WERAM Information

Tag Content
WERAM ID WERAM-Brr-0007
Ensembl Protein ID Bra001159.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra001159 Bra001159.1 Bra001159.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.70e-10 41.9 96 142
Organism Brassica rapa
Domain Profile
  Me_Reader PHD
        PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                    tiC  C++ +++   m+ Cd Cd   H++Cv+l  +++peg +wyC+ C+
  Bra001159.1-P  96 TICSECHQGEDD-GLMLLCDLCDSSAHTYCVGLG-REVPEG-NWYCEVCR 142
                    79****655555.45*******************.******.*******8 PP
Protein Sequence
(Fasta)		MKNVCGICLS EEDMRRLKGT LDCCSHYFCF TCIMEWSKVE SRCPLCKQRF RTISKPARST 60
PGVDLREVLI PVPERDQVYQ PTEEELRSYL DPYENTICSE CHQGEDDGLM LLCDLCDSSA 120
HTYCVGLGRE VPEGNWYCEV CRPVALGSAS SQTHTTSEQQ GVSGFYTRPS PLVVSGQYQD 180
PSLLVSPRTP FSNGEYLFSS RLPNSDVQGS SPSGLGATTL SRRRTLHRHI QNIINGDRLV 240
NMGSGGGGTS MIANSSDGFA STQIGHGRER EAPQPSLQTG MSLYTISEER LPNNNPLISA 300
HEPELLSSRL DHFGSVEAVG RFPSDIFHGN RPSDLGLHHG LAQGEPLFGN QQHLRGYMPN 360
TMPFTGGEQL QQRVSAHLKN LSRQINLGQA TFDEIATCSL HTILAACGLE HKSSEVHLVP 420
PPVTCLHDDM RPCSSSSNNS SSSLMKGCCY SCFDSFVEDV VKMILDTRQP HWLRLGLH 478
Nucleotide Sequence
(Fasta)		ATGAAAAACG TTTGTGGGAT TTGTCTGTCT GAAGAAGACA TGCGAAGATT GAAGGGAACA 60
CTGGACTGTT GTAGTCATTA CTTTTGCTTC ACATGCATAA TGGAGTGGTC GAAAGTAGAA 120
TCTCGATGCC CTTTATGCAA GCAGCGGTTC AGAACAATCA GTAAACCAGC AAGATCTACA 180
CCTGGAGTTG ATTTGAGAGA AGTTCTGATA CCTGTACCTG AACGGGATCA GGTCTATCAA 240
CCGACTGAGG AAGAGTTGAG GAGTTATCTT GATCCCTATG AAAATACAAT ATGTTCTGAA 300
TGTCACCAAG GTGAAGATGA TGGGCTTATG TTGCTTTGTG ATCTCTGTGA TTCATCTGCA 360
CATACGTACT GCGTTGGACT CGGGAGGGAA GTGCCTGAAG GAAACTGGTA CTGTGAAGTT 420
TGCAGACCTG TTGCACTTGG ATCAGCTAGT TCCCAAACGC ATACTACATC TGAGCAACAA 480
GGGGTCAGTG GCTTTTATAC TAGACCATCA CCTCTTGTAG TTTCAGGGCA ATATCAAGAT 540
CCGTCTTTGC TAGTCTCCCC ACGTACACCA TTCTCCAATG GAGAGTACCT TTTTTCTTCA 600
AGGCTCCCTA ATAGTGATGT TCAAGGCTCT TCTCCTTCCG GCTTAGGAGC AACGACGTTA 660
TCAAGACGAA GGACGCTTCA TAGACACATA CAAAACATTA TCAACGGTGA TAGGCTTGTT 720
AATATGGGAA GTGGAGGTGG TGGAACATCG ATGATTGCTA ACTCGAGTGA TGGTTTCGCG 780
TCTACACAAA TTGGTCATGG CAGAGAAAGA GAAGCGCCTC AACCTTCACT ACAAACAGGG 840
ATGTCGTTGT ATACAATCTC TGAGGAAAGA CTACCGAATA ACAATCCGTT GATATCTGCC 900
CATGAACCTG AGCTTTTGTC TTCAAGGTTG GATCATTTTG GAAGCGTAGA AGCAGTAGGA 960
CGTTTCCCTA GTGATATATT TCATGGTAAT CGACCTAGCG ATTTAGGATT GCATCATGGA 1020
CTGGCTCAGG GTGAACCCTT GTTTGGTAAT CAACAACATC TACGTGGCTA CATGCCAAAC 1080
