WERAM Information


Tag Content
WERAM ID WERAM-Pes-0092
Ensembl Protein ID ENSPSIP00000011240.1
Gene Name CHD3
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSPSIG00000010177.1 ENSPSIT00000011296.1 ENSPSIP00000011240.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 3.70e-20 71.9 111 232
Me_Reader DCD 2.50e-32 97.7 267 322
Organism Pelodiscus sinensis
Domain Profile
  Me_Reader PHD

               PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
++C vC +++ + ++ Cd+C++++Hl C++++l ++peg +w Cp+C++
ENSPSIP00000011240.1 111 DYCEVC-QQGGE---IILCDTCPRAYHLVCLDPELDKAPEG-KWSCPHCEK 156
69****.55444...9*************************.*******87 PP
PHD.txt 2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51
++C+vC kd+ + +++Cd C +H++C+++pl ++p+g +w+Cp+C+
ENSPSIP00000011240.1 188 EYCRVC-KDGGE---LLCCDACISSYHIHCLNPPLPEIPNG-EWLCPRCT 232
69****.66665...9*************************.*******7 PP

  Me_Reader DCD

          Chromo-1.txt   1 evvekvldgrvekgeveylvKWkGmsyihntWeseeqLelqcrvllrnYqkkndedeep 59 
e+++k l+gr e+e++vKW G sy+h++W +e+qLe + v++rnYq+knd+de+p
ENSPSIP00000011240.1 267 EPSPKALQGRS---EREFFVKWVGQSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPP 322
699********...*******************************************98 PP
Chromo-1.txt 3 vekvldgrv.ekgeveylvKWkGmsyihntWesee 36
+ +++++ + +kg++ ylvKW+++ y tWe +e
ENSPSIP00000011240.1 364 IHRIINHSIdKKGNYHYLVKWRDLPYDQSTWEEDE 398
456666666799********************876 PP

Protein Sequence
(Fasta)
MKRKMKGKRM APLKIKLGMI GGKRKKSSSS EEVGEMEEES DIDNSSVHSS SVRSDSSGRV 60
KKLKRGRPGR KRKKAISTIP IQDRSPMVLG TAQTHVTGEE EVDGYETDHQ DYCEVCQQGG 120
EIILCDTCPR AYHLVCLDPE LDKAPEGKWS CPHCEKEGVQ WEAKEEDEEY EEELEEEGEK 180
EEEDDHMEYC RVCKDGGELL CCDACISSYH IHCLNPPLPE IPNGEWLCPR CTCPVLKGRV 240
QKILHWRWGE PPPPVLVPRP PDTGPDEPSP KALQGRSERE FFVKWVGQSY WHCSWAKELQ 300
LEIFHLVMYR NYQRKNDMDE PPPLDYGSGD DDGKSEKRKS KDPLYAQMEE RFYRYGIKPE 360
WMAIHRIINH SIDKKGNYHY LVKWRDLPYD QSTWEEDEMA IPDFDFHKHA YWRHRELIMG 420
EDPAQPRKYK KKKKEMPSEG PPNSPTNDPT VKYETQPRFI TSTGGTLHMY QLEGLNWLPF 480
SWAQGTDTIL ADEMGLGKTI QTIVFLYSLY KEGHTKGPFL VSAPLSTIIN WEREFQMWAP 540
KFYVVTYTGD KDSRSIIREN EFSFEDNAMK GGKKAFKMKR EAQVKFHVLL TSYELVTIDQ 600
AALGSIRWAC LVVDEAHRLK NNQSKFFRVL NGYKIDHKLL LTGTPLQNNL EELFHLLNFL 660
