WERAM Information

Tag Content
WERAM ID WERAM-Sol-0040
Ensembl Protein ID Solyc03g005170.2.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Solyc03g005170.2 Solyc03g005170.2.1 Solyc03g005170.2.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 5.50e-09 36.8 662 741
Organism Solanum lycopersicum
Domain Profile
  Me_Reader PHD
             PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                         ++C +C  d+ +   +++Cd+C+  fH++C++++   lp g  w+CpsC+
  Solyc03g005170.2.1 662 DVCGIC-GDGGD---LICCDGCPSTFHQSCLGIQ--ILPTG-LWHCPSCT 704
                         68****.44444...9******************..9****.*******8 PP
             PHD.txt   4 ClvCgkddegeke........mvqCdeCddwfHlkCv 32 
                         C +Cg ++ +  e        ++ C+ C++ +H +C 
  Solyc03g005170.2.1 705 CKFCGAASRNPAEdsetvvheFLSCSLCEKKYHKSCS 741
                         999975555522234567777999************5 PP
Protein Sequence
(Fasta)		MEDSVRSGGG VLKKKSSSGC LIIKRKDDRL GIGGISSSGA SQKVKNRPKL VMNEYESSEE 60
ISESIQRKNG QVFSNGSVFY GRSGVRDGEF GRNMNLSNFN KHEECDTKMQ SNVYGDDRFN 120
MVERRGGSRE FGTESTSVMV EKRKLSYMDI SSSFSGSRSK GDGGGFKRRC GLLDDGVHMP 180
MSLPREASHE SIRLQGKNGV LKVMVNKKKI DFRPKEYDPV EIEGRKGSSS ADVVKRNFQV 240
RPSFYWGPKR PEKQPLLFQT EGNELKPQKP LSGKSTHLVA SEKDETDTSL KLAPPSLQPA 300
SSAMCVLKEE SRPLASEDVT PAKRKDGKVN RGGSTEKQKL RERIRGMLIE AGWTIDYRPR 360
KNREYLDAVY INPSGTAYWS IIKAYEAFQK RSEVDSGKSK PDGSSCSFAP ISDDLINKLT 420
RQTRKKIEKE MKKKRKDDDQ RQDPKQTFVN ESVLGICSDQ REKKFNNYIM KTDKLLQGKL 480
HASDQESGDN SSDNSLKVRR LVQDMAGKAS VGVASNSIHG RRSKLIGRCT LLARHSDKGE 540
YSDSDGYVPY TGKRTLLSWL IDSGILKLRQ KIQYVNRRKT TVKLEGWITQ DGVHCGCCSK 600
ILPVSRFELH AGSKRHQPFQ NIVLESGASL LECLVDAWNQ QKESDRQNFY NIDIDGDDGE 660
DDVCGICGDG GDLICCDGCP STFHQSCLGI QILPTGLWHC PSCTCKFCGA ASRNPAEDSE 720
TVVHEFLSCS LCEKKYHKSC SLEMNALPAI SNNPSGTFCE QKCQELYDHL QNILGVKHEL 780
EAGFSWSLIQ RTDLDSDTSH YPFPQRVECN SKLAVALAVM DECFVPIVDR RSGINIIHNV 840
LYNTGSNLSR LNFRGFYTAI LERGDDIISA ASIRIRGTQL AEMPFIGTRN IYRQQGMCRR 900
LFDAIETVLS TLKVEKLIIP AISEHLHTWA KVFGFDELEE SNKQEMKSIS MLVFPGTNML 960
QKKILKKDVQ EACVLQQSHP PSPVLVEKTD QESSLRRGGH LHDGVCVNIV EKPDDRLGPM 1020
DSDSPVSAIQ LSDSSVVRAE GGCCKSDTQV SSKEVEKNFA ESATKWMLSS PPYGTSDSRP 1080
DTEDAALGPG NIVNSGIEPI NVKV 1104
Nucleotide Sequence