ACAATGCCTT TCACTGGAGG AGAACAACTG CAACAAAGAG TTAGTGCCCA TCTCAAGAAC 1140
TTGTCCCGTC AAATTAACTT AGGTCAAGCT ACGTTTGACG AGATTGCCAC GTGCTCATTA 1200
CACACGATAC TGGCAGCTTG TGGGCTGGAA CACAAGAGCA GTGAAGTCCA CCTTGTTCCG 1260
CCGCCAGTGA CGTGTCTTCA CGATGATATG AGACCTTGCA GCAGCAGTAG CAACAACAGC 1320
AGCAGCAGCC TGATGAAAGG GTGTTGCTAT TCATGCTTTG ATTCATTTGT AGAAGATGTA 1380
GTTAAGATGA TTCTGGACAC AAGACAACCC CATTGGTTGA GGTTAGGGCT CCACTAA 1438
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0052 Bo3g059060.1 Brassica oleracea 89 0.0 801
WERAM-Arl-0070 fgenesh2_kg.3__ 559__ AT3G05670.1 Arabidopsis lyrata 83 0.0 742
WERAM-Art-0065 AT3G05670.1 Arabidopsis thaliana 82 0.0 736
WERAM-Thc-0069 EOY11588 Theobroma cacao 54 2e-121 433
WERAM-Prp-0033 EMJ09913 Prunus persica 51 4e-107 385
WERAM-Pot-0057 POPTR_0005s02090.1 Populus trichocarpa 50 1e-105 380
WERAM-Glm-0263 GLYMA20G38280.2 Glycine max 51 1e-104 377
WERAM-Met-0163 AES82399 Medicago truncatula 49 3e-96 349
WERAM-Viv-0088 VIT_14s0060g01560.t01 Vitis vinifera 48 2e-93 340
WERAM-Sot-0077 PGSC0003DMT400063610 Solanum tuberosum 56 4e-66 249
WERAM-Sol-0016 Solyc01g100130.2.1 Solanum lycopersicum 56 2e-65 247
WERAM-Mua-0020 GSMUA_Achr11P05300_001 Musa acuminata 58 4e-55 213
WERAM-Tra-0145 Traes_4BL_8C7E52871.1 Triticum aestivum 61 1e-52 204
WERAM-Hov-0015 MLOC_14271.1 Hordeum vulgare 61 1e-52 204
WERAM-Brd-0005 BRADI1G16820.1 Brachypodium distachyon 55 2e-52 204
WERAM-Tru-0008 TRIUR3_05205-P1 Triticum urartu 54 2e-52 204
WERAM-Orb-0033 OBART03G14320.1 Oryza barthii 56 3e-52 203
WERAM-Orr-0033 ORUFI03G14970.1 Oryza rufipogon 56 4e-52 202
WERAM-Ors-0029 OS03T0302200-01 Oryza sativa 56 4e-52 202
WERAM-Orgl-0035 OGLUM03G14420.1 Oryza glumaepatula 56 5e-52 202
WERAM-Aet-0011 EMT16085 Aegilops tauschii 54 5e-52 202
WERAM-Ori-0040 BGIOSGA012447-PA Oryza indica 56 5e-52 202
WERAM-Orl-0025 KN538743.1_FGP047 Oryza longistaminata 56 5e-52 202
WERAM-Orni-0027 ONIVA02G38590.1 Oryza nivara 56 7e-52 202
WERAM-Zem-0156 GRMZM5G889372_P01 Zea mays 49 1e-51 201
WERAM-Orbr-0091 OB07G32650.1 Oryza brachyantha 55 1e-51 201
WERAM-Orm-0036 OMERI03G13080.1 Oryza meridionalis 60 1e-51 201
WERAM-Sei-0129 Si034380m Setaria italica 72 2e-51 201
WERAM-Orp-0031 OPUNC03G13830.1 Oryza punctata 61 2e-51 200
WERAM-Lep-0082 LPERR07G23890.1 Leersia perrieri 56 5e-51 199
WERAM-Org-0082 ORGLA07G0215100.1 Oryza glaberrima 55 6e-51 199
WERAM-Amt-0067 ERN16814 Amborella trichopoda 56 9e-50 195
WERAM-Php-0092 PP1S38_221V6.1 Physcomitrella patens 62 5e-41 166
