WERAM Information

Tag Content
WERAM ID WERAM-Sob-0107
Ensembl Protein ID Sb07g020680.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb07g020680 Sb07g020680.1 Sb07g020680.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM2 1.10e-68 231.8 322 543
Organism Sorghum bicolor
Domain Profile
  HDM JHDM2
      JHDM2.txt   5 rdgklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvy..............vgilkkkwaeedlkellksieeeeld 86 
                    + g +N+++ lp+ +++ dlgPk y AyG+ +e +r++++t+lh+d++davn+lv+              v  lk k+  +  kel +     + d
  Sb07g020680.1 322 KSGFFNISTLLPDGVIKVDLGPKSYIAYGFPQELGRGDSVTKLHCDLTDAVNVLVHttkvppsnkeqenaVAELKRKHRAQSRKELANGD-GSDGD 416
                    56889*************************************************************999888888888888877776554.44444 PP
      JHDM2.txt  87 ev.trkrvqdpkekpgalWhifaakdaekirellekvskeqga.evppdhdpihdqswyldrklrkrLfeeyGvegwtlvQklgdavlipagapHq 180
                        ++  +  + ++galW+if+++d++k++e+l k+ske+++ + +++++p+hd ++yl+r+++k+L+ee+Gve+wtl+Qklg+av+ipag+pHq
  Sb07g020680.1 417 AQdNKQSPNYMEDEEGALWDIFRREDVPKLKEYLIKHSKEFRHtHCSQVYNPMHDGTFYLTREHIKKLKEEFGVEPWTLLQKLGEAVFIPAGCPHQ 512
                    440445555567789***************************96678999********************************************** PP
      JHDM2.txt 181 vqnlkscvkvaedFvsPEnvkecfrltkeyr 211
                    v+nl+sc+k+a dFvsPEnv ec+rlt+++r
  Sb07g020680.1 513 VRNLQSCMKIALDFVSPENVRECLRLTEDFR 543
                    *****************************98 PP
Protein Sequence
(Fasta)		MALYHCMCGS DNCDTSIYDL HRACPRCDYE LCITCCRELR EGNLRGSCLK TKDNEYPNLG 60
ADYLHGGDAA AAALPDPSPS SGDPSDDEVI TSMIGAWVAD THELADGRIR CPPEELGGCG 120
GRRTLRLKRM FPENWLADLE ADASAALPTK FKIADESVCS CYYSGDPATQ STTKVASARE 180
NSQDNRLYYL VSDGSEEDDV KHFQKHWVRG EAVVARGVLR KMSGLSWEPP ELWSALKLNG 240
DHRRRSEFRN IKAIDCLALC EVKLHKNDFF RGYYKGMRLP NQWPQMLKLN DWPPSADFED 300
LLPVHGDKYI NALPFQPYTN AKSGFFNIST LLPDGVIKVD LGPKSYIAYG FPQELGRGDS 360
VTKLHCDLTD AVNVLVHTTK VPPSNKEQEN AVAELKRKHR AQSRKELANG DGSDGDAQDN 420
KQSPNYMEDE EGALWDIFRR EDVPKLKEYL IKHSKEFRHT HCSQVYNPMH DGTFYLTREH 480
IKKLKEEFGV EPWTLLQKLG EAVFIPAGCP HQVRNLQSCM KIALDFVSPE NVRECLRLTE 540
DFRMLPKGHR AKKDILEIDL SDKGPGVKQL CYEFRNLIQP SYICCHFTIW RLFDHQGSLE 600
LLLHRLL 607
Nucleotide Sequence
(Fasta)		ATGGCCTTGT ATCATTGTAT GTGCGGCAGC GACAACTGCG ACACGTCGAT CTACGACCTC 60
CACAGGGCCT GCCCACGCTG CGACTACGAG CTCTGCATCA CCTGCTGCAG GGAGCTCCGT 120
GAAGGAAACC TACGAGGTTC CTGCTTGAAA ACCAAGGACA ACGAGTATCC CAACCTCGGC 180
