WERAM Information

Tag Content
WERAM ID WERAM-Arl-0004
Ensembl Protein ID Al_scaffold_0002_290
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Al_scaffold_0002_290 Al_scaffold_0002_290 Al_scaffold_0002_290
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM2 4.60e-73 246 642 869
Organism Arabidopsis lyrata
Domain Profile
  HDM JHDM2
             JHDM2.txt   4 krdgklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvy.............vgilkkkwaeedlkell.k 78 
                           +r+g lN+a+klp+ f++pdlgPk+y AyG+  e +r+++ t+lh+d+sdavnil++             v  lk+k++++++ + +  
  Al_scaffold_0002_290 642 PRTGILNIATKLPEGFIKPDLGPKTYIAYGIPDELGRGDSMTKLHCDMSDAVNILTHtaevtlsqeqisaVKALKQKHKQQNMFDKQsT 730
                           47899**************************************************************9999999999999887665415 PP
             JHDM2.txt  79 sieeeeldevtrkrvqdp..kekpgalWhifaakdaekirellekvskeqga....evppdhdpihdqswyldrklrkrLfeeyGvegw 161
                           ++ +ee++e+    + +   +e+ +alW+if+++d++k++e+l+k +ke+++    +v ++++pihdq++yl+ +++++L+ e+G+e+w
  Al_scaffold_0002_290 731 EFCSEEVEELNMPEILSNenDETGSALWDIFRREDVPKLEEYLRKYCKEFRHtyccPVTKVYHPIHDQTCYLTLEHKRKLKAEFGIEPW 819
                           6888899999988886551156679***************************99998999***************************** PP
             JHDM2.txt 162 tlvQklgdavlipagapHqvqnlkscvkvaedFvsPEnvkecfrltkeyr 211
                           t+vQklg+av+ipag+pHqv+nlksc kva dFvsPEn++ec+rlt+e+r
  Al_scaffold_0002_290 820 TFVQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENIHECLRLTEEFR 869
                           ************************************************98 PP
Protein Sequence
(Fasta)		MDSGVKLEQL SYQYSWTTRK KRSLKPFKSK GFSSSSSSRE DGETRAKVFN RKRKHSRDDS 60
DDSAVNKNAK RRRNICKVEE IGDEYYEDDD CILGDWVRRN TAKRIDKRKE EVMVTIESGE 120
YLEGDDCTVG NWFSDVSSKR KDKRQVELEE DEEWEEELRL CCKIKATSSR SRTRNLSSNS 180
PENVTDVSPS RSRSPASDVS DSILKNGISN ESKEGGPICH QCLKGERITL LICSECEETM 240
YCLKCIRKWY PHLSEDDVVE KCPFCRQNCN CSKCLHLNGL IETSKRELAN CERRRHLQYL 300
VTLMLPFLNK LSKFQKQEIE FEAKVQGLLP SEVKITETIN YTDERVYCDH CATSIEDLHR 360
SCPKCSYELC LKCCQEIREG SLSERPEMKS HYVDRGYRYM HGLDTAEPGS SSTSEDEEAN 420
PSDAKWNFGD NGSITCAPEN LGGCGDCVLE LKRILPLTLM SDLEHKAETF LSSYNISPRM 480
LNCRCSSLET EMTRKAASRT KSSDNYLFCP ESLGVLKEEG LLHFQEHWAK GEPVIVRNTL 540