(Fasta)		TATTCTTTTT ACCTTGTCCT TGTAGTTTTT GTTCTGTACT GAAGTCTGAA AATACAGCAG 60
GTGTCTGTTC ATATATACAA CTTCACCGAT TAAACAAACC AAATTTTCCG GCCATTAGCA 120
TCGCTTTCCG GTGAAATTGG CTAATCTCTA AGCTTTCCGG CCAGATCTGT TAAATGTTGA 180
ATAACTGAAG GTAGAATTTG GAGTTTCAAA AAAAATTTGG TAATTTTTTA ATGTTACTTT 240
GCGTGAGATT TTGAGATTGC ATTTTGTATT AACATAAGAA AATGGAGGAT AGTGTGAGAT 300
CAGGGGGTGG TGTATTGAAG AAAAAAAGCT CATCTGGCTG TTTAATTATT AAAAGGAAAG 360
ATGATAGGTT GGGCATAGGA GGGATCAGTT CTTCAGGGGC TTCACAGAAG GTGAAGAACA 420
GGCCTAAGTT GGTAATGAAT GAGTATGAGT CGAGTGAGGA GATATCAGAG TCAATTCAGC 480
GAAAAAATGG TCAAGTTTTT AGTAATGGTT CTGTTTTTTA TGGAAGAAGT GGTGTTAGAG 540
ATGGTGAATT TGGTAGAAAT ATGAATTTGT CCAATTTCAA CAAGCATGAA GAATGTGATA 600
CGAAAATGCA ATCGAATGTG TATGGTGATG ATAGATTTAA CATGGTTGAA AGAAGAGGGG 660
GTTCGAGAGA GTTTGGTACT GAGTCTACTA GTGTAATGGT TGAGAAGAGG AAGCTTTCAT 720
ATATGGATAT TTCAAGTAGT TTTTCCGGTA GTAGGTCAAA GGGAGATGGC GGTGGATTTA 780
AGAGAAGGTG TGGTTTATTA GACGATGGAG TGCATATGCC CATGTCATTG CCAAGAGAAG 840
CCTCTCATGA ATCAATCAGA TTGCAAGGGA AAAATGGGGT ATTAAAGGTT ATGGTGAATA 900
AGAAGAAGAT CGACTTCAGG CCCAAGGAAT ATGATCCTGT GGAAATTGAA GGTAGAAAAG 960
GTTCTTCGTC GGCAGATGTT GTCAAAAGGA ATTTTCAAGT CCGTCCATCC TTTTACTGGG 1020
GTCCTAAACG ACCTGAAAAG CAACCTTTGT TATTTCAAAC AGAGGGAAAT GAGCTGAAAC 1080
CGCAAAAACC TTTGTCGGGT AAAAGCACCC ATTTAGTGGC CTCTGAAAAA GATGAGACTG 1140
ATACGTCACT AAAGTTGGCA CCTCCTAGTT TGCAGCCTGC TAGCTCAGCA ATGTGTGTGC 1200
TGAAGGAAGA AAGCAGGCCG TTGGCGTCTG AAGATGTTAC CCCTGCTAAA AGAAAAGATG 1260
GGAAAGTGAA TCGAGGTGGG AGCACTGAGA AGCAGAAGTT GCGAGAACGA ATAAGAGGAA 1320
TGCTCATTGA AGCTGGATGG ACCATTGATT ATAGACCAAG AAAGAACAGA GAATATCTGG 1380
ATGCAGTGTA CATTAATCCT AGTGGAACAG CCTATTGGTC AATAATTAAG GCCTATGAAG 1440
CATTTCAAAA ACGATCTGAG GTAGATTCAG GTAAAAGCAA ACCTGATGGC AGCTCTTGTT 1500
CATTTGCTCC AATATCAGAT GATTTAATTA ATAAACTTAC CAGGCAAACA AGGAAAAAAA 1560
TTGAGAAAGA AATGAAAAAG AAAAGAAAAG ACGATGACCA GAGACAAGAT CCTAAACAGA 1620
CTTTTGTGAA TGAGTCTGTG TTGGGCATAT GCAGTGATCA GCGTGAGAAG AAGTTCAATA 1680
ACTATATAAT GAAGACAGAT AAGTTGCTGC AAGGAAAATT ACATGCATCA GACCAGGAGA 1740
GTGGGGATAA TTCAAGTGAT AACTCATTGA AGGTAAGGAG ACTTGTGCAG GATATGGCTG 1800
GAAAAGCATC TGTTGGAGTT GCTTCTAATT CAATACACGG AAGAAGAAGT AAATTAATTG 1860
GACGATGTAC ATTGCTGGCC CGTCATTCTG ACAAGGGGGA ATATTCAGAT AGTGATGGAT 1920
ATGTTCCATA TACTGGAAAA AGAACCTTGT TGTCCTGGTT GATTGACTCC GGAATATTAA 1980
