WERAM Information

Tag Content
WERAM ID WERAM-Art-0113
Ensembl Protein ID AT4G39100.1
Gene Name SHL1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT4G39100 AT4G39100.1 AT4G39100.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.10e-10 42.3 140 188
Organism Arabidopsis thaliana
Domain Profile
  Me_Reader PHD
      PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                   +C  C+ +++ ++ mvqC+eC++wfH +C++ + +++++++++yC++C 
  AT4G39100.1 140 VFCK-CEMPYNPDDLMVQCEECSEWFHPSCIGTTIEEAKKPDNFYCEECS 188
                  5899.*877777778*******************999999989******7 PP
Protein Sequence
(Fasta)		MPKQKAPRKQ LKSYKLKHIN KSIQEGDAVL MRSSEPGKPS YVARVEAIET DARGSHAKVR 60
VRWYYRPEES IGGRRQFHGA KEVFLSDHFD FQSADTIEGK CKVHSFSSYT KLDSVGNDDF 120
FCRFEYNSTT GAFDPDRVTV FCKCEMPYNP DDLMVQCEEC SEWFHPSCIG TTIEEAKKPD 180
NFYCEECSPQ QQNLHNSNST SNNRDAKVNG KRSLEVTKSK NKHTKRPG 228
Nucleotide Sequence
(Fasta)		AATCATACGC TCCTGAGATC CTCATGACTT GTTCTTACCG TACTCCGCGA GACATGCGAT 60
TGATGATTCT TGACTGTATT CATTGAGAAA AACTGTTCGC AAAAACCTTG AGCTTCATCA 120
TCGTCCATTA CTCACCTTTC AGTTTCAGAT GCCCAAGCAA AAAGCTCCAA GGAAGCAGCT 180
CAAGTCCTAT AAACTCAAAC ACATCAACAA GAGTATTCAA GAGGGAGATG CTGTGTTGAT 240
GCGGTCGTCG GAGCCTGGAA AACCGTCGTA CGTAGCGAGG GTAGAGGCGA TCGAGACGGA 300
CGCGCGTGGA TCGCACGCGA AAGTTCGTGT GAGGTGGTAT TATCGCCCTG AGGAATCTAT 360
CGGAGGGAGG AGACAATTCC ATGGAGCCAA GGAGGTTTTT CTCTCTGACC ACTTCGATTT 420
TCAAAGCGCC GATACGATTG AAGGAAAGTG TAAGGTTCAC AGTTTCAGTA GCTACACCAA 480
ACTTGACTCT GTTGGAAACG ACGACTTCTT CTGTCGTTTC GAGTACAATT CCACTACCGG 540
CGCGTTTGAT CCTGACAGAG TCACCGTGTT CTGCAAGTGT GAGATGCCGT ATAACCCAGA 600
TGACTTGATG GTGCAATGCG AGGAGTGTTC TGAGTGGTTT CATCCTTCTT GTATAGGAAC 660
AACAATAGAG GAAGCTAAAA AGCCAGATAA CTTCTACTGC GAAGAGTGTT CCCCACAACA 720
GCAGAATTTG CACAACTCTA ATTCAACTTC CAATAACAGA GATGCTAAGG TGAATGGAAA 780
GCGCAGCCTG GAGGTAACTA AATCGAAGAA CAAACACACT AAGCGACCAG GTTAACATAA 840
ACTTGTAAAG GCTATAGATA TCTGGTTGGT GAGTCTGAGT ATCAATCGTG TAATCTACAA 900
AGGTGGTTTT GTTTTCTTTC CCTCTCTAGT TTTTTCTTTC TTAAAAAATG AGGGTTTAGG 960
TTTGTTGGCT TGATTGTTGT ATAATTTATA TGTATAGCGT ATGGTGGTTT CTCATCTCCT 1020
TTAGTTGTCA CATATAAAAT TTGGGTAAAA TGGTTTGTTT ATAATAAGAA AACAAAACAA 1080
ACAAACAAAC AAAGAGAGTG TTGGTTCCTT ATTTGTTTGT TTTCATTGTG AACTCTAGAA 1140
ACCCTTCATT CTTTATTAGT TTTTCATTCT TTATTAATTC TAAAACGCAT ATTC 1195
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Arl-0103 fgenesh2_kg.7__ 111__ AT4G39100.1 Arabidopsis lyrata 97 2e-132 468
WERAM-Brr-0057 Bra010705.1-P Brassica rapa 88 8e-114 406
WERAM-Bro-0061 Bo3g149870.1 Brassica oleracea 87 2e-113 405
WERAM-Glm-0054 GLYMA06G01180.1 Glycine max 72 2e-93 338
WERAM-Thc-0022 EOX97912 Theobroma cacao 73 4e-93 337
WERAM-Met-0082 AES74236 Medicago truncatula 70 3e-90 328
WERAM-Prp-0088 EMJ01661 Prunus persica 70 1e-89 326
WERAM-Pot-0047 POPTR_0004s16700.1 Populus trichocarpa 70 8e-89 323
WERAM-Viv-0010 VIT_03s0038g00160.t01 Vitis vinifera 70 1e-88 322