DNTPGLSWEP MVMWRALCEN VNSTASSQMS QVKAIDCLAN CEVEINTRHF FEGYSKGRTY 600
ENFWPEMLKL KDWPPSDKFE DLLPRHCDEF ISALPFQEYS NPRTGILNIA TKLPEGFIKP 660
DLGPKTYIAY GIPDELGRGD SMTKLHCDMS DAVNILTHTA EVTLSQEQIS AVKALKQKHK 720
QQNMFDKQST EFCSEEVEEL NMPEILSNEN DETGSALWDI FRREDVPKLE EYLRKYCKEF 780
RHTYCCPVTK VYHPIHDQTC YLTLEHKRKL KAEFGIEPWT FVQKLGEAVF IPAGCPHQVR 840
NLKSCTKVAV DFVSPENIHE CLRLTEEFRQ LPKNHKARED KLEASLLSLY LIYPFDFVGC 900
DHIAYLLMRW GLFSGYLNSI RRDGQLNQTK T 931
Nucleotide Sequence
(Fasta)		ATGGATTCTG GTGTTAAGTT GGAGCAACTT TCTTATCAAT ATTCGTGGAC GACGAGGAAG 60
AAGAGAAGTC TGAAACCATT TAAGTCGAAA GGTTTTAGCA GTAGTAGTAG TAGTAGGGAA 120
GATGGTGAGA CGAGAGCGAA AGTCTTTAAC AGGAAACGGA AGCATTCGAG AGATGATAGC 180
GATGATTCAG CGGTTAATAA GAATGCGAAA AGAAGGAGAA ATATATGCAA AGTAGAAGAA 240
ATCGGTGATG AGTATTATGA AGATGATGAT TGCATATTAG GTGATTGGGT TCGGAGGAAT 300
ACTGCGAAAC GGATAGATAA GCGCAAAGAA GAAGTTATGG TTACGATAGA GTCAGGGGAA 360
TATTTAGAAG GTGATGATTG CACAGTAGGT AATTGGTTTT CTGATGTCAG TAGTAAAAGG 420
AAAGACAAGC GACAAGTAGA ACTTGAAGAA GATGAGGAAT GGGAAGAAGA ACTTCGACTG 480
TGTTGTAAGA TCAAGGCAAC ATCGTCACGA AGCAGAACCC GCAATTTAAG TTCTAACAGT 540
CCTGAAAATG TTACTGATGT TAGTCCTTCT CGTTCACGGT CTCCAGCTTC TGATGTATCA 600
GATTCCATTC TGAAAAATGG GATATCTAAT GAATCGAAAG AAGGTGGCCC AATTTGTCAT 660
CAGTGCTTGA AAGGAGAAAG GATAACTCTT CTCATTTGCA GTGAATGTGA AGAGACGATG 720
TATTGTCTTA AATGTATAAG GAAATGGTAT CCACATCTAT CTGAGGATGA TGTTGTTGAA 780
AAATGTCCTT TCTGCCGCCA AAATTGTAAT TGCAGTAAAT GCTTGCATTT GAACGGTTTA 840
ATCGAGACAT CGAAGAGGGA ACTCGCGAAT TGTGAAAGAC GTCGTCATCT CCAGTACTTG 900
GTTACATTGA TGCTTCCTTT TCTGAATAAG TTATCCAAAT TCCAGAAGCA AGAGATTGAG 960
TTTGAGGCAA AGGTTCAAGG ATTACTGCCT TCCGAAGTTA AAATAACTGA GACAATAAAC 1020
TACACTGATG AACGTGTATA CTGTGATCAT TGTGCAACTT CAATTGAGGA CTTGCACCGA 1080
AGCTGCCCAA AGTGCTCTTA TGAACTATGT TTAAAGTGCT GTCAAGAGAT TCGTGAAGGA 1140
TCGCTTTCTG AACGCCCTGA AATGAAGTCA CATTATGTTG ATAGAGGATA TCGATATATG 1200
CATGGTTTAG ATACCGCGGA ACCAGGCTCC TCTTCCACTT CTGAAGACGA AGAAGCTAAC 1260
CCATCCGACG CTAAGTGGAA CTTTGGTGAT AATGGAAGCA TCACTTGTGC ACCAGAAAAT 1320
CTAGGTGGTT GTGGTGATTG TGTGTTAGAG CTTAAGCGGA TCCTACCACT GACGTTGATG 1380
TCAGACTTAG AGCACAAAGC AGAGACTTTC TTGTCATCAT ACAATATTAG CCCTAGAATG 1440
TTGAACTGTA GATGTTCTTC TTTAGAGACC GAGATGACAA GGAAAGCAGC TTCAAGGACA 1500
