WERAM Information

Tag Content
WERAM ID WERAM-Sot-0085
Ensembl Protein ID PGSC0003DMT400072425
Gene Name PGSC0003DMG400028181
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PGSC0003DMG400028181 PGSC0003DMT400072425 PGSC0003DMT400072425
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 4.10e-13 50.7 273 674
Organism Solanum tuberosum
Domain Profile
  Me_Reader PHD
               PHD.txt   4 ClvCgkddegekemvqCdeCd 24 
                           C+ C                +
  PGSC0003DMT400072425 273 CRDC----------------K 277
                           3333................2 PP
               PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                           ++C++C  +d g+  +v Cd+C+++fH +C +l+  ++p g +wyC+ C+
  PGSC0003DMT400072425 530 DLCIIC--ADGGK--LVLCDGCPRAFHKECASLS--TIPRG-KWYCKYCE 572
                           58****..44443..9******************..*****.*******7 PP
               PHD.txt   4 ClvCg.....kddegeke.....mvqCdeCddwfHlkCvklp....lsslpegkswyCps 49 
                           C++C+     k+           ++ Cd+C++ +H+ C+k +    l++lp+g +w+C  
  PGSC0003DMT400072425 621 CVLCRaydfsKS-----GfgprtVILCDQCEKEYHVGCLKKSkiadLKELPKG-KWFCSV 674
                           999*73434344.....245555*****************9999999******.****74 PP
Protein Sequence
(Fasta)		MTAKTNREFD ISSPAEEKPP AQSRVPESEP ETGDLNRRKP DEPQVKVSGS NGVVVYRRNK 60
RRKTADSNRN SSGKVVNMDV TKGNLGISAS NGDVVEVEVK EESRSKRFTR SALGRKRELL 120
EITNGNSGGE VDERSDEVMS GTPTKKLEMK MSKKISITVI PETVKELFET GLLEGYPVFY 180
NGGKKGIPLR GTIKDTGILC SCELCKGATV VPPSKFEIHA CNSYRRASEY ICLENGKSLL 240
DVVKECRKGS LKTLEETIQS VIGPVPVKKS IFCRDCKGSF VATLAGNDEQ LCDSCIVSLR 300
SEATPTQSIN TENGVFEPVL NLNSSGTSNM SSVSLRSIKG RKKKKVAIKH SSRQSPSAHT 360
LSRKKWKTPN KVTKPVFAPK SDETSIMCSS FRNNMQGNIS EKLLKSVVVS KYSKVASPGV 420
SVHSRTQWKM TKRDQKMHRL VFEEGGLPEG TEVAYYSRGK KLLVGYKKGS GIFCSCCNTE 480
VSPSQFEAHA GWASRKKPYG YIYTSNGVSL HEFAISLLKG RKSSVKDSDD LCIICADGGK 540
LVLCDGCPRA FHKECASLST IPRGKWYCKY CESMLQREKF AERNTNALAA GRISGIDPIE 600
QITNRCIRFV KNAEEAEFIA CVLCRAYDFS KSGFGPRTVI LCDQCEKEYH VGCLKKSKIA 660
DLKELPKGKW FCSVDCKRIY SALQNLLNSG EERLPDSCLD AARVKEKHNS LVAVGELDVR 720
WRLLSGRISS RETRRLLAEA VSIFHDGFDP IVDSVTGRDF IPSMVYG 767
Nucleotide Sequence
(Fasta)		CCTCTTTCGT CTTCCTTATT CCATCGGCCG AAGGGTTATA TAAATACTGT TCCTCAGCAG 60
AAACGCCGAT TTCATGCTTC TGAATTTTCT CATCTTGTAC AGATCCATAG TTCAGTTCTC 120
TTGAGTTGTT GTTGTTGTGT TCACACTAAT CGGAACACAT CAGAACCAAT GACGGCAAAA 180