TPERFNNLEG FLEEFADISK EDQIKKLHDL LGPHMLRRLK ADVFKNMPAK TELIVRVELS 720
PMQKKYYKYI LTRNFEALNS RGGGNQVSLL NIMMDLKKCC NHPYLFPVAA MESPKLPSGA 780
YEGGALIKSS GKLMLLQKML RKLKEQGHRV LIFSQMTKML DLLEDFLDYE GYKYERIDGG 840
ITGTLRQEAI DRFNAPGAQQ FCFLLSTRAG GLGINLATAD TVIIFDSDWN PHNDIQAFSR 900
AHRIGQANKV MIYRFVTRAS VEERITQVAK RKMMLTHLVV RPGLGSKAGS MSKQELDDIL 960
KFGTEELFKD ENEGENKEED SSVIHYDNEA IARLLDRNQD ATDDADVQNM NEYLSSFKVA 1020
QYVVREEDKI EEIEREIIKQ EENVDPDYWE KLLRHHYEQQ QEDLARNLGK GKRVRKQVNY 1080
NDAAQEDQGQ HSLIGACGAL GRAGLAGAVG QE 1112
Nucleotide Sequence
(Fasta)
AAATGAAGCC GCGATTAAAA TAATCGCGGC TTCATTTCCC TCCGCCGATC TGGCTAATCT 60
ACATGCCTCC GTCGACGGAG GCATGTAGTC TAGACACACC CCTGGATTCT CTCCCCAGCT 120
ACTTGCAATG TAACCACAGG CAAGTCCCTG TCTCGTGCCT CAGTTTCTCC TTCTGGGACA 180
AGAGGCTAGC CCTGCCTGTC TAAAAGGTGG ATTTGGAAAC CATTGACTGA TCTAGCATCC 240
TTTGACCAAA GGGCCGGGTC ACAAAAGGCG GAGCAAGAGC CCTCGTGTGC CGGAGATGAA 300
GAGGAAGATG AAAGGGAAGA GGATGGCTCC GCTGAAGATC AAGCTGGGCA TGATCGGAGG 360
CAAGCGCAAG AAGAGTAGCT CGAGCGAGGA AGTGGGCGAG ATGGAGGAAG AGTCCGATAT 420
TGACAACTCC AGTGTCCACA GCTCCTCGGT GCGGTCTGAC AGCTCAGGGC GCGTCAAGAA 480
ACTCAAGCGT GGCCGGCCAG GCCGGAAAAG GAAGAAGGCA ATCTCCACCA TCCCAATCCA 540
GGATCGGAGC CCCATGGTGC TGGGCACTGC ACAGACACAT GTGACCGGAG AGGAGGAAGT 600
GGATGGCTAC GAGACAGACC ACCAGGACTA CTGCGAAGTG TGTCAGCAGG GTGGTGAGAT 660
CATCCTCTGT GACACCTGCC CCAGGGCCTA CCACCTGGTT TGCCTGGATC CCGAACTCGA 720
CAAGGCGCCT GAGGGCAAAT GGAGCTGCCC TCACTGCGAG AAGGAAGGGG TTCAGTGGGA 780
GGCCAAGGAG GAGGACGAGG AGTATGAGGA AGAGCTGGAG GAGGAGGGTG AGAAGGAGGA 840
GGAGGATGAC CACATGGAGT ACTGCCGGGT CTGCAAGGAT GGCGGGGAAC TGTTGTGCTG 900
TGATGCCTGC ATCTCATCCT ACCACATCCA CTGCCTTAAC CCGCCGCTGC CTGAGATCCC 960
CAATGGGGAA TGGCTCTGCC CTCGATGCAC GTGCCCCGTG CTAAAGGGCC GTGTGCAGAA 1020
GATCCTGCAC TGGCGCTGGG GAGAGCCACC CCCACCTGTG CTGGTGCCCC GGCCGCCTGA 1080
TACTGGCCCA GATGAGCCCT CGCCCAAGGC GCTGCAGGGG CGCTCGGAGC GGGAATTCTT 1140
TGTCAAGTGG GTCGGCCAGT CCTACTGGCA CTGCTCCTGG GCCAAGGAAC TGCAGCTGGA 1200
GATCTTCCAC CTGGTGATGT ACCGCAACTA CCAGCGGAAG AACGATATGG ACGAGCCGCC 1260
CCCGCTGGAC TATGGCTCTG GCGATGATGA CGGCAAGAGT GAGAAGCGGA AGAGCAAGGA 1320
CCCGCTCTAC GCCCAGATGG AGGAGAGGTT CTACCGCTAT GGCATCAAGC CCGAGTGGAT 1380