AAATCGAGTG ACAACTACCT TTTCTGTCCT GAATCTCTTG GTGTCTTGAA GGAAGAAGGG 1560
CTTCTTCATT TTCAAGAGCA TTGGGCAAAA GGCGAACCAG TAATCGTCAG GAACACTCTT 1620
GACAACACAC CTGGTTTAAG CTGGGAGCCG ATGGTTATGT GGCGGGCTTT ATGCGAAAAT 1680
GTGAATTCAA CAGCAAGCTC TCAGATGTCC CAAGTCAAAG CAATTGATTG CTTAGCTAAT 1740
TGTGAGGTGG AGATCAATAC TCGTCATTTC TTTGAAGGTT ATAGCAAAGG AAGAACATAT 1800
GAAAACTTCT GGCCTGAGAT GTTGAAGCTG AAGGACTGGC CTCCTTCTGA TAAGTTTGAA 1860
GATCTTTTAC CTCGTCATTG TGATGAGTTC ATATCCGCGT TACCTTTCCA AGAATATAGC 1920
AATCCTAGAA CCGGAATTCT TAACATTGCG ACAAAGCTTC CTGAAGGATT TATCAAACCA 1980
GATTTGGGTC CAAAAACTTA CATTGCTTAT GGGATTCCAG ATGAGCTTGG TAGAGGCGAT 2040
TCTATGACTA AGCTTCACTG CGATATGTCA GACGCGGTGA ATATTCTGAC GCATACGGCC 2100
GAAGTAACCC TAAGTCAAGA ACAAATATCC GCAGTCAAAG CACTGAAACA GAAACACAAG 2160
CAACAGAACA TGTTTGATAA ACAGAGCACT GAATTCTGTA GCGAAGAGGT AGAAGAATTG 2220
AACATGCCAG AGATTTTGAG CAATGAAAAT GACGAAACAG GCAGTGCTCT TTGGGACATA 2280
TTTAGGAGAG AAGATGTTCC TAAGTTAGAA GAGTATCTAA GAAAGTATTG CAAAGAATTT 2340
AGACACACTT ATTGTTGTCC AGTTACAAAG GTTTATCATC CGATACATGA CCAAACATGC 2400
TATTTAACCT TAGAGCACAA AAGAAAACTC AAGGCAGAAT TTGGGATCGA GCCATGGACA 2460
TTTGTGCAAA AGCTAGGTGA AGCAGTGTTT ATTCCTGCGG GTTGTCCTCA TCAAGTTCGG 2520
AATCTAAAAT CGTGCACAAA AGTCGCAGTT GACTTTGTGT CACCAGAGAA CATCCATGAG 2580
TGTCTGCGTC TGACCGAAGA GTTTCGCCAA CTTCCCAAGA ACCACAAGGC CAGAGAGGAC 2640
AAACTTGAGG CAAGTCTTTT ATCTCTTTAT CTTATCTATC CTTTTGACTT TGTTGGTTGT 2700
GATCATATTG CATATTTGCT TATGCGGTGG GGTTTGTTTT CGGGATATCT GAATTCAATT 2760
AGGAGAGATG GGCAATTGAA CCAAACCAAA ACCTAG 2797
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Art-0023 AT1G62310.1 Arabidopsis thaliana 85 0.0 1440
WERAM-Brr-0135 Bra027055.1-P Brassica rapa 74 0.0 1189
WERAM-Bro-0174 Bo9g038630.1 Brassica oleracea 72 0.0 1184
WERAM-Thc-0081 EOY28779 Theobroma cacao 61 0.0 881
WERAM-Prp-0037 EMJ15852 Prunus persica 59 0.0 843
WERAM-Sot-0046 PGSC0003DMT400042379 Solanum tuberosum 58 0.0 840
WERAM-Glm-0083 GLYMA07G39310.2 Glycine max 58 0.0 830
WERAM-Sol-0029 Solyc02g081010.1.1 Solanum lycopersicum 59 0.0 827
WERAM-Viv-0067 VIT_10s0116g00960.t01 Vitis vinifera 57 0.0 821
WERAM-Met-0115 AES92666 Medicago truncatula 56 0.0 789
WERAM-Pot-0042 POPTR_0004s00770.1 Populus trichocarpa 57 0.0 768
WERAM-Zem-0137 GRMZM2G417089_P01 Zea mays 47 0.0 683