WERAM-Sem-0071 EFJ32280 Selaginella moellendorffii 54 5e-37 152
WERAM-Sob-0132 Sb10g010430.1 Sorghum bicolor 54 1e-33 141
WERAM-Osl-0017 ABO99782 Ostreococcus lucimarinus 40 4e-17 87.0
WERAM-Pof-0251 ENSPFOP00000026236.1 Poecilia formosa 32 9e-10 62.4
WERAM-Gaga-0165 ENSGALP00000038228.2 Gallus gallus 34 3e-09 60.8
WERAM-Anc-0159 ENSACAP00000014763.2 Anolis carolinensis 32 8e-09 59.3
WERAM-Meg-0098 ENSMGAP00000009424.2 Meleagris gallopavo 33 9e-09 59.3
WERAM-Cii-0005 ENSCINP00000001413.3 Ciona intestinalis 34 1e-08 58.5
WERAM-Fuo-0009 FOXG_02070P0 Fusarium oxysporum 29 3e-08 57.8
WERAM-Loa-0135 ENSLAFP00000027656.1 Loxodonta africana 33 3e-08 57.4
WERAM-Fia-0150 ENSFALP00000012642.1 Ficedula albicollis 33 3e-08 57.4
WERAM-Cis-0014 ENSCSAVP00000002802.1 Ciona savignyi 33 1e-07 55.1
WERAM-Pem-0080 ENSPMAP00000008742.1 Petromyzon marinus 33 2e-07 54.7
WERAM-Prc-0102 ENSPCAP00000009508.1 Procavia capensis 32 2e-07 54.7
WERAM-Eqc-0056 ENSECAP00000007535.1 Equus caballus 36 3e-07 54.3
WERAM-Fec-0186 ENSFCAP00000018249.1 Felis catus 34 3e-07 53.9
WERAM-Mod-0091 ENSMODP00000013694.3 Monodelphis domestica 36 4e-07 53.9
WERAM-Paa-0036 ENSPANP00000002388.1 Papio anubis 34 6e-07 53.1
WERAM-Mam-0030 ENSMMUP00000005353.2 Macaca mulatta 33 8e-07 52.8
WERAM-Aim-0117 ENSAMEP00000011151.1 Ailuropoda melanoleuca 35 8e-07 52.8
WERAM-Gaa-0113 ENSGACP00000014875.1 Gasterosteus aculeatus 30 8e-07 52.8
WERAM-Ict-0170 ENSSTOP00000017980.1 Ictidomys tridecemlineatus 31 8e-07 52.8
WERAM-Chs-0134 ENSCSAP00000007118.1 Chlorocebus sabaeus 34 8e-07 52.8
WERAM-Mup-0093 ENSMPUP00000008765.1 Mustela putorius furo 34 9e-07 52.4
WERAM-Myl-0063 ENSMLUP00000005215.2 Myotis lucifugus 32 9e-07 52.4
WERAM-Nol-0083 ENSNLEP00000010240.1 Nomascus leucogenys 34 1e-06 51.6
WERAM-Caf-0077 ENSCAFP00000009790.3 Canis familiaris 34 2e-06 51.6
WERAM-Trr-0015 EGR52231 Trichoderma reesei 33 2e-06 51.6
WERAM-Mim-0048 ENSMICP00000004622.1 Microcebus murinus 32 2e-06 51.6
WERAM-Sus-0205 ENSSSCP00000027610.1 Sus scrofa 35 2e-06 51.2
WERAM-Ptv-0064 ENSPVAP00000006487.1 Pteropus vampyrus 33 2e-06 51.2
WERAM-Hos-0266 ENSP00000483129.1 Homo sapiens 34 2e-06 51.2
WERAM-Ved-0025 EGY15073 Verticillium dahliae 30 2e-06 51.2
WERAM-Pat-0024 ENSPTRP00000048336.3 Pan troglodytes 36 2e-06 51.2
WERAM-Mum-0156 ENSMUSP00000101648.2 Mus musculus 35 3e-06 50.4
WERAM-Dan-0180 ENSDNOP00000022618.1 Dasypus novemcinctus 45 4e-06 50.4
WERAM-Gog-0097 ENSGGOP00000008144.2 Gorilla gorilla 33 6e-06 49.7
Created Date 25-Jun-2016