WERAM-Sol-0022 Solyc01g110020.2.1 Solanum lycopersicum 68 3e-87 318
WERAM-Sot-0093 PGSC0003DMT400079501 Solanum tuberosum 67 2e-84 309
WERAM-Orni-0072 ONIVA07G04420.1 Oryza nivara 64 2e-81 299
WERAM-Orm-0053 OMERI05G17820.1 Oryza meridionalis 64 2e-81 299
WERAM-Orb-0072 OBART07G05590.1 Oryza barthii 61 6e-81 297
WERAM-Ors-0065 OS07T0186400-01 Oryza sativa 63 8e-81 296
WERAM-Ori-0083 BGIOSGA025290-PA Oryza indica 63 8e-81 296
WERAM-Sob-0018 Sb02g004890.1 Sorghum bicolor 63 1e-80 296
WERAM-Lep-0072 LPERR07G04960.1 Leersia perrieri 65 4e-80 294
WERAM-Sei-0120 Si031067m Setaria italica 62 8e-80 293
WERAM-Zem-0061 GRMZM2G097726_P02 Zea mays 63 1e-79 293
WERAM-Brd-0029 BRADI1G55090.1 Brachypodium distachyon 63 6e-79 290
WERAM-Sem-0075 EFJ26805 Selaginella moellendorffii 61 7e-79 290
WERAM-Mua-0144 GSMUA_Achr9P25510_001 Musa acuminata 63 2e-78 289
WERAM-Orgl-0099 OGLUM09G09260.1 Oryza glumaepatula 64 7e-78 287
WERAM-Orp-0096 OPUNC09G07570.1 Oryza punctata 65 2e-77 285
WERAM-Orl-0035 KN538829.1_FGP032 Oryza longistaminata 65 2e-77 285
WERAM-Orr-0106 ORUFI09G09520.1 Oryza rufipogon 64 3e-77 285
WERAM-Amt-0094 ERM95501 Amborella trichopoda 64 8e-77 283
WERAM-Orbr-0081 OB07G14170.1 Oryza brachyantha 69 2e-76 282
WERAM-Org-0073 ORGLA07G0046800.1 Oryza glaberrima 67 1e-75 279
WERAM-Php-0116 PP1S56_182V6.1 Physcomitrella patens 62 2e-75 278
WERAM-Tra-0227 Traes_5DL_7A53FE80E.1 Triticum aestivum 66 2e-74 275
WERAM-Hov-0101 MLOC_71907.1 Hordeum vulgare 60 2e-72 269
WERAM-Aet-0060 EMT02157 Aegilops tauschii 66 5e-70 261
WERAM-Tru-0056 TRIUR3_22993-P1 Triticum urartu 52 3e-51 198
WERAM-Chr-0035 EDO98852 Chlamydomonas reinhardtii 43 2e-41 166
WERAM-Osl-0033 ABO95088 Ostreococcus lucimarinus 45 3e-40 162
WERAM-Prc-0121 ENSPCAP00000010850.1 Procavia capensis 34 5e-10 62.0
WERAM-Dar-0045 ENSDARP00000045941.6 Danio rerio 34 5e-10 61.6
WERAM-Mum-0151 ENSMUSP00000047308.7 Mus musculus 31 2e-09 59.7
WERAM-Hos-0232 ENSP00000352185.4 Homo sapiens 42 2e-09 59.7
WERAM-Tut-0051 ENSTTRP00000004269.1 Tursiops truncatus 42 3e-09 59.3
WERAM-Pat-0177 ENSPTRP00000036115.5 Pan troglodytes 42 3e-09 59.3
WERAM-Tag-0055 ENSTGUP00000003831.1 Taeniopygia guttata 42 3e-09 59.3
WERAM-Gaga-0056 ENSGALP00000008273.4 Gallus gallus 42 3e-09 58.9
WERAM-Fia-0091 ENSFALP00000007322.1 Ficedula albicollis 42 4e-09 58.9
WERAM-Asm-0033 ENSAMXP00000004557.1 Astyanax mexicanus 31 4e-09 58.9
WERAM-Cap-0130 ENSCPOP00000010443.2 Cavia porcellus 40 5e-09 58.5
WERAM-Tas-0113 ENSTSYP00000011554.1 Tarsius syrichta 40 5e-09 58.5
WERAM-Cae-0039 F26H11.2a Caenorhabditis elegans 28 5e-09 58.5
WERAM-Lac-0125 ENSLACP00000014816.1 Latimeria chalumnae 40 6e-09 58.2
WERAM-Xet-0141 ENSXETP00000047696.4 Xenopus tropicalis 40 6e-09 58.2
WERAM-Myl-0006 ENSMLUP00000000462.2 Myotis lucifugus 34 6e-09 58.2
WERAM-Mam-0070 ENSMMUP00000011473.2 Macaca mulatta 34 6e-09 58.2
WERAM-Ran-0162 ENSRNOP00000032833.4 Rattus norvegicus 42 6e-09 58.2