GGCCATCCAC CGCATCATCA ACCACAGCAT CGACAAAAAA GGGAACTACC ACTACCTGGT 1440
GAAATGGCGC GACCTGCCTT ACGACCAGTC CACGTGGGAG GAGGACGAGA TGGCCATTCC 1500
TGACTTTGAC TTCCACAAGC ATGCCTACTG GAGACACAGG GAGCTGATCA TGGGTGAGGA 1560
CCCGGCCCAG CCCCGGAAGT ACAAGAAAAA GAAGAAAGAG ATGCCATCGG AGGGCCCCCC 1620
AAATTCCCCC ACCAACGATC CCACGGTGAA GTACGAGACC CAGCCGCGCT TCATCACCTC 1680
CACGGGCGGG ACCCTGCACA TGTACCAGCT GGAGGGGCTG AACTGGCTGC CCTTCTCCTG 1740
GGCCCAGGGC ACTGACACCA TCCTGGCTGA CGAGATGGGC CTCGGCAAGA CCATCCAGAC 1800
CATTGTCTTC CTCTACTCTC TCTACAAGGA GGGTCACACC AAAGGCCCCT TCCTGGTCAG 1860
CGCCCCCCTC TCCACCATCA TTAACTGGGA GCGGGAGTTC CAGATGTGGG CACCCAAGTT 1920
CTACGTGGTG ACCTACACGG GTGACAAGGA CAGCCGCTCC ATCATCCGCG AGAACGAGTT 1980
CTCCTTCGAG GACAACGCCA TGAAGGGGGG CAAGAAGGCC TTCAAGATGA AGAGGGAAGC 2040
TCAGGTGAAA TTCCATGTGC TGCTCACCTC CTACGAGCTG GTCACCATAG ACCAGGCGGC 2100
GCTGGGCTCT ATCCGCTGGG CCTGCCTGGT GGTGGACGAG GCACACCGGC TGAAGAACAA 2160
CCAGTCCAAG TTCTTCAGGG TGCTGAACGG TTACAAGATC GACCACAAAC TGCTGTTGAC 2220
GGGGACACCA CTGCAGAATA ACCTAGAGGA GCTGTTCCAC CTGCTCAACT TCCTCACGCC 2280
CGAGCGCTTC AATAACCTGG AAGGCTTCCT GGAGGAATTT GCTGACATCT CCAAGGAAGA 2340
CCAGATCAAG AAGCTGCATG ACCTGCTGGG CCCTCACATG CTGCGGCGCC TTAAGGCTGA 2400
TGTCTTCAAG AACATGCCTG CCAAGACGGA GCTGATTGTG CGCGTCGAGC TGAGCCCCAT 2460
GCAGAAGAAA TACTACAAAT ACATCCTGAC CCGCAACTTT GAAGCCCTGA ACTCCCGGGG 2520
CGGTGGCAAC CAGGTCTCCC TGCTCAATAT CATGATGGAT CTCAAGAAGT GCTGTAACCA 2580
CCCCTACCTC TTCCCCGTGG CTGCTATGGA ATCTCCCAAG CTGCCCAGTG GTGCCTACGA 2640
GGGCGGTGCC CTCATCAAAT CCTCCGGGAA GCTCATGCTG TTACAGAAGA TGCTGCGGAA 2700
ACTGAAGGAG CAAGGCCACC GGGTGCTGAT TTTCTCTCAG ATGACTAAAA TGCTGGACCT 2760
GCTGGAGGAT TTCCTGGACT ACGAAGGCTA CAAGTACGAG CGGATTGACG GTGGGATCAC 2820
TGGGACCTTG CGGCAAGAGG CCATTGACAG ATTCAATGCT CCTGGGGCCC AGCAGTTTTG 2880
CTTCCTGCTT TCGACCCGAG CAGGAGGCCT GGGCATCAAC CTGGCCACTG CAGACACGGT 2940
GATCATCTTT GATTCAGACT GGAACCCCCA CAACGACATT CAGGCCTTCA GCAGGGCTCA 3000
CCGCATTGGC CAGGCCAACA AGGTGATGAT CTACCGGTTC GTCACAAGGG CCTCAGTGGA 3060
GGAGCGCATC ACGCAGGTAG CCAAGCGGAA GATGATGCTG ACGCACCTGG TGGTGCGCCC 3120
CGGGCTGGGC TCTAAGGCTG GCAGCATGTC CAAGCAGGAG CTGGATGACA TCCTCAAGTT 3180
TGGCACCGAG GAGCTCTTCA AGGATGAGAA TGAGGGGGAG AACAAGGAGG AGGATAGCAG 3240