WERAM-Sei-0128 Si034182m Setaria italica 48 0.0 652
WERAM-Sob-0006 Sb01g015210.1 Sorghum bicolor 47 0.0 650
WERAM-Tra-0176 Traes_5AL_C9FC195D1.2 Triticum aestivum 50 5e-178 622
WERAM-Orl-0059 KN539156.1_FGP008 Oryza longistaminata 52 8e-178 621
WERAM-Orgl-0100 OGLUM09G09380.1 Oryza glumaepatula 52 1e-177 621
WERAM-Orr-0107 ORUFI09G09860.1 Oryza rufipogon 52 6e-177 619
WERAM-Ori-0112 BGIOSGA030706-PA Oryza indica 53 2e-176 617
WERAM-Aet-0048 EMT13865 Aegilops tauschii 51 5e-176 615
WERAM-Orbr-0109 OB09G15930.1 Oryza brachyantha 53 2e-174 610
WERAM-Lep-0100 LPERR09G06290.1 Leersia perrieri 46 5e-168 589
WERAM-Orp-0097 OPUNC09G07740.1 Oryza punctata 47 3e-166 583
WERAM-Php-0022 PP1S144_17V6.1 Physcomitrella patens 42 2e-162 570
WERAM-Tru-0042 TRIUR3_19853-P1 Triticum urartu 54 1e-161 567
WERAM-Orm-0094 OMERI09G07170.1 Oryza meridionalis 44 4e-157 553
WERAM-Orb-0104 OBART09G09130.1 Oryza barthii 44 2e-156 550
WERAM-Orni-0101 ONIVA09G08110.1 Oryza nivara 50 2e-154 544
WERAM-Brd-0109 BRADI4G29617.1 Brachypodium distachyon 57 8e-141 498
WERAM-Amt-0068 ERN16983 Amborella trichopoda 37 3e-140 497
WERAM-Mua-0068 GSMUA_Achr4P05350_001 Musa acuminata 47 1e-137 488
WERAM-Org-0037 ORGLA03G0207400.1 Oryza glaberrima 45 3e-137 486
WERAM-Ors-0092 OS09T0393200-01 Oryza sativa 61 3e-134 477
WERAM-Hov-0012 MLOC_12624.1 Hordeum vulgare 43 1e-130 465
WERAM-Asm-0165 ENSAMXP00000016507.1 Astyanax mexicanus 37 6e-60 230
WERAM-Orn-0157 ENSONIP00000016309.1 Oreochromis niloticus 37 7e-60 229
WERAM-Orla-0053 ENSORLP00000006841.1 Oryzias latipes 36 8e-60 229
WERAM-Leo-0085 ENSLOCP00000011676.1 Lepisosteus oculatus 36 1e-59 229
WERAM-Pof-0098 ENSPFOP00000008824.2 Poecilia formosa 37 2e-59 228
WERAM-Xim-0102 ENSXMAP00000009010.1 Xiphophorus maculatus 38 3e-59 228
WERAM-Tar-0009 ENSTRUP00000002076.1 Takifugu rubripes 36 3e-59 228
WERAM-Gaa-0189 ENSGACP00000023958.1 Gasterosteus aculeatus 36 3e-59 228
WERAM-Dar-0145 ENSDARP00000084278.5 Danio rerio 37 6e-59 226
WERAM-Sah-0129 ENSSHAP00000013821.1 Sarcophilus harrisii 36 6e-59 226
WERAM-Pem-0063 ENSPMAP00000006992.1 Petromyzon marinus 35 7e-59 226
WERAM-Lac-0170 ENSLACP00000020024.1 Latimeria chalumnae 37 7e-59 226
WERAM-Mod-0100 ENSMODP00000015209.4 Monodelphis domestica 36 7e-59 226
WERAM-Gam-0008 ENSGMOP00000000972.1 Gadus morhua 37 1e-58 226
