Astyanax mexicanus      Ac_Reader      Bromodomain

※ Bromodomain family introduction

    Bromodomain: Bromodomains (BRDs) are protein interaction modules that exclusively recognize acetylation motifs. BRDs are evolutionarily conserved and present in diverse nuclear proteins comprising HATs (GCN5, PCAF), ATP-dependent chromatin-remodeling complexes (BAZ1B), helicases (SMARCA), methyltransferases (MLL, ASH1L), transcriptional coactivators (TRIM/TIF1, TAFs) transcriptional mediators (TAF1), nuclear-scaffolding proteins(PB1), and the BET family. Despite large sequence variations, all BRD modules share a conserved fold that comprises a left-handed bundle of four a helices, linked by loop regions of variablelength, which line the Kac binding site and determine binding specificity. (1)

Reference
1. P. Filippakopoulos, S. Picaud, M. Mangos, T. Keates, J.P. Lambert, D. Barsyte-Lovejoy, I. Felletar, R. Volkmer, S. Müller, T. Pawson,et al.Histone recognition and large-scale structural analysis of the human bromodomain family. Cell.2012;149(1):214-231. PMID: 22464331.



There are 49 genes.  Reviewed (0 or Unreviewed (49

No.StatusWERAM IDGene/Alias Name
1
WERAM-Asm-0003
kat2a
2
WERAM-Asm-0006
brd1b
3
WERAM-Asm-0009
4
WERAM-Asm-0016
baz2a
5
WERAM-Asm-0024
im:6907928
6
WERAM-Asm-0029
BRPF1
7
WERAM-Asm-0032
phip (1 to many)
8
WERAM-Asm-0034
bptf
9
WERAM-Asm-0036
baz2ba
10
WERAM-Asm-0041
zmynd11
11
WERAM-Asm-0043
si:ch211-59d17.3
12
WERAM-Asm-0058
brd3a
13
WERAM-Asm-0063
zmynd8
14
WERAM-Asm-0067
brwd3
15
WERAM-Asm-0070
ep300a
16
WERAM-Asm-0072
taf1
17
WERAM-Asm-0076
brd3b
18
WERAM-Asm-0098
BAZ2B (1 to many)
19
WERAM-Asm-0099
ash1l
20
WERAM-Asm-0116
SMARCA4 (1 to many)
21
WERAM-Asm-0122
22
WERAM-Asm-0123
BRD4 (1 to many)
23
WERAM-Asm-0124
brd9
24
WERAM-Asm-0126
brpf3b
25
WERAM-Asm-0127
brwd1
26
WERAM-Asm-0128
trim33
27
WERAM-Asm-0129
smarca2
28
WERAM-Asm-0134
si:dkey-226m8.10
29
WERAM-Asm-0141
cecr2
30
WERAM-Asm-0148
ep300b
31
WERAM-Asm-0150
brd2a
32
WERAM-Asm-0154
kat2b
33
WERAM-Asm-0158
BPTF (1 to many)
34
WERAM-Asm-0168
35
WERAM-Asm-0169
atad2
36
WERAM-Asm-0174
brdt
37
WERAM-Asm-0176
pbrm1l
38
WERAM-Asm-0179
prkcbp1l
39
WERAM-Asm-0180
brd2b
40
WERAM-Asm-0182
atad2b
41
WERAM-Asm-0183
PBRM1 (1 to many)
42
WERAM-Asm-0185
brd1a
43
WERAM-Asm-0187
baz1b
44
WERAM-Asm-0188
brd4
45
WERAM-Asm-0192
trim24
46
WERAM-Asm-0198
KIAA2026
47
WERAM-Asm-0206
brd8
48
WERAM-Asm-0207
brd7
49
WERAM-Asm-0224
smarca4a