CGTGATCCAC TATGACAACG AGGCCATCGC CCGGCTGCTG GATCGCAACC AGGATGCCAC 3300
CGATGATGCT GATGTGCAGA ACATGAACGA GTATCTGAGC TCCTTCAAGG TGGCCCAGTA 3360
TGTAGTGCGG GAGGAGGACA AGATTGAGGA GATCGAGCGG GAGATCATTA AGCAGGAGGA 3420
GAACGTGGAC CCTGACTACT GGGAGAAGCT GCTGAGGCAT CACTATGAGC AGCAGCAGGA 3480
GGACCTGGCC AGGAACCTGG GGAAGGGGAA ACGGGTACGG AAACAGGTCA ACTACAATGA 3540
TGCTGCACAG GAGGACCAAG GTCAGCACTC ATTGATTGGT GCCTGCGGTG CCCTGGGCAG 3600
GGCTGGGCTG GCAGGGGCTG TGGGACAGGA GTGA 3635
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Mod-0059 ENSMODP00000030757.4 Monodelphis domestica 89 0.0 1759
WERAM-Ict-0185 ENSSTOP00000015560.1 Ictidomys tridecemlineatus 95 0.0 1752
WERAM-Mup-0094 ENSMPUP00000008791.1 Mustela putorius furo 89 0.0 1751
WERAM-Chs-0137 ENSCSAP00000007332.1 Chlorocebus sabaeus 95 0.0 1751
WERAM-Loa-0007 ENSLAFP00000000480.3 Loxodonta africana 95 0.0 1749
WERAM-Ova-0188 ENSOARP00000019164.1 Ovis aries 94 0.0 1749
WERAM-Anc-0038 ENSACAP00000004315.3 Anolis carolinensis 93 0.0 1749
WERAM-Pat-0070 ENSPTRP00000014854.3 Pan troglodytes 95 0.0 1748
WERAM-Myl-0162 ENSMLUP00000013342.2 Myotis lucifugus 95 0.0 1748
WERAM-Hos-0192 ENSP00000332628.7 Homo sapiens 95 0.0 1748
WERAM-Sus-0145 ENSSSCP00000019030.2 Sus scrofa 94 0.0 1748
WERAM-Fec-0106 ENSFCAP00000008931.3 Felis catus 94 0.0 1747
WERAM-Ran-0063 ENSRNOP00000053890.4 Rattus norvegicus 94 0.0 1747
WERAM-Mum-0025 ENSMUSP00000090649.6 Mus musculus 94 0.0 1746
WERAM-Gog-0151 ENSGGOP00000013179.2 Gorilla gorilla 95 0.0 1746
WERAM-Bot-0130 ENSBTAP00000019119.5 Bos taurus 94 0.0 1746
WERAM-Caj-0148 ENSCJAP00000027281.2 Callithrix jacchus 95 0.0 1745
WERAM-Sah-0162 ENSSHAP00000016947.1 Sarcophilus harrisii 94 0.0 1744
WERAM-Caf-0178 ENSCAFP00000024834.4 Canis familiaris 94 0.0 1744
WERAM-Cap-0190 ENSCPOP00000016647.1 Cavia porcellus 94 0.0 1743
WERAM-Nol-0104 ENSNLEP00000011902.1 Nomascus leucogenys 95 0.0 1741
WERAM-Otg-0044 ENSOGAP00000002873.2 Otolemur garnettii 94 0.0 1739
WERAM-Orc-0212 ENSOCUP00000018080.1 Oryctolagus cuniculus 92 0.0 1734
WERAM-Dio-0100 ENSDORP00000010071.1 Dipodomys ordii 93 0.0 1732
WERAM-Ocp-0105 ENSOPRP00000010147.1 Ochotona princeps 93 0.0 1719
WERAM-Poa-0070 ENSPPYP00000008928.1 Pongo abelii 92 0.0 1676