WERAM-Cap-0028 ENSCPOP00000002138.2 Cavia porcellus 35 1e-58 225
WERAM-Fec-0021 ENSFCAP00000001589.3 Felis catus 35 2e-58 225
WERAM-Orc-0080 ENSOCUP00000007280.2 Oryctolagus cuniculus 36 2e-58 224
WERAM-Mup-0101 ENSMPUP00000009333.1 Mustela putorius furo 36 2e-58 224
WERAM-Dan-0091 ENSDNOP00000009144.3 Dasypus novemcinctus 36 2e-58 224
WERAM-Aim-0189 ENSAMEP00000017468.1 Ailuropoda melanoleuca 36 2e-58 224
WERAM-Nol-0092 ENSNLEP00000010895.1 Nomascus leucogenys 35 2e-58 224
WERAM-Loa-0020 ENSLAFP00000001269.3 Loxodonta africana 36 3e-58 224
WERAM-Gog-0012 ENSGGOP00000000822.2 Gorilla gorilla 35 3e-58 224
WERAM-Ova-0174 ENSOARP00000017606.1 Ovis aries 35 3e-58 224
WERAM-Pat-0141 ENSPTRP00000029560.2 Pan troglodytes 35 3e-58 224
WERAM-Hos-0102 ENSP00000326563.5 Homo sapiens 35 3e-58 224
WERAM-Caf-0016 ENSCAFP00000001774.3 Canis familiaris 36 3e-58 224
WERAM-Otg-0093 ENSOGAP00000008081.2 Otolemur garnettii 36 3e-58 224
WERAM-Poa-0141 ENSPPYP00000017696.1 Pongo abelii 35 3e-58 224
WERAM-Bot-0099 ENSBTAP00000013278.4 Bos taurus 35 3e-58 224
WERAM-Mim-0018 ENSMICP00000001555.1 Microcebus murinus 35 3e-58 224
WERAM-Sus-0108 ENSSSCP00000015245.2 Sus scrofa 36 3e-58 224
WERAM-Ptv-0087 ENSPVAP00000007885.1 Pteropus vampyrus 35 3e-58 224
WERAM-Myl-0184 ENSMLUP00000015336.2 Myotis lucifugus 36 3e-58 224
WERAM-Eqc-0143 ENSECAP00000015928.1 Equus caballus 35 3e-58 224
WERAM-Paa-0043 ENSPANP00000002578.1 Papio anubis 36 4e-58 224
WERAM-Mam-0003 ENSMMUP00000000618.2 Macaca mulatta 36 4e-58 224
WERAM-Chs-0157 ENSCSAP00000009298.1 Chlorocebus sabaeus 35 4e-58 224
WERAM-Meg-0102 ENSMGAP00000010078.1 Meleagris gallopavo 36 4e-58 224
WERAM-Mum-0157 ENSMUSP00000037628.7 Mus musculus 35 4e-58 224
WERAM-Gaga-0080 ENSGALP00000012399.4 Gallus gallus 35 5e-58 223
WERAM-Mae-0023 ENSMEUP00000001666.1 Macropus eugenii 35 5e-58 223
WERAM-Tag-0001 ENSTGUP00000000018.1 Taeniopygia guttata 36 6e-58 223
WERAM-Anc-0075 ENSACAP00000007027.2 Anolis carolinensis 35 1e-57 223
WERAM-Caj-0074 ENSCJAP00000012191.1 Callithrix jacchus 35 1e-57 222
WERAM-Anp-0111 ENSAPLP00000012780.1 Anas platyrhynchos 35 1e-57 222
WERAM-Fia-0049 ENSFALP00000003539.1 Ficedula albicollis 35 1e-57 222
WERAM-Ran-0218 ENSRNOP00000067649.2 Rattus norvegicus 35 2e-57 222
Created Date 25-Jun-2016