GCAGACTACC TGCACGGCGG CGACGCTGCG GCTGCAGCAC TGCCAGATCC AAGCCCGTCG 240
TCAGGCGACC CATCAGACGA CGAGGTGATC ACATCTATGA TCGGAGCTTG GGTGGCCGAT 300
ACCCACGAGC TCGCCGACGG CCGCATCCGG TGTCCTCCGG AAGAGCTTGG CGGCTGTGGC 360
GGCCGCCGCA CGCTCAGGCT CAAGAGGATG TTTCCGGAGA ACTGGCTCGC CGACCTTGAA 420
GCCGATGCCT CTGCTGCATT GCCGACCAAG TTTAAGATTG CTGATGAGAG TGTGTGCTCA 480
TGCTATTACT CTGGTGATCC AGCAACCCAG AGCACAACAA AGGTAGCATC AGCTAGGGAA 540
AACTCGCAGG ATAATCGCTT GTACTACCTG GTGTCGGACG GCAGCGAGGA GGATGATGTG 600
AAGCATTTCC AGAAGCACTG GGTGAGAGGA GAAGCCGTGG TGGCTCGGGG TGTGCTCCGG 660
AAAATGTCAG GCTTGAGCTG GGAGCCACCA GAGTTGTGGT CTGCATTAAA GTTAAACGGC 720
GATCACAGGC GGCGTTCAGA GTTCAGGAAT ATTAAGGCCA TAGATTGCCT TGCTCTCTGT 780
GAGGTTAAAC TACACAAAAA TGATTTCTTC AGAGGGTATT ACAAAGGCAT GAGGCTTCCC 840
AATCAGTGGC CACAAATGCT AAAGCTAAAT GATTGGCCTC CTTCAGCAGA TTTTGAAGAT 900
CTTTTACCTG TGCATGGAGA CAAGTATATA AACGCATTGC CTTTTCAGCC TTACACAAAT 960
GCAAAATCTG GCTTCTTCAA TATCTCTACT TTGCTTCCTG ATGGGGTCAT AAAGGTTGAT 1020
CTTGGACCCA AATCATATAT AGCTTATGGC TTCCCACAAG AGCTTGGCAG AGGGGATTCC 1080
GTCACAAAGC TTCACTGCGA CTTAACTGAT GCTGTCAATG TTCTTGTGCA CACCACAAAG 1140
GTCCCCCCTT CTAATAAGGA ACAAGAGAAT GCAGTTGCGG AGCTCAAAAG AAAACATAGG 1200
GCACAAAGTC GGAAGGAATT GGCAAATGGC GATGGTAGTG ACGGTGACGC ACAAGATAAT 1260
AAGCAATCAC CTAACTATAT GGAGGATGAG GAAGGTGCTC TTTGGGACAT ATTTAGAAGA 1320
GAAGATGTCC CAAAATTAAA AGAATATCTC ATTAAGCACT CCAAGGAGTT CCGCCATACA 1380
CATTGCTCCC AAGTGTATAA TCCGATGCAT GATGGAACAT TTTATTTGAC AAGAGAGCAC 1440
ATAAAGAAGC TCAAAGAGGA ATTCGGAGTA GAGCCGTGGA CCCTACTACA AAAGCTTGGG 1500
GAAGCTGTTT TCATACCTGC TGGTTGCCCT CATCAAGTCC GCAATCTTCA GTCCTGCATG 1560
AAGATTGCTC TAGACTTTGT TTCACCAGAG AATGTTAGAG AATGTCTGCG CTTGACTGAA 1620
GACTTCCGCA TGCTACCTAA AGGACATAGG GCAAAGAAAG ATATATTAGA GATTGATTTA 1680
TCGGATAAAG GGCCGGGGGT GAAACAACTA TGCTATGAGT TCAGGAATTT AATACAGCCA 1740
AGTTACATTT GCTGTCACTT CACTATATGG CGACTTTTTG ATCACCAGGG GTCCTTGGAA 1800
CTCTTGCTCC ATCGCCTGCT ATAA 1825
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orbr-0109 OB09G15930.1 Oryza brachyantha 56 3e-158 556
WERAM-Orgl-0100 OGLUM09G09380.1 Oryza glumaepatula 55 6e-158 555
WERAM-Tra-0176 Traes_5AL_C9FC195D1.2 Triticum aestivum 53 8e-158 554
WERAM-Ori-0112 BGIOSGA030706-PA Oryza indica 55 1e-157 554
WERAM-Orr-0107 ORUFI09G09860.1 Oryza rufipogon 55 8e-157 551
WERAM-Orl-0059 KN539156.1_FGP008 Oryza longistaminata 55 2e-156 550
WERAM-Aet-0048 EMT13865 Aegilops tauschii 54 7e-156 548
WERAM-Tru-0042 TRIUR3_19853-P1 Triticum urartu 53 8e-154 541
WERAM-Zem-0051 GRMZM2G070885_P01 Zea mays 51 2e-148 523