ACAAACCGTG AATTTGACAT CTCATCGCCG GCGGAGGAAA AACCGCCGGC TCAATCTCGG 240
GTACCAGAAT CCGAACCGGA AACCGGTGAT CTGAACCGGC GTAAGCCGGA CGAACCTCAG 300
GTTAAGGTTA GTGGTAGTAA CGGCGTCGTT GTATACAGGA GGAACAAGAG GCGGAAGACG 360
GCAGATTCAA ACCGAAATTC AAGTGGTAAA GTTGTAAATA TGGATGTGAC GAAGGGTAAT 420
TTAGGAATTT CAGCGAGTAA CGGTGATGTT GTGGAGGTTG AAGTGAAAGA AGAGTCGAGG 480
AGTAAGCGGT TTACACGGTC CGCTTTGGGG AGGAAGAGGG AGCTGTTGGA GATTACGAAT 540
GGAAATTCTG GAGGTGAAGT TGATGAGAGA AGTGATGAAG TTATGTCTGG TACACCTACG 600
AAGAAACTAG AAATGAAAAT GTCGAAGAAG ATTTCAATTA CAGTAATACC TGAAACGGTG 660
AAGGAGCTGT TCGAGACTGG TTTATTGGAA GGCTATCCTG TTTTCTACAA TGGTGGGAAG 720
AAGGGAATTC CACTCCGAGG AACAATTAAA GATACTGGAA TCCTTTGTTC TTGTGAACTG 780
TGCAAGGGAG CTACAGTTGT CCCTCCTAGC AAATTTGAGA TCCATGCGTG TAATTCATAC 840
AGACGTGCAT CAGAGTATAT CTGCCTAGAA AATGGCAAGA GCCTCCTTGA CGTGGTCAAA 900
GAGTGTAGAA AAGGTTCCTT GAAAACATTA GAAGAAACAA TTCAGAGTGT TATCGGTCCA 960
GTTCCTGTGA AGAAAAGTAT CTTTTGTCGG GATTGCAAGG GGTCTTTTGT TGCAACACTA 1020
GCTGGAAATG ATGAACAACT TTGTGATTCA TGCATCGTTT CCTTAAGATC AGAAGCCACT 1080
CCAACACAGT CGATAAACAC TGAAAATGGG GTGTTTGAGC CAGTTCTGAA CTTAAATTCC 1140
TCCGGAACTT CAAATATGTC GTCTGTTTCG CTAAGAAGCA TTAAGGGAAG GAAAAAGAAA 1200
AAGGTCGCGA TAAAGCATTC GAGTAGACAG TCTCCTTCAG CGCATACTCT CTCCAGAAAG 1260
AAGTGGAAGA CACCAAATAA GGTAACGAAG CCAGTTTTTG CTCCAAAGTC GGATGAAACT 1320
TCTATAATGT GCAGTTCATT CAGAAACAAC ATGCAGGGAA ACATCTCAGA AAAACTGTTA 1380
AAATCAGTTG TAGTTTCAAA GTATTCGAAA GTTGCTTCGC CTGGTGTCTC GGTGCACTCT 1440
AGGACCCAAT GGAAAATGAC AAAAAGGGAT CAAAAGATGC ATAGATTGGT TTTTGAGGAA 1500
GGTGGACTGC CTGAAGGAAC TGAAGTAGCT TATTATTCTC GAGGAAAGAA ATTGCTTGTT 1560
GGTTATAAGA AGGGATCTGG TATATTCTGT TCTTGCTGCA ATACTGAGGT TAGTCCATCT 1620
CAGTTTGAAG CTCATGCAGG TTGGGCATCG CGCAAAAAAC CTTATGGGTA TATTTACACG 1680
TCTAATGGAG TTTCGCTACA TGAATTTGCT ATATCTCTAT TAAAAGGCCG CAAGTCTTCA 1740
GTTAAAGACA GTGATGACTT GTGCATCATA TGCGCAGATG GTGGTAAACT AGTGCTTTGT 1800
GATGGATGTC CTAGGGCTTT CCATAAAGAG TGTGCATCAT TATCAACTAT CCCTCGTGGT 1860
AAATGGTACT GCAAGTATTG TGAAAGCATG TTACAGAGGG AGAAGTTTGC GGAGCGCAAT 1920
ACGAATGCCT TAGCAGCCGG CAGGATCTCC GGCATTGATC CTATTGAGCA AATAACAAAC 1980
CGTTGCATTC GTTTTGTCAA GAATGCAGAA GAGGCAGAAT TTATTGCATG TGTTTTATGC 2040
AGAGCTTATG ACTTTAGCAA GTCTGGTTTT GGTCCACGGA CTGTCATCCT TTGTGACCAG 2100
TGTGAGAAAG AGTATCATGT TGGCTGCTTG AAGAAAAGCA AGATAGCAGA TTTAAAGGAA 2160
TTGCCTAAAG GAAAATGGTT CTGTAGTGTG GATTGCAAGA GGATCTATTC TGCCTTGCAA 2220
