WERAM Information

Tag Content
WERAM ID WERAM-Php-0034
Ensembl Protein ID PP1S178_123V6.1
Gene Name PHYPADRAFT_168658
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PP1S178_123V6 PP1S178_123V6.1 PP1S178_123V6.1
PP1S178_123V6 PP1S178_123V6.2 PP1S178_123V6.2
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 3.80e-08 34.3 39 112
Organism Physcomitrella patens
Domain Profile
  Me_Reader PHD
          PHD.txt 17 mvqCdeCd 24
                     +  C+ C+
  PP1S178_123V6.1 39 VTLCNACK 46
                     33366665 PP
          PHD.txt   2 tiClvC.g..kddegeke.......mvqCde..CddwfHlkCvklplsslpegkswyCpsCke 52 
                      ++C++C +  ++++           +v Cd+  C++w+H++C     +++ + + ++Cp+C+e
  PP1S178_123V6.1  53 KFCPFCvQiyREKD---PdsfdgkeWVGCDNrtCRRWVHVECEVSGGNQVDSTAFYLCPNCRE 112
                      79****54552222...12336667******************99989999885699****97 PP
Protein Sequence
(Fasta)		MFSRQLCSNP HCKRTSPGDG PTCRWHVRNY GSQKDPKHVT LCNACKINFD QGKFCPFCVQ 60
IYREKDPDSF DGKEWVGCDN RTCRRWVHVE CEVSGGNQVD STAFYLCPNC RENTQEYAEK 120
KRCSRLPQEQ PAVVATCQTY ADNSSSELEQ KPKVSLSLRS TRRPLQVDLS KLDTSSLKRY 180
RRVYNLREVT GSGKEELVPA VAQHFAAQVV EENETLLSFA FFLKKQQTFA TSSMTQHQVA 240
HPVAK 245
Nucleotide Sequence
(Fasta)		GTAAGTGTTG CCATGAGCTG CGACAGTCGT TGCGATTTGT GGGTATGATC GGGGAGGAGG 60
AATCTGGACG AGAGGGTTAG TTTGGGGTTA AGAAAAGAGG ATTCTGAGTG TGGGGAGGTG 120
AGGAGGACGA GGAGGTGTAG TTTGAGGGTT GGACAATGTG GAGGAGAGTT TCTTGGAGAG 180
TTTTTTAATT TAGTCTTTTT ATTTTCATAT TTTTGATGGT TCTTGAATTG AGCTCTGGGG 240
ATGGCGTGAC TAAAGCTGTA CTGTGGAGTT TTAGCTTCGA TAATGGTGAC AGCGACAGGG 300
GTGATGGTAG GCGATGTTGA TGGCGATGGG GCTGTGAGGA CTGACTTGAG TTCTTTGAGG 360
GAGAGGGAAA TCTGAAGCGG GGTTGATCGT CTTGGGAAAG AGCGGGAAGT TCGTTCCTTG 420
AGTTGTGCTG GACGATCAAT TAAGGCTTGT GCCGGTGCCC TTGTTCAGAT GGTTTTGGCT 480
CAACTCGGTT TGTAGTCATG TTTTCGAGGC AGCTTTGTTC AAATCCTCAT TGCAAGCGGA 540
CCTCTCCGGG GGATGGACCG ACCTGTCGGT GGCATGTACG GAACTATGGG AGCCAGAAGG 600
ACCCTAAACA TGTCACCCTC TGCAATGCTT GCAAGATCAA CTTCGATCAG GGAAAATTCT 660
GTCCTTTCTG TGTGCAAATT TACCGCGAGA AGGATCCTGA CTCTTTCGAC GGGAAGGAGT 720
GGGTAGGCTG CGACAACCGA ACTTGTCGTC GTTGGGTTCA TGTGGAATGT GAAGTTAGTG 780
GAGGCAACCA AGTGGATTCC ACAGCATTTT ACCTCTGTCC CAACTGCAGA GAGAACACGC 840
AGGAATATGC GGAGAAAAAG CGATGTAGTC GCTTGCCTCA AGAACAACCA GCAGTGGTTG 900
CTACCTGCCA GACCTATGCG GATAATAGTT CTTCTGAGCT TGAGCAGAAG CCAAAGGTGT 960
CTTTATCCCT GAGAAGCACA AGACGACCCT TGCAAGTTGA TCTGTCCAAA CTGGATACAT 1020
CTTCATTGAA GCGGTATCGG CGTGTCTACA ATTTGAGGGA AGTGACGGGC AGCGGCAAGG 1080
AGGAGCTCGT TCCAGCTGTT GCTCAACACT TTGCTGCTCA GGTTGTAGAG GAGAACGAGA 1140
CGCTGCTCTC CTTCGCCTTT TTCCTGAAGA AACAACAAAC TTTTGCAACC TCATCTATGA 1200
CCCAGCATCA GGTTGCGCAC CCAGTAGCGA AGTAATCCGA ATGTTGTCCA CTGAAGGCAG 1260