WERAM-Poa-0198 ENSPPYP00000022810.2 Pongo abelii 40 6e-09 58.2
WERAM-Gog-0162 ENSGGOP00000014352.2 Gorilla gorilla 40 7e-09 58.2
WERAM-Vip-0022 ENSVPAP00000002066.1 Vicugna pacos 40 7e-09 58.2
WERAM-Caf-0169 ENSCAFP00000024137.2 Canis familiaris 40 7e-09 58.2
WERAM-Pof-0120 ENSPFOP00000010415.2 Poecilia formosa 38 7e-09 58.2
WERAM-Nol-0174 ENSNLEP00000019631.2 Nomascus leucogenys 40 7e-09 58.2
WERAM-Fec-0005 ENSFCAP00000000567.3 Felis catus 40 7e-09 57.8
WERAM-Xim-0128 ENSXMAP00000010848.1 Xiphophorus maculatus 38 7e-09 57.8
WERAM-Ptv-0061 ENSPVAP00000006309.1 Pteropus vampyrus 40 7e-09 57.8
WERAM-Eqc-0214 ENSECAP00000022798.1 Equus caballus 40 8e-09 57.8
WERAM-Ova-0070 ENSOARP00000007621.1 Ovis aries 40 8e-09 57.8
WERAM-Chs-0149 ENSCSAP00000008671.1 Chlorocebus sabaeus 40 8e-09 57.8
WERAM-Mup-0130 ENSMPUP00000011455.1 Mustela putorius furo 40 8e-09 57.8
WERAM-Paa-0022 ENSPANP00000018377.1 Papio anubis 40 8e-09 57.8
WERAM-Orc-0019 ENSOCUP00000002278.2 Oryctolagus cuniculus 40 8e-09 57.8
WERAM-Anc-0006 ENSACAP00000000777.3 Anolis carolinensis 40 9e-09 57.8
WERAM-Ect-0006 ENSETEP00000000305.1 Echinops telfairi 40 9e-09 57.8
WERAM-Otg-0029 ENSOGAP00000001922.2 Otolemur garnettii 40 1e-08 57.4
WERAM-Aim-0075 ENSAMEP00000006562.1 Ailuropoda melanoleuca 40 1e-08 57.4
WERAM-Loa-0154 ENSLAFP00000013594.3 Loxodonta africana 40 1e-08 57.4
WERAM-Tar-0040 ENSTRUP00000009774.1 Takifugu rubripes 38 1e-08 57.4
WERAM-Ten-0078 ENSTNIP00000009506.1 Tetraodon nigroviridis 38 1e-08 57.4
WERAM-Ora-0007 ENSOANP00000001114.1 Ornithorhynchus anatinus 40 1e-08 57.4
WERAM-Orla-0139 ENSORLP00000016307.1 Oryzias latipes 38 1e-08 57.0
WERAM-Orn-0143 ENSONIP00000015119.1 Oreochromis niloticus 38 1e-08 57.0
WERAM-Mod-0187 ENSMODP00000026122.3 Monodelphis domestica 34 2e-08 57.0
WERAM-Gam-0086 ENSGMOP00000008905.1 Gadus morhua 38 2e-08 56.6
WERAM-Leo-0136 ENSLOCP00000016741.1 Lepisosteus oculatus 37 2e-08 56.6
WERAM-Gaa-0089 ENSGACP00000011590.1 Gasterosteus aculeatus 36 3e-08 55.8
WERAM-Sus-0122 ENSSSCP00000017483.2 Sus scrofa 34 4e-08 55.5
WERAM-Sah-0039 ENSSHAP00000004512.1 Sarcophilus harrisii 38 5e-08 55.5
WERAM-Scs-0034 EDO00416 Sclerotinia sclerotiorum 24 7e-08 54.7
WERAM-Caj-0235 ENSCJAP00000050740.1 Callithrix jacchus 40 1e-07 53.5
WERAM-Drm-0002 FBpp0072421 Drosophila melanogaster 36 2e-07 53.5
WERAM-Dan-0075 ENSDNOP00000007530.3 Dasypus novemcinctus 37 3e-07 52.8
WERAM-Crn-0026 AAW44599 Cryptococcus neoformans 37 4e-07 52.4
WERAM-Kll-0022 CAG99888 Kluyveromyces lactis 37 5e-07 52.0
WERAM-Cag-0004 CAG57994 Candida glabrata 27 6e-07 51.6
WERAM-Tum-0002 CAZ79493 Tuber melanosporum 43 6e-07 51.6
WERAM-Asg-0025 AAS53448 Ashbya gossypii 38 7e-07 51.2
WERAM-Zyt-0005 Mycgr3P108842 Zymoseptoria tritici 42 8e-07 51.2
WERAM-Ved-0001 EGY13650 Verticillium dahliae 26 1e-06 50.8
WERAM-Pem-0097 ENSPMAP00000010124.1 Petromyzon marinus 35 1e-06 50.8
WERAM-Spr-0013 CBQ68026 Sporisorium reilianum 43 1e-06 50.4
Created Date 25-Jun-2016