AGTTGAGACA GAAGATTCAA TATGTGAACC GTAGAAAGAC AACAGTAAAA TTAGAAGGTT 2040
GGATCACACA AGATGGTGTC CACTGTGGTT GCTGTAGTAA AATCCTTCCA GTTTCAAGAT 2100
TTGAGCTCCA TGCAGGAAGT AAACGACATC AACCATTTCA AAACATTGTT TTAGAGTCTG 2160
GAGCTTCCTT ACTAGAGTGC TTGGTTGACG CATGGAATCA ACAGAAAGAG TCTGATCGCC 2220
AGAATTTCTA CAATATAGAC ATTGACGGTG ATGATGGTGA AGATGATGTT TGTGGTATTT 2280
GTGGTGATGG TGGTGACCTT ATCTGTTGTG ATGGTTGCCC ATCAACTTTT CATCAGAGCT 2340
GTCTAGGAAT ACAAATACTT CCTACTGGCC TTTGGCATTG TCCAAGTTGC ACTTGCAAAT 2400
TTTGTGGGGC TGCTAGTAGA AACCCTGCTG AGGATAGTGA GACAGTAGTC CACGAATTTC 2460
TTTCTTGCAG CCTCTGTGAG AAAAAATATC ATAAATCATG CAGTTTGGAG ATGAATGCTT 2520
TACCTGCTAT TTCCAATAAT CCATCTGGTA CATTTTGTGA GCAGAAATGC CAGGAGCTGT 2580
ATGACCATCT ACAGAACATT CTTGGTGTCA AACATGAACT TGAAGCAGGA TTCTCATGGT 2640
CCCTGATTCA AAGAACAGAT TTGGACTCAG ATACTTCTCA TTACCCCTTT CCTCAACGGG 2700
TGGAGTGCAA TTCTAAGCTA GCTGTTGCAC TGGCTGTTAT GGATGAATGT TTCGTACCCA 2760
TTGTCGACAG GAGAAGTGGG ATAAATATTA TTCACAACGT TCTCTACAAC ACTGGCTCAA 2820
ATTTAAGTCG GCTGAATTTC CGTGGCTTCT ACACTGCAAT TCTGGAAAGA GGTGATGACA 2880
TAATATCTGC TGCATCTATA AGGATCCGTG GAACTCAACT TGCAGAAATG CCATTCATTG 2940
GGACCAGGAA TATATATAGG CAGCAAGGGA TGTGTCGTAG ACTTTTTGAT GCTATTGAGA 3000
CAGTCCTCTC TACTTTAAAA GTTGAGAAGT TAATCATTCC TGCTATATCT GAGCATCTGC 3060
ATACTTGGGC CAAGGTTTTC GGATTCGATG AACTTGAGGA ATCAAACAAG CAAGAAATGA 3120
AATCCATCAG TATGTTGGTG TTTCCTGGTA CAAACATGTT ACAAAAGAAG ATACTGAAGA 3180
AAGATGTGCA AGAGGCTTGT GTGTTACAGC AAAGTCATCC TCCATCGCCT GTTTTGGTTG 3240
AAAAAACGGA TCAGGAATCA TCTCTCAGGC GTGGCGGACA TCTGCATGAT GGCGTATGTG 3300
TGAACATCGT CGAAAAACCT GATGACAGGT TAGGTCCAAT GGATTCTGAC TCTCCAGTTT 3360
CTGCCATTCA GCTAAGTGAT AGCAGTGTGG TTAGAGCAGA AGGTGGTTGT TGCAAGTCAG 3420
ACACCCAAGT TTCCAGTAAG GAGGTGGAGA AGAATTTTGC TGAATCAGCC ACAAAGTGGA 3480
TGCTCTCTTC TCCTCCATAT GGCACAAGTG ACAGCAGGCC TGATACTGAA GATGCAGCAC 3540
TAGGTCCTGG AAACATTGTC AACTCTGGTA TAGAGCCTAT CAATGTAAAA GTTTAGAAAG 3600
AAAATGCATT TGTCTTATAT AACACCCTGA TCTTGATTCA TAGCTGAAGT TTCTTCTGGG 3660
AACATGTCGG CAGTAAAATA GATTGAAGAT GCTTCTGATC GTTCTGTCCA CTAATAACAC 3720
CGGAAAGATA TTTGGGTGGT TTCTGTAGAT AGCTGTTTTC TAGACCCTGC TGTCCAAAGT 3780
GCTTGAAAAG AAGTCAGCAG CAATAGACAT ATACCTTGAC CCCCTGTGGA TTTGGTAAGG 3840