TACAGAGAAC GAACCATCCA ATGCATTGCC CTCTGTTCTG CTCATTCTTG TAACTGTACA 1320
GTCTCTTCGC TATTTTCAAT ATGCAGCTTT GAAACCACTC CTTCATGGAG GTGTAACATA 1380
TGGCCAAGAT CCACTTAGCA GAGATTAAAG GATAACTGCT TGCTAACGTG TCACATCAGA 1440
TTCCTTATTT CTTTGGGCGC GACACTGGCT CTGGACATCG GGCGGACACT GGACTGGTGG 1500
ACAATGTTAC AGGGTTAATT CGATATAACT AGAGGCTTTA GTTCAAATTT TGCTCACTTG 1560
ATTCCCTATT AGGCCTTCCA GGGTAAAGAT GATACACTAA AATCGAATGA TCAAACTTGT 1620
TCCGACCTTG GAGGTCGAAA TTGACCTACC ATCGCGACTG ACGGTCAGGA TTTTGATTCG 1680
AGTAAGACTG AGGTTTGCTA CCAGCACGAT TTAAATTACA GCAGTCCTTA CCGATTTACA 1740
ACAAACGATC CGGTTAACAT A 1762
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sol-0013 Solyc01g087430.2.1 Solanum lycopersicum 32 1e-09 60.5
WERAM-Met-0094 KEH29501 Medicago truncatula 32 6e-09 58.5
WERAM-Art-0087 AT3G52100.1 Arabidopsis thaliana 32 1e-08 57.8
WERAM-Arl-0072 fgenesh2_kg.3__ 844__ AT3G08020.1 Arabidopsis lyrata 32 1e-08 57.0
WERAM-Glm-0137 GLYMA12G01040.1 Glycine max 32 2e-08 56.6
WERAM-Mua-0012 GSMUA_Achr10P21800_001 Musa acuminata 37 2e-08 56.2
WERAM-Amt-0090 ERN00866 Amborella trichopoda 32 4e-08 55.8
WERAM-Thc-0017 EOX96661 Theobroma cacao 31 4e-08 55.5
WERAM-Brr-0201 Bra040045.1-P Brassica rapa 31 5e-08 55.5
WERAM-Bro-0020 Bo1g145070.1 Brassica oleracea 31 6e-08 55.1
WERAM-Viv-0082 VIT_13s0064g00630.t01 Vitis vinifera 31 7e-08 54.7
WERAM-Pot-0105 POPTR_0009s06460.1 Populus trichocarpa 31 8e-08 54.7
WERAM-Orbr-0125 OB12G21490.1 Oryza brachyantha 30 1e-07 54.3
WERAM-Prp-0032 EMJ21805 Prunus persica 30 1e-07 53.9
WERAM-Tra-0246 Traes_5DS_E82950B9C.1 Triticum aestivum 30 2e-07 53.1
WERAM-Sei-0081 Si021380m Setaria italica 30 2e-07 53.1
WERAM-Brd-0094 BRADI4G06137.1 Brachypodium distachyon 30 3e-07 53.1
WERAM-Zem-0055 GRMZM2G081350_P01 Zea mays 30 3e-07 52.8
WERAM-Drm-0094 FBpp0072043 Drosophila melanogaster 28 3e-07 52.8
WERAM-Lep-0118 LPERR12G11680.1 Leersia perrieri 30 4e-07 52.4
WERAM-Orb-0123 OBART12G14210.1 Oryza barthii 30 4e-07 52.4
WERAM-Ors-0110 OS12T0527800-01 Oryza sativa 30 5e-07 52.0
WERAM-Orr-0123 ORUFI12G15660.1 Oryza rufipogon 30 5e-07 52.0
WERAM-Org-0115 ORGLA12G0122900.1 Oryza glaberrima 30 5e-07 52.0
WERAM-Orni-0122 ONIVA12G14190.1 Oryza nivara 30 5e-07 52.0
WERAM-Orgl-0120 OGLUM12G15650.1 Oryza glumaepatula 30 5e-07 52.0
WERAM-Orp-0113 OPUNC12G12830.1 Oryza punctata 30 5e-07 52.0
WERAM-Orl-0077 KN539619.1_FGP013 Oryza longistaminata 30 5e-07 52.0
WERAM-Ori-0124 BGIOSGA036080-PA Oryza indica 30 7e-07 51.6
WERAM-Hov-0071 MLOC_58575.1 Hordeum vulgare 30 7e-07 51.6
WERAM-Sem-0035 EFJ36650 Selaginella moellendorffii 25 6e-06 48.5
WERAM-Osl-0005 ABO95163 Ostreococcus lucimarinus 33 1e-05 47.8
Created Date 25-Jun-2016