WERAM Information

Tag Content
WERAM ID WERAM-Sot-0012
Ensembl Protein ID PGSC0003DMT400010393
Gene Name PGSC0003DMG400004060
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PGSC0003DMG400004060 PGSC0003DMT400010393 PGSC0003DMT400010393
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 7.60e-09 37.1 145 190
Organism Solanum tuberosum
Domain Profile
  Me_Reader PHD
               PHD.txt   3 iClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                            C vC+ + ++   ++ Cd Cd+++H++Cv+l   ++peg +w+C  C 
  PGSC0003DMT400010393 145 QCNVCHSTADD-VLLLLCDLCDTAYHTYCVGLG-ATVPEG-DWFCADCA 190
                           6****655555.55*******************.9*****.*******5 PP
Protein Sequence
(Fasta)		MASDEEYTGA PEMYPSKRVK TLTLGSPESS PSSSDKGKSK LELSDSETES NCCGICLTET 60
GHGTTIIRGV IDCCDHYFCF VCIIEWSKVE SRCPMCKRRF SIIRRPPRPP IFPSERVVNV 120
PVRDQVYHCH GNATTGPRDL YAEVQCNVCH STADDVLLLL CDLCDTAYHT YCVGLGATVP 180
EGDWFCADCA LLKAEQAQSE IKTDCYTQTS FSEPQSAESA RQVSIYDIVR ESYVDGVESA 240
PNGALDASES SSRIESRRQS TSRSSSIRLG YVGKNGVAGR ATKFNARTLG HCRNVHDRIR 300
ILREHWNGFQ SGSLRFPSSK VSNASSAKLK PVRGSSSGER PLVSCSSQPR TSQPSNQNRP 360
DSKGSTEVEK AWKMMNMAKA IEQNSVGNKS SVQASKHSVQ KNTSYKEASE SSSRSISLKI 420
EQHRPTYIQN VGPGSHSESD VCKLDIRSKG ASGVYNGSSM SCRPLYSELV SSKESQTSLQ 480
PYVCDANNGL PRKNKSCAGS THLSSSIRST SISTTVGHEK EISSSSNSIV NPQEKLKVER 540
SGTKRRVEVK SDAKTEIQSL VKLNLKILCR DKKLEADTFK QVARLATHSI LAACGLEHKT 600
HGISSLPECV CVHSEEDKEL RRSTLMPKSC RECFFLFVKN VVNTILLDKR
Nucleotide Sequence
(Fasta)		TGGGCTTCTT GTGCATGTTT ACTTAGATTT GAGTCCATGG GCCCAAAGCT TTGCTCCATC 60
ATGTGCAAAG GATCATTTTA TCTGTATTCT TCTTGTTAAT GGTGAAGAAA ACAACTAACG 120
ACGGGAACAA TTCCGGCGAT TCCAATACTC CGGCTATCTA GAATTTCTTC TCAGAGATGG 180
CGTCCGACGA GGAATATACC GGAGCTCCGG AAATGTATCC AAGCAAACGT GTCAAAACCC 240
TAACCCTGGG TTCACCTGAA TCTTCCCCGT CCTCATCCGA CAAAGGCAAA TCGAAGCTTG 300
AACTTTCGGA TTCAGAGACG GAATCGAATT GCTGTGGAAT TTGCTTGACT GAAACTGGAC 360
ATGGAACAAC AATTATCAGA GGTGTTATAG ATTGTTGCGA CCATTACTTT TGCTTTGTAT 420
GTATCATAGA GTGGTCTAAA GTTGAGTCCA GATGCCCCAT GTGTAAACGC CGGTTCTCCA 480
TCATCCGCCG CCCTCCTAGA CCTCCCATTT TCCCTTCCGA ACGCGTTGTC AATGTTCCTG 540
TCCGCGATCA GGTTTATCAT TGCCATGGAA ATGCAACAAC TGGACCACGG GATCTGTATG 600
CAGAAGTGCA ATGTAACGTG TGCCACAGCA CGGCCGATGA CGTTCTCCTG CTGTTGTGTG 660
ACCTTTGTGA CACTGCTTAT CATACTTATT GTGTTGGCCT TGGTGCTACT GTTCCTGAGG 720