WERAM-Mam-0202 ENSMMUP00000029252.2 Macaca mulatta 91 0.0 1647
WERAM-Eqc-0062 ENSECAP00000008810.1 Equus caballus 95 0.0 1616
WERAM-Paa-0191 ENSPANP00000019652.1 Papio anubis 95 0.0 1614
WERAM-Tut-0120 ENSTTRP00000009773.1 Tursiops truncatus 94 0.0 1597
WERAM-Ere-0132 ENSEEUP00000013928.1 Erinaceus europaeus 87 0.0 1596
WERAM-Lac-0068 ENSLACP00000009098.1 Latimeria chalumnae 83 0.0 1594
WERAM-Dar-0054 ENSDARP00000127601.1 Danio rerio 84 0.0 1587
WERAM-Leo-0141 ENSLOCP00000017225.1 Lepisosteus oculatus 86 0.0 1585
WERAM-Asm-0115 ENSAMXP00000011496.1 Astyanax mexicanus 85 0.0 1583
WERAM-Orn-0112 ENSONIP00000011684.1 Oreochromis niloticus 83 0.0 1571
WERAM-Tar-0183 ENSTRUP00000038299.1 Takifugu rubripes 83 0.0 1563
WERAM-Pof-0154 ENSPFOP00000012650.2 Poecilia formosa 82 0.0 1561
WERAM-Ten-0159 ENSTNIP00000015977.1 Tetraodon nigroviridis 82 0.0 1558
WERAM-Xim-0202 ENSXMAP00000016105.1 Xiphophorus maculatus 82 0.0 1555
WERAM-Gaa-0207 ENSGACP00000025482.1 Gasterosteus aculeatus 81 0.0 1551
WERAM-Ect-0124 ENSETEP00000014412.1 Echinops telfairi 87 0.0 1543
WERAM-Aim-0162 ENSAMEP00000015022.1 Ailuropoda melanoleuca 81 0.0 1523
WERAM-Dan-0007 ENSDNOP00000000870.3 Dasypus novemcinctus 81 0.0 1522
WERAM-Ptv-0138 ENSPVAP00000011854.1 Pteropus vampyrus 81 0.0 1517
WERAM-Orla-0187 ENSORLP00000021515.1 Oryzias latipes 79 0.0 1514
WERAM-Xet-0022 ENSXETP00000006377.3 Xenopus tropicalis 80 0.0 1509
WERAM-Gaga-0128 ENSGALP00000023294.4 Gallus gallus 81 0.0 1509
WERAM-Meg-0141 ENSMGAP00000014906.2 Meleagris gallopavo 81 0.0 1509
WERAM-Tag-0164 ENSTGUP00000013727.1 Taeniopygia guttata 81 0.0 1508
WERAM-Anp-0127 ENSAPLP00000014113.1 Anas platyrhynchos 81 0.0 1508
WERAM-Fia-0067 ENSFALP00000004982.1 Ficedula albicollis 81 0.0 1500
WERAM-Prc-0006 ENSPCAP00000000704.1 Procavia capensis 74 0.0 1387
WERAM-Mim-0084 ENSMICP00000008017.1 Microcebus murinus 87 0.0 1316
WERAM-Mae-0139 ENSMEUP00000013963.1 Macropus eugenii 80 0.0 1299
WERAM-Tub-0084 ENSTBEP00000009893.1 Tupaia belangeri 79 0.0 1258
WERAM-Gam-0169 ENSGMOP00000016904.1 Gadus morhua 78 0.0 1159
WERAM-Drm-0093 FBpp0074688 Drosophila melanogaster 61 0.0 1149
WERAM-Cis-0034 ENSCSAVP00000007438.1 Ciona savignyi 61 0.0 1105
WERAM-Ora-0020 ENSOANP00000002890.2 Ornithorhynchus anatinus 64 0.0 1086