CCTTTACAGT CTTACTCAGT GTAATTAACC AAAGCATATA TGATGTGGTA ATGAGCTACA 3900
TGTGGCTCCA AAACAAGCTT C 3922
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Viv-0024 VIT_05s0020g03420.t01 Vitis vinifera 50 0.0 853
WERAM-Prp-0110 EMJ25684 Prunus persica 56 0.0 812
WERAM-Glm-0010 GLYMA01G44870.1 Glycine max 52 0.0 793
WERAM-Thc-0054 EOY05682 Theobroma cacao 51 0.0 786
WERAM-Met-0033 KEH43887 Medicago truncatula 49 0.0 758
WERAM-Art-0101 AT4G14920.1 Arabidopsis thaliana 48 0.0 657
WERAM-Bro-0088 Bo5g005570.1 Brassica oleracea 46 0.0 633
WERAM-Pot-0115 POPTR_0010s09810.1 Populus trichocarpa 49 4e-171 600
WERAM-Mua-0076 GSMUA_Achr4P21300_001 Musa acuminata 45 2e-163 574
WERAM-Orgl-0070 OGLUM07G04140.1 Oryza glumaepatula 42 6e-145 513
WERAM-Orni-0071 ONIVA07G03330.1 Oryza nivara 42 9e-145 512
WERAM-Org-0072 ORGLA07G0040300.1 Oryza glaberrima 42 1e-144 511
WERAM-Orm-0068 OMERI07G03260.1 Oryza meridionalis 42 2e-144 511
WERAM-Orl-0111 KN542919.1_FGP001 Oryza longistaminata 42 3e-144 510
WERAM-Orr-0074 ORUFI07G04440.1 Oryza rufipogon 42 3e-144 510
WERAM-Ori-0082 BGIOSGA025231-PA Oryza indica 42 2e-143 508
WERAM-Orp-0069 OPUNC07G04530.3 Oryza punctata 43 2e-140 497
WERAM-Lep-0071 LPERR07G04130.1 Leersia perrieri 42 3e-138 490
WERAM-Tru-0097 TRIUR3_33650-P1 Triticum urartu 41 1e-136 485
WERAM-Tra-0100 Traes_2DS_F7E8E6B22.1 Triticum aestivum 41 1e-135 481
WERAM-Aet-0042 EMT29012 Aegilops tauschii 41 3e-135 480
WERAM-Brr-0108 Bra020653.1-P Brassica rapa 57 1e-130 465
WERAM-Orbr-0080 OB07G13580.1 Oryza brachyantha 48 5e-125 446
WERAM-Sei-0098 Si028686m Setaria italica 48 4e-117 420
WERAM-Sob-0017 Sb02g004100.1 Sorghum bicolor 47 2e-114 411
WERAM-Amt-0036 ERN16161 Amborella trichopoda 50 8e-106 382
WERAM-Zem-0135 GRMZM2G412492_P01 Zea mays 48 8e-100 363
WERAM-Brd-0130 BRADI5G27517.1 Brachypodium distachyon 40 1e-86 319
WERAM-Orb-0048 OBART04G30730.1 Oryza barthii 40 2e-83 308
WERAM-Hov-0069 MLOC_5844.1 Hordeum vulgare 49 8e-83 306
WERAM-Sem-0001 EFJ24916 Selaginella moellendorffii 43 2e-81 301
WERAM-Sot-0081 PGSC0003DMT400067527 Solanum tuberosum 42 1e-80 299
WERAM-Arl-0059 fgenesh2_kg.3__ 1623__ AT3G14980.1 Arabidopsis lyrata 40 1e-78 292
WERAM-Php-0118 PP1S59_348V6.1 Physcomitrella patens 37 2e-77 288
WERAM-Ors-0046 OS04T0691700-01 Oryza sativa 43 1e-69 262
Created Date 25-Jun-2016