GCGATTGGTT TTGTGCAGAC TGCGCCCTTC TGAAGGCTGA ACAGGCCCAG AGTGAGATAA 780
AAACTGATTG CTATACCCAA ACTAGTTTCA GTGAACCCCA ATCAGCAGAA TCAGCAAGAC 840
AAGTATCTAT ATATGATATT GTACGAGAGT CTTATGTTGA TGGTGTCGAG AGCGCTCCAA 900
ATGGTGCTTT GGATGCTTCC GAGAGTTCAT CTCGTATTGA ATCTAGAAGG CAAAGTACTT 960
CTCGAAGCAG CTCAATTAGG TTAGGTTATG TAGGAAAAAA TGGTGTTGCA GGACGCGCCA 1020
CTAAGTTCAA TGCCAGAACA CTGGGGCATT GCCGCAATGT CCATGATAGG ATACGCATAT 1080
TGCGTGAACA TTGGAATGGT TTTCAAAGTG GATCCTTGAG GTTTCCTTCT AGCAAAGTGA 1140
GTAATGCTAG TAGTGCTAAA CTAAAACCAG TGCGTGGCAG CAGTTCTGGT GAACGGCCTT 1200
TAGTATCTTG CTCGAGTCAA CCAAGGACTT CTCAGCCTTC CAATCAAAAT AGACCTGACA 1260
GTAAAGGGTC AACAGAGGTG GAGAAGGCGT GGAAAATGAT GAATATGGCT AAGGCAATAG 1320
AACAAAATAG TGTCGGGAAC AAAAGTTCTG TTCAGGCCTC AAAACACTCC GTTCAGAAGA 1380
ATACTAGCTA CAAAGAAGCG AGTGAATCGA GCTCAAGGTC TATCTCACTA AAGATTGAAC 1440
AGCATCGACC TACGTATATT CAAAATGTTG GTCCAGGTAG TCATTCCGAG AGTGATGTTT 1500
GTAAGTTGGA CATTAGATCA AAAGGTGCTT CAGGTGTATA TAATGGTTCT TCAATGTCAT 1560
GCAGACCATT ATATAGTGAA CTTGTATCTT CGAAGGAGTC TCAGACTTCA CTTCAGCCAT 1620
ATGTCTGTGA TGCGAACAAT GGACTACCAC GGAAGAATAA GTCGTGTGCT GGGTCCACAC 1680
ATTTGAGTTC TTCTATCAGG TCGACATCAA TTTCTACTAC TGTAGGTCAT GAGAAAGAGA 1740
TCAGTTCTTC CTCGAATAGC ATTGTGAATC CTCAGGAGAA ACTGAAGGTC GAAAGGAGTG 1800
GCACTAAGAG AAGGGTTGAG GTGAAATCTG ATGCTAAGAC TGAGATCCAA TCTCTTGTGA 1860
AGCTCAACCT GAAAATCCTG TGCAGAGATA AAAAGCTCGA AGCTGACACA TTTAAGCAAG 1920
TTGCAAGACT AGCTACTCAT TCCATCTTAG CTGCTTGTGG TCTGGAGCAC AAAACACATG 1980
GTATTTCTTC CCTTCCAGAA TGCGTGTGTG TCCACAGCGA GGAAGATAAG GAACTCAGGA 2040
GATCTACTCT AATGCCTAAA TCGTGCCGAG AATGTTTCTT CTTATTTGTG AAGAATGTGG 2100
TGAATACTAT ACTGCTAGAC AAGAGATGAC AGGATTGGTA GTTTGCAACA CCATTAGACA 2160
TTTGCCTATA CTTCTTTATA GGTCAGAATT ATACCATAGA TAAATTAGTT CAGGGGAAAT 2220
ATTTATCATT TTAGTGGGCT ATTCAGTGTT CTGTAGACAT TTTGTAAAAC ATAATTGTAC 2280
CTGTTATGTT TGGTAAATGG CTAAC 2306
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sol-0081 Solyc06g069360.2.1 Solanum lycopersicum 92 0.0 1021
WERAM-Viv-0106 VIT_17s0000g04770.t01 Vitis vinifera 47 2e-62 238
WERAM-Thc-0032 EOY22178 Theobroma cacao 47 3e-59 227
WERAM-Mua-0056 GSMUA_Achr3P10630_001 Musa acuminata 46 1e-48 191
WERAM-Glm-0222 GLYMA17G08986.1 Glycine max 42 8e-48 189
WERAM-Sei-0024 Si005926m Setaria italica 37 6e-42 169
WERAM-Orp-0061 OPUNC06G10470.1 Oryza punctata 36 5e-40 163