WERAM-Cae-0002 T14G8.1 Caenorhabditis elegans 57 0.0 1063
WERAM-Tas-0061 ENSTSYP00000005557.1 Tarsius syrichta 74 0.0 1048
WERAM-Soa-0101 ENSSARP00000009501.1 Sorex araneus 84 0.0 984
WERAM-Chh-0003 ENSCHOP00000000249.1 Choloepus hoffmanni 80 0.0 939
WERAM-Sem-0031 EFJ11544 Selaginella moellendorffii 44 0.0 655
WERAM-Amt-0083 ERN02848 Amborella trichopoda 43 0.0 640
WERAM-Met-0079 AES73562 Medicago truncatula 44 0.0 638
WERAM-Prp-0013 EMJ26664 Prunus persica 43 0.0 637
WERAM-Glm-0057 GLYMA06G06720.1 Glycine max 44 0.0 634
WERAM-Php-0082 PP1S33_329V6.1 Physcomitrella patens 43 2e-180 630
WERAM-Brr-0040 Bra007814.1-P Brassica rapa 43 1e-178 625
WERAM-Viv-0017 VIT_04s0008g05880.t01 Vitis vinifera 44 2e-178 624
WERAM-Bro-0158 Bo8g099350.1 Brassica oleracea 43 4e-178 623
WERAM-Art-0045 AT2G25170.1 Arabidopsis thaliana 42 3e-177 620
WERAM-Sol-0080 Solyc06g065730.2.1 Solanum lycopersicum 44 2e-175 614
WERAM-Sei-0019 Si005700m Setaria italica 43 2e-175 613
WERAM-Arl-0023 fgenesh1_pg.C_scaffold_4000458 Arabidopsis lyrata 42 3e-175 613
WERAM-Orbr-0069 OB06G14970.1 Oryza brachyantha 43 1e-174 611
WERAM-Mua-0075 GSMUA_Achr4P21270_001 Musa acuminata 42 6e-174 609
WERAM-Orni-0056 ONIVA06G06230.1 Oryza nivara 43 6e-173 605
WERAM-Orb-0059 OBART06G05400.1 Oryza barthii 43 6e-173 605
WERAM-Org-0057 ORGLA06G0049200.1 Oryza glaberrima 43 2e-171 600
WERAM-Brd-0024 BRADI1G47367.1 Brachypodium distachyon 42 5e-170 596
WERAM-Aet-0096 EMT22305 Aegilops tauschii 42 1e-167 588
WERAM-Vip-0109 ENSVPAP00000010051.1 Vicugna pacos 97 3e-167 587
WERAM-Orgl-0059 OGLUM06G05590.1 Oryza glumaepatula 45 2e-165 581
WERAM-Ori-0068 BGIOSGA021779-PA Oryza indica 45 2e-165 581
WERAM-Orr-0060 ORUFI06G05540.1 Oryza rufipogon 45 2e-165 581
WERAM-Tra-0315 Traes_7BS_4FE42A949.1 Triticum aestivum 45 2e-164 577
WERAM-Tru-0086 TRIUR3_31334-P1 Triticum urartu 44 7e-163 572
WERAM-Hov-0079 MLOC_61346.1 Hordeum vulgare 44 1e-156 551
WERAM-Orm-0057 OMERI06G06420.1 Oryza meridionalis 42 3e-145 513
WERAM-Thc-0019 EOX96881 Theobroma cacao 41 2e-144 511
WERAM-Sob-0039 Sb02g041910.1 Sorghum bicolor 43 2e-143 508
WERAM-Pot-0009 POPTR_0001s26030.1 Populus trichocarpa 42 3e-142 503
Created Date 25-Jun-2016