAKQ VNGGHDSPAL AGRKRNRVR 479
Nucleotide Sequence
(Fasta)		ATGGTTATGA TGATGTTGAC GAAGAAGATG GAGATGGAGA GCGATTGGGG AACATGGGAG 60
GAGCTTCTTC TCGGGGGCGC AGTACTCCGT CACGGAACCG GCGACTGGAC CGTCGTCTCC 120
GAAGAACTCC GTTCTCATTC TATGTCCGGA ATTTTCACAC CTGAGATATG CAAGGCTAAG 180
TACAAGGACT TGCGTGAACG TTATTTGGGA TGCAAATCTT GGTATGAAGA GGTTAAGAAG 240
AAACGAGTAG CTGAGCTTAA GGCAGCTTTA CTTAAATCCC AAGACTCCAT TGGGTCGTTG 300
GAATCAAAGC TTGAGAGTCT GAAATCAGAA AGCAATGATG AATGTCATGA AAACAATGAT 360
TATGATTCAA GCCGAACATT ATCCCTCGAA CCACCTTCCC CCAAGTCTGA AGGCGGTGGT 420
GAATGCACGA GCAAAGATAC ATCCAAAGAC CTGTCATCTG CTGGTAGTTT CACACAGCAA 480
GAGCTCACCA CAACAAACTG GTCTCCGCCA CAGGCCAAGT CAGAAGCAAT TAAAGAGCAA 540
GACAAGAAGA ATAATCTATT ACACGGCGAC ATCTTTCGGT CCATGTACGG AGTAGGAGGA 600
GGAGGAGGAC AAGTGCTTCC AATTATGAGA AAGAAACGAG GAAAGAGAAA AAGAAAAGAT 660
TGCAGCGCCA GTAAAGATGT TACCGCTGTG GAGGAAAGCC ATATGTTGGA TTCTTCTAAC 720
GTGGACATTG CAAGCAATTC TAGGAGTAAA GAAGCTGCTT CTACTAGCAG CCGAGGCCAC 780
GGTTTGGCTT TACCAGGAGA GATTCTGAAG ATATACAACA CTATCTCACA GAACGAATGT 840
GCTCTTGTCT TTCGAAGACG GCTTGATAGT CAGAAAAGGG CAAGGTACAA GAAACTGGTC 900
CAGAGGCATA TGGACTTAGA CACTATAAAA TCAAGAATCA ACAGTCGTTC CATATCTTCA 960
GCTAAAGAGC TTTTCATGGA CTTTCTTTTG TTGGCGAACA ATGCAGCCAT TTTTTACTCT 1020
AAGAACACTC GGGAGCACAA ATCCGCTGTG TCCCTCAGAG ACATTGTCAC CAAGTCTCTT 1080
AGACATTATT TGACAGAAGA TCATCATCCT CCTCATCGCA GCAGCAGCGT TACTACAAGC 1140
ACCAAGGTTC TAGTTCCCGC TTTGACATCT AAGTCTCCTT CGGTCCGAAC CAGCGTGGGA 1200
GTTAAAAAAC CAAGAACCGG GGCATACCCT CTTAAAAAGG TTGAGCAGGA TACGGTGAAG 1260
ACGACTTCAG GCGGTGGTAG AAAAAGGCTT GTTACGGATT CACCAGTTGC TGCAGTGAAA 1320
TCCTCAGCGG CGAGTAAGAA AGTTACGGCG GTAGAGAGGA GAAGAAGAGA TGCTAAACAA 1380
GTGAATGGTG GACACGATTC TCCTGCATTG GCAGGGAGAA AGCGGAATAG AGTGAGATGA 1440
1441
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brr-0154 Bra031444.1-P Brassica rapa 94 0.0 765
WERAM-Arl-0120 scaffold_200471.1 Arabidopsis lyrata 78 2e-171 599
WERAM-Art-0022 AT1G61215.1 Arabidopsis thaliana 77 8e-169 590
WERAM-Thc-0079 EOY28363 Theobroma cacao 49 5e-73 272
WERAM-Glm-0191 GLYMA15G07500.1 Glycine max 47 2e-59 227
WERAM-Prp-0058 EMJ13280 Prunus persica 47 1e-55 215
WERAM-Sot-0030 PGSC0003DMT400028077 Solanum tuberosum 42 6e-54 209
WERAM-Pot-0044 POPTR_0004s03710.1 Populus trichocarpa 48 3e-48 190
WERAM-Met-0107 AES90380 Medicago truncatula 63 4e-39 159
WERAM-Orr-0081 ORUFI07G19680.1 Oryza rufipogon 34 3e-38 157
WERAM-Ori-0078 BGIOSGA024080-PA Oryza indica 34 3e-38 157
WERAM-Ors-0071 OS07T0565300-01 Oryza sativa 34 3e-38 157
WERAM-Brd-0012 BRADI1G24580.1 Brachypodium distachyon 35 5e-38 156
WERAM-Orni-0041 ONIVA04G17620.1 Oryza nivara 33 9e-38 155
WERAM-Sol-0027 Solyc02g078810.2.1 Solanum lycopersicum 57 2e-29 127
WERAM-Tra-0071 Traes_2BS_832F28506.1 Triticum aestivum 45 1e-25 114
WERAM-Aet-0053 EMT30824 Aegilops tauschii 45 3e-24 110
WERAM-Hov-0062 MLOC_56125.1 Hordeum vulgare 44 3e-24 110
WERAM-Amt-0004 ERN03421 Amborella trichopoda 62 3e-24 110
WERAM-Zem-0131 GRMZM2G402804_P01 Zea mays 47 4e-24 110
WERAM-Sob-0035 Sb02g036530.1 Sorghum bicolor 46 8e-24 108
WERAM-Sei-0112 Si029233m Setaria italica 44 1e-22 105
WERAM-Tru-0068 TRIUR3_26205-P1 Triticum urartu 43 2e-21 101
WERAM-Sem-0100 EFJ37441 Selaginella moellendorffii 31 1e-12 72.0
WERAM-Mua-0141 GSMUA_Achr9P20120_001 Musa acuminata 40 7e-12 69.3
WERAM-Lep-0092 LPERR08G16990.1 Leersia perrieri 30 2e-11 67.8
WERAM-Org-0093 ORGLA08G0177200.1 Oryza glaberrima 32 8e-11 65.9
WERAM-Orgl-0092 OGLUM08G21320.1 Oryza glumaepatula 31 9e-11 65.9
WERAM-Orp-0090 OPUNC08G18190.1 Oryza punctata 36 1e-10 65.1
WERAM-Php-0024 PP1S148_42V6.1 Physcomitrella patens 39 1e-09 62.0
WERAM-Orb-0096 OBART08G20090.1 Oryza barthii 35 1e-09 62.0
WERAM-Viv-0085 VIT_13s0156g00340.t01 Vitis vinifera 35 4e-09 60.5
Created Date 25-Jun-2016