WERAM-Sei-0105 Si028936m Setaria italica 54 5e-148 522
WERAM-Lep-0100 LPERR09G06290.1 Leersia perrieri 54 2e-146 516
WERAM-Orm-0094 OMERI09G07170.1 Oryza meridionalis 61 5e-145 512
WERAM-Orb-0104 OBART09G09130.1 Oryza barthii 61 8e-145 511
WERAM-Orni-0101 ONIVA09G08110.1 Oryza nivara 61 2e-144 510
WERAM-Orp-0097 OPUNC09G07740.1 Oryza punctata 61 2e-143 506
WERAM-Ors-0092 OS09T0393200-01 Oryza sativa 63 2e-140 496
WERAM-Brd-0109 BRADI4G29617.1 Brachypodium distachyon 59 1e-139 494
WERAM-Sot-0046 PGSC0003DMT400042379 Solanum tuberosum 49 1e-139 494
WERAM-Art-0009 AT1G11950.1 Arabidopsis thaliana 50 4e-139 492
WERAM-Sol-0029 Solyc02g081010.1.1 Solanum lycopersicum 50 6e-138 488
WERAM-Thc-0081 EOY28779 Theobroma cacao 48 5e-137 485
WERAM-Arl-0042 fgenesh2_kg.1__ 1301__ AT1G11950.1 Arabidopsis lyrata 50 2e-136 483
WERAM-Bro-0174 Bo9g038630.1 Brassica oleracea 51 1e-135 481
WERAM-Viv-0067 VIT_10s0116g00960.t01 Vitis vinifera 47 1e-130 464
WERAM-Prp-0037 EMJ15852 Prunus persica 55 5e-128 456
WERAM-Brr-0135 Bra027055.1-P Brassica rapa 57 4e-127 452
WERAM-Glm-0193 GLYMA15G11770.2 Glycine max 46 1e-126 451
WERAM-Pot-0063 POPTR_0005s09360.1 Populus trichocarpa 53 2e-122 437
WERAM-Hov-0014 MLOC_13090.1 Hordeum vulgare 62 5e-121 432
WERAM-Met-0035 AES62954 Medicago truncatula 45 3e-118 423
WERAM-Php-0022 PP1S144_17V6.1 Physcomitrella patens 40 3e-106 383
WERAM-Mua-0058 GSMUA_Achr3P14190_001 Musa acuminata 40 2e-73 274
WERAM-Org-0037 ORGLA03G0207400.1 Oryza glaberrima 40 1e-70 265
WERAM-Amt-0077 ERM98415 Amborella trichopoda 40 5e-68 256
WERAM-Lac-0170 ENSLACP00000020024.1 Latimeria chalumnae 36 8e-56 215
WERAM-Anc-0075 ENSACAP00000007027.2 Anolis carolinensis 35 1e-55 215
WERAM-Dar-0145 ENSDARP00000084278.5 Danio rerio 35 1e-55 215
WERAM-Sus-0108 ENSSSCP00000015245.2 Sus scrofa 35 2e-55 214
WERAM-Tag-0001 ENSTGUP00000000018.1 Taeniopygia guttata 35 3e-55 214
WERAM-Caj-0074 ENSCJAP00000012191.1 Callithrix jacchus 35 4e-55 213
WERAM-Nol-0092 ENSNLEP00000010895.1 Nomascus leucogenys 35 4e-55 213
WERAM-Fec-0021 ENSFCAP00000001589.3 Felis catus 35 4e-55 213
WERAM-Chs-0157 ENSCSAP00000009298.1 Chlorocebus sabaeus 35 4e-55 213
WERAM-Aim-0189 ENSAMEP00000017468.1 Ailuropoda melanoleuca 35 4e-55 213
WERAM-Paa-0043 ENSPANP00000002578.1 Papio anubis 35 5e-55 213
WERAM-Ptv-0087 ENSPVAP00000007885.1 Pteropus vampyrus 35 5e-55 213
WERAM-Poa-0141 ENSPPYP00000017696.1 Pongo abelii 35 5e-55 213
WERAM-Mim-0018 ENSMICP00000001555.1 Microcebus murinus 35 5e-55 213