AATTTGCTTA ACTCAGGAGA AGAGAGGTTG CCTGATTCTT GTTTGGATGC AGCAAGGGTG 2280
AAGGAAAAAC ATAACAGTTT GGTTGCTGTT GGTGAACTTG ATGTTAGATG GAGGCTTCTT 2340
AGTGGCAGAA TTTCCTCCCG TGAAACCAGA AGGCTACTGG CAGAAGCTGT TTCTATCTTC 2400
CATGATGGTT TCGATCCTAT TGTTGATTCA GTAACTGGAC GTGACTTCAT TCCTTCTATG 2460
GTTTATGGGT AGGCTTTGTT C 2482
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sol-0128 Solyc10g083800.1.1 Solanum lycopersicum 98 0.0 1418
WERAM-Thc-0061 EOY08018 Theobroma cacao 56 0.0 710
WERAM-Glm-0111 GLYMA10G07170.3 Glycine max 48 2e-176 616
WERAM-Prp-0031 EMJ05208 Prunus persica 75 6e-156 548
WERAM-Met-0159 AES81946 Medicago truncatula 66 1e-145 514
WERAM-Pot-0076 POPTR_0006s12180.1 Populus trichocarpa 67 8e-143 505
WERAM-Art-0047 AT2G27980.1 Arabidopsis thaliana 43 2e-137 487
WERAM-Viv-0053 VIT_08s0007g04490.t01 Vitis vinifera 68 3e-136 483
WERAM-Arl-0074 fgenesh2_kg.4__ 1712__ AT2G36720.1 Arabidopsis lyrata 61 4e-133 473
WERAM-Bro-0084 Bo4g186380.1 Brassica oleracea 60 1e-128 458
WERAM-Brr-0090 Bra017226.1-P Brassica rapa 59 1e-125 448
WERAM-Mua-0072 GSMUA_Achr4P12040_001 Musa acuminata 62 6e-123 439
WERAM-Amt-0092 ERN04758 Amborella trichopoda 58 6e-115 412
WERAM-Orgl-0067 OGLUM06G29720.1 Oryza glumaepatula 55 3e-113 407
WERAM-Brd-0016 BRADI1G29167.1 Brachypodium distachyon 54 4e-113 406
WERAM-Orni-0068 ONIVA06G31450.1 Oryza nivara 55 1e-112 405
WERAM-Orb-0069 OBART06G28330.1 Oryza barthii 55 1e-112 404
WERAM-Sei-0021 Si005834m Setaria italica 55 1e-111 401
WERAM-Tra-0282 Traes_7AL_153E1A74A.2 Triticum aestivum 54 4e-110 396
WERAM-Lep-0068 LPERR06G23780.2 Leersia perrieri 52 3e-102 370
WERAM-Sob-0140 Sb10g031300.1 Sorghum bicolor 53 1e-101 368
WERAM-Tru-0001 TRIUR3_00440-P1 Triticum urartu 52 7e-99 359
WERAM-Org-0067 ORGLA06G0289000.1 Oryza glaberrima 48 9e-97 352
WERAM-Orl-0030 KN538785.1_FGP006 Oryza longistaminata 49 2e-91 334
WERAM-Orbr-0067 OB06G10140.1 Oryza brachyantha 48 1e-90 332
WERAM-Orr-0071 ORUFI06G30250.1 Oryza rufipogon 49 1e-90 331
WERAM-Orp-0055 OPUNC06G00070.1 Oryza punctata 49 7e-90 329
WERAM-Ors-0053 OS06T0101000-01 Oryza sativa 48 7e-90 329
WERAM-Zem-0076 GRMZM2G134214_P01 Zea mays 47 5e-88 323
WERAM-Orm-0055 OMERI06G00010.1 Oryza meridionalis 46 1e-87 322
WERAM-Hov-0034 MLOC_36594.1 Hordeum vulgare 47 2e-86 318
WERAM-Ori-0069 BGIOSGA022119-PA Oryza indica 47 2e-76 285
WERAM-Php-0096 PP1S412_30V6.1 Physcomitrella patens 41 1e-75 281