WERAM-Brd-0022 BRADI1G43590.1 Brachypodium distachyon 37 3e-39 160
WERAM-Ors-0056 OS06T0283200-01 Oryza sativa 36 6e-39 159
WERAM-Orr-0064 ORUFI06G11520.1 Oryza rufipogon 36 6e-39 159
WERAM-Orgl-0062 OGLUM06G11810.1 Oryza glumaepatula 36 7e-39 159
WERAM-Orb-0063 OBART06G10900.1 Oryza barthii 36 7e-39 159
WERAM-Org-0065 ORGLA06G0243800.1 Oryza glaberrima 36 9e-39 159
WERAM-Ori-0073 BGIOSGA022703-PA Oryza indica 35 2e-38 158
WERAM-Orni-0059 ONIVA06G12720.1 Oryza nivara 35 2e-38 157
WERAM-Orm-0061 OMERI06G12780.1 Oryza meridionalis 35 3e-38 157
WERAM-Sob-0132 Sb10g010430.1 Sorghum bicolor 33 6e-38 156
WERAM-Zem-0052 GRMZM2G071613_P01 Zea mays 34 4e-37 154
WERAM-Hov-0023 MLOC_17917.1 Hordeum vulgare 50 1e-34 145
WERAM-Lep-0064 LPERR06G09560.1 Leersia perrieri 33 3e-34 144
WERAM-Pot-0057 POPTR_0005s02090.1 Populus trichocarpa 38 1e-29 128
WERAM-Php-0092 PP1S38_221V6.1 Physcomitrella patens 53 5e-29 127
WERAM-Amt-0067 ERN16814 Amborella trichopoda 51 3e-28 124
WERAM-Prp-0033 EMJ09913 Prunus persica 45 3e-28 124
WERAM-Arl-0070 fgenesh2_kg.3__ 559__ AT3G05670.1 Arabidopsis lyrata 48 9e-28 122
WERAM-Met-0163 AES82399 Medicago truncatula 45 1e-27 122
WERAM-Art-0065 AT3G05670.1 Arabidopsis thaliana 48 1e-27 122
WERAM-Bro-0104 Bo5g145160.1 Brassica oleracea 52 3e-27 121
WERAM-Sem-0082 EFJ16569 Selaginella moellendorffii 54 2e-26 118
WERAM-Tru-0040 TRIUR3_19750-P1 Triticum urartu 46 3e-26 117
WERAM-Brr-0007 Bra001159.1-P Brassica rapa 50 5e-26 117
WERAM-Tra-0137 Traes_4AS_3FEDC3E8F.2 Triticum aestivum 47 8e-26 116
WERAM-Orl-0025 KN538743.1_FGP047 Oryza longistaminata 42 2e-25 115
WERAM-Aet-0013 EMT05198 Aegilops tauschii 46 3e-25 114
WERAM-Orbr-0091 OB07G32650.1 Oryza brachyantha 52 3e-25 114
WERAM-Osl-0017 ABO99782 Ostreococcus lucimarinus 34 9e-10 63.2
WERAM-Leo-0004 ENSLOCP00000000547.1 Lepisosteus oculatus 30 1e-07 56.2
WERAM-Xet-0040 ENSXETP00000013295.2 Xenopus tropicalis 36 3e-07 54.3
WERAM-Trr-0015 EGR52231 Trichoderma reesei 35 8e-07 53.1
WERAM-Pof-0251 ENSPFOP00000026236.1 Poecilia formosa 32 2e-06 52.0
WERAM-Orn-0180 ENSONIP00000018332.1 Oreochromis niloticus 31 3e-06 51.2
WERAM-Trv-0002 EHK24588 Trichoderma virens 33 4e-06 51.2
WERAM-Fuo-0009 FOXG_02070P0 Fusarium oxysporum 30 5e-06 50.4
WERAM-Xim-0190 ENSXMAP00000015137.1 Xiphophorus maculatus 31 5e-06 50.4
WERAM-Dar-0171 ENSDARP00000105056.1 Danio rerio 31 7e-06 50.1
Created Date 25-Jun-2016