WERAM-Ova-0174 ENSOARP00000017606.1 Ovis aries 35 5e-55 213
WERAM-Orc-0080 ENSOCUP00000007280.2 Oryctolagus cuniculus 35 5e-55 213
WERAM-Mup-0101 ENSMPUP00000009333.1 Mustela putorius furo 35 5e-55 213
WERAM-Dan-0091 ENSDNOP00000009144.3 Dasypus novemcinctus 35 5e-55 213
WERAM-Gog-0012 ENSGGOP00000000822.2 Gorilla gorilla 35 5e-55 213
WERAM-Pat-0141 ENSPTRP00000029560.2 Pan troglodytes 35 5e-55 213
WERAM-Mam-0003 ENSMMUP00000000618.2 Macaca mulatta 35 6e-55 213
WERAM-Hos-0102 ENSP00000326563.5 Homo sapiens 35 6e-55 213
WERAM-Otg-0093 ENSOGAP00000008081.2 Otolemur garnettii 35 6e-55 213
WERAM-Bot-0099 ENSBTAP00000013278.4 Bos taurus 35 6e-55 213
WERAM-Loa-0020 ENSLAFP00000001269.3 Loxodonta africana 35 6e-55 213
WERAM-Caf-0016 ENSCAFP00000001774.3 Canis familiaris 35 6e-55 213
WERAM-Gaga-0080 ENSGALP00000012399.4 Gallus gallus 35 7e-55 213
WERAM-Asm-0165 ENSAMXP00000016507.1 Astyanax mexicanus 35 7e-55 212
WERAM-Fia-0049 ENSFALP00000003539.1 Ficedula albicollis 35 7e-55 212
WERAM-Myl-0184 ENSMLUP00000015336.2 Myotis lucifugus 35 7e-55 212
WERAM-Eqc-0143 ENSECAP00000015928.1 Equus caballus 35 7e-55 212
WERAM-Anp-0111 ENSAPLP00000012780.1 Anas platyrhynchos 35 8e-55 212
WERAM-Meg-0102 ENSMGAP00000010078.1 Meleagris gallopavo 35 8e-55 212
WERAM-Mod-0100 ENSMODP00000015209.4 Monodelphis domestica 35 9e-55 212
WERAM-Sah-0129 ENSSHAP00000013821.1 Sarcophilus harrisii 35 1e-54 212
WERAM-Mum-0157 ENSMUSP00000037628.7 Mus musculus 35 1e-54 212
WERAM-Cap-0028 ENSCPOP00000002138.2 Cavia porcellus 35 1e-54 211
WERAM-Leo-0085 ENSLOCP00000011676.1 Lepisosteus oculatus 36 1e-54 211
WERAM-Gam-0008 ENSGMOP00000000972.1 Gadus morhua 34 2e-54 211
WERAM-Orla-0053 ENSORLP00000006841.1 Oryzias latipes 35 3e-54 210
WERAM-Tar-0009 ENSTRUP00000002076.1 Takifugu rubripes 35 3e-54 210
WERAM-Ran-0218 ENSRNOP00000067649.2 Rattus norvegicus 35 4e-54 210
WERAM-Ora-0023 ENSOANP00000003317.1 Ornithorhynchus anatinus 36 4e-54 210
WERAM-Xet-0043 ENSXETP00000014664.3 Xenopus tropicalis 35 4e-54 209
WERAM-Mae-0023 ENSMEUP00000001666.1 Macropus eugenii 35 6e-54 209
WERAM-Orn-0157 ENSONIP00000016309.1 Oreochromis niloticus 34 9e-54 209
WERAM-Pof-0098 ENSPFOP00000008824.2 Poecilia formosa 35 1e-53 208
WERAM-Tas-0095 ENSTSYP00000010010.1 Tarsius syrichta 35 2e-53 207
WERAM-Ocp-0022 ENSOPRP00000001989.2 Ochotona princeps 35 2e-53 207
WERAM-Xim-0102 ENSXMAP00000009010.1 Xiphophorus maculatus 35 2e-53 207
WERAM-Pes-0047 ENSPSIP00000007045.1 Pelodiscus sinensis 34 2e-53 207
Created Date 25-Jun-2016