WERAM-Sem-0001 EFJ24916 Selaginella moellendorffii 28 2e-30 132
WERAM-Aet-0069 EMT23788 Aegilops tauschii 27 8e-28 123
WERAM-Ect-0045 ENSETEP00000004800.1 Echinops telfairi 29 2e-14 79.0
WERAM-Mim-0059 ENSMICP00000006034.1 Microcebus murinus 32 3e-14 77.8
WERAM-Chh-0003 ENSCHOP00000000249.1 Choloepus hoffmanni 30 4e-14 77.8
WERAM-Tut-0182 ENSTTRP00000015268.1 Tursiops truncatus 30 4e-14 77.8
WERAM-Ran-0118 ENSRNOP00000052823.4 Rattus norvegicus 30 4e-14 77.8
WERAM-Ere-0102 ENSEEUP00000010821.1 Erinaceus europaeus 32 4e-14 77.8
WERAM-Mum-0216 ENSMUSP00000060054.8 Mus musculus 30 4e-14 77.8
WERAM-Otg-0102 ENSOGAP00000008965.2 Otolemur garnettii 30 4e-14 77.8
WERAM-Xet-0118 ENSXETP00000041129.3 Xenopus tropicalis 28 5e-14 77.4
WERAM-Cap-0103 ENSCPOP00000007645.2 Cavia porcellus 30 5e-14 77.4
WERAM-Aim-0162 ENSAMEP00000015022.1 Ailuropoda melanoleuca 30 5e-14 77.4
WERAM-Fec-0075 ENSFCAP00000006385.3 Felis catus 30 5e-14 77.4
WERAM-Anp-0127 ENSAPLP00000014113.1 Anas platyrhynchos 30 5e-14 77.4
WERAM-Ptv-0138 ENSPVAP00000011854.1 Pteropus vampyrus 30 5e-14 77.4
WERAM-Orc-0077 ENSOCUP00000020108.1 Oryctolagus cuniculus 30 5e-14 77.4
WERAM-Mup-0195 ENSMPUP00000016754.1 Mustela putorius furo 30 5e-14 77.4
WERAM-Dan-0007 ENSDNOP00000000870.3 Dasypus novemcinctus 30 5e-14 77.4
WERAM-Myl-0158 ENSMLUP00000013056.2 Myotis lucifugus 30 5e-14 77.4
WERAM-Ict-0076 ENSSTOP00000006839.2 Ictidomys tridecemlineatus 30 5e-14 77.4
WERAM-Bot-0134 ENSBTAP00000019612.5 Bos taurus 30 5e-14 77.4
WERAM-Tag-0164 ENSTGUP00000013727.1 Taeniopygia guttata 30 5e-14 77.4
WERAM-Sus-0008 ENSSSCP00000000743.2 Sus scrofa 30 5e-14 77.4
WERAM-Ova-0075 ENSOARP00000007963.1 Ovis aries 30 6e-14 77.4
WERAM-Caf-0156 ENSCAFP00000022067.4 Canis familiaris 30 6e-14 77.4
WERAM-Meg-0141 ENSMGAP00000014906.2 Meleagris gallopavo 30 6e-14 77.0
WERAM-Gaga-0128 ENSGALP00000023294.4 Gallus gallus 30 6e-14 77.0
WERAM-Orn-0112 ENSONIP00000011684.1 Oreochromis niloticus 30 6e-14 77.0
WERAM-Fia-0067 ENSFALP00000004982.1 Ficedula albicollis 30 6e-14 77.0
WERAM-Sah-0040 ENSSHAP00000004678.1 Sarcophilus harrisii 32 8e-14 76.6
WERAM-Orla-0187 ENSORLP00000021515.1 Oryzias latipes 33 1e-13 76.6
WERAM-Eqc-0182 ENSECAP00000019928.1 Equus caballus 30 1e-13 76.3
WERAM-Anc-0062 ENSACAP00000006236.3 Anolis carolinensis 32 1e-13 75.9
WERAM-Pof-0154 ENSPFOP00000012650.2 Poecilia formosa 30 2e-13 75.9
Created Date 25-Jun-2016