WERAM Information

Tag Content
WERAM ID WERAM-Gam-0029
Ensembl Protein ID ENSGMOP00000003227.1
Gene Name CBX4
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSGMOG00000003065.1 ENSGMOT00000003327.1 ENSGMOP00000003227.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader Chromodomain 1.40e-22 79.6 10 67
Organism Gadus morhua
Domain Profile
  Me_Reader Chromodomain
      Chromodomain.txt  1 FeverivdkkelrkgeveYlVrWkGynksddtWepeenLlckelleefekkkekkkkqg 59
                          F+ve+i  k+++rkg+veYlV+W+G++++++tWepeen+l+++ll++f+ ++ +++++g
  ENSGMOP00000003227.1 10 FAVESIE-KRRNRKGRVEYLVKWRGWSPKYNTWEPEENILDPRLLDAFKDREGQDQLMG 67
                          99*****.*********************************************999887 PP
Protein Sequence
(Fasta)		ELPAAGEHVF AVESIEKRRN RKGRVEYLVK WRGWSPKYNT WEPEENILDP RLLDAFKDRE 60
GQDQLMGYRK RGPKPKHLLV QVPSFARRSS ILSDLQEASL NEDSCQKTAP IHMLHSQSQQ 120
YQLNSKKHHQ FLPLGKDAEQ QANGKKKFYY QLNSKKHHPY QPDLRMYEAP HLKPRDAKVP 180
EVANQAWNLP PALQQKWVRD KDSGCLTKVK DITMELKKLP ADLNGHKEPE KVQPSAEKDN 240
PSPPSSVSNG KLKIVKNKNK NGRIVIVMSK YMESGMKTAK IKNGDSKTVD EPTPDEESID 300
NEVEKMKLIK KLGLMNGFAK KPKDKPKVSR AEHTETDPPL EAKAQVTEQD KQEEVGGQTP 360
PLLDQPLQLT TPDRRADEAV PCLSESGRSH EGLKRQSSAM DNEDQPGGSK RFLSSRISTP 420
HTLSSPPQSA VEDQNVPGQY TNREYGYTEQ EEPIDLSVVR TRPEAVIQTE LCTETETVTQ 480
ADTETLSEPF LGNIVITDIT TNCLTVTFKE YVTA 514
Nucleotide Sequence
(Fasta)		GAGCTGCCCG CCGCGGGGGA ACACGTCTTT GCGGTGGAGA GCATCGAGAA GAGGAGGAAT 60
AGAAAGGGGA GGGTCGAATA CCTGGTCAAG TGGAGGGGAT GGTCTCCAAA GTACAACACC 120
TGGGAACCAG AAGAAAACAT CTTGGACCCA AGACTCTTGG ATGCCTTCAA AGACAGAGAA 180
GGGCAAGATC AGCTGATGGG ATATCGCAAA AGAGGACCAA AGCCCAAACA TCTTCTAGTT 240
CAGGTGCCAT CCTTTGCTCG GAGATCCAGC ATCCTGTCTG ATCTTCAGGA GGCCTCCCTG 300
AACGAGGACA GCTGTCAGAA GACGGCCCCC ATCCATATGC TGCACTCCCA GAGCCAGCAG 360
TACCAGCTGA ACAGCAAGAA GCACCACCAG TTTCTGCCAC TGGGCAAGGA CGCCGAGCAG 420
CAGGCCAATG GCAAGAAGAA GTTCTACTAC CAGCTCAACA GCAAGAAGCA CCACCCCTAC 480
CAGCCCGACC TCCGGATGTA CGAGGCCCCC CACCTGAAGC CCAGAGACGC TAAGGTTCCA 540
GAGGTGGCTA ACCAAGCCTG GAACCTTCCT CCGGCATTGC AGCAAAAGTG GGTTCGTGAC 600
AAGGACTCCG GCTGCCTGAC CAAAGTCAAG GACATCACCA TGGAGCTGAA GAAACTCCCA 660
GCGGATCTCA ATGGACATAA GGAGCCGGAG AAAGTACAGC CCTCCGCTGA GAAAGACAAT 720
CCGTCACCGC CGAGTTCTGT GAGCAACGGC AAGCTTAAGA TTGTCAAAAA CAAAAACAAG 780
AACGGACGGA TTGTTATCGT CATGAGCAAG TACATGGAGA GCGGCATGAA GACGGCAAAG 840
ATAAAGAACG GGGACTCTAA AACGGTGGAC GAGCCTACGC CCGACGAGGA GAGTATCGAC 900
AACGAGGTCG AGAAGATGAA ACTCATCAAG AAGCTCGGGC TCATGAACGG ATTTGCAAAA 960
AAACCCAAGG ACAAACCCAA AGTTTCCCGT GCTGAACATA CAGAGACGGA CCCGCCTCTT 1020
GAAGCAAAGG CCCAAGTGAC GGAGCAGGAT AAGCAGGAGG AGGTCGGGGG TCAAACACCT 1080
CCTCTATTGG ATCAGCCTTT ACAACTGACA ACCCCTGATC GGCGTGCGGA CGAGGCGGTT 1140
CCCTGCCTGT CCGAGAGTGG ACGGAGCCAT GAAGGACTCA AACGGCAGTC TTCTGCCATG 1200
GACAATGAGG ACCAACCAGG AGGCAGTAAG AGATTTTTGA GCTCCAGGAT AAGCACACCA 1260
CACACGTTGT CGTCACCACC TCAGAGTGCA GTCGAAGACC AAAATGTACC GGGTCAGTAC 1320
ACCAACCGGG AATACGGATA TACCGAGCAA GAGGAACCCA TTGATTTGAG CGTGGTGAGG 1380
ACCAGGCCTG AGGCTGTGAT CCAGACTGAA CTCTGTACGG AGACTGAAAC CGTAACACAA 1440
GCAGACACAG AAACACTGTC CGAGCCTTTC CTGGGGAATA TCGTCATTAC GGACATTACT 1500
ACTAACTGTC TCACTGTCAC GTTTAAGGAG TATGTGACGG CGTAG 1546
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Gaa-0195 ENSGACP00000024086.1 Gasterosteus aculeatus 59 3e-165 578
WERAM-Xim-0219 ENSXMAP00000017952.1 Xiphophorus maculatus 59 1e-161 566
WERAM-Pof-0200 ENSPFOP00000016491.2 Poecilia formosa 57 2e-161 566
WERAM-Orla-0019 ENSORLP00000002324.1 Oryzias latipes 59 3e-160 562
WERAM-Orn-0039 ENSONIP00000004213.1 Oreochromis niloticus 61 9e-153 537
WERAM-Tar-0020 ENSTRUP00000004308.1 Takifugu rubripes 52 1e-134 477
WERAM-Asm-0047 ENSAMXP00000006389.1 Astyanax mexicanus 47 3e-111 399
WERAM-Ten-0209 ENSTNIP00000021158.1 Tetraodon nigroviridis 47 2e-105 380
WERAM-Dar-0204 ENSDARP00000132706.1 Danio rerio 46 3e-105 379
WERAM-Lac-0174 ENSLACP00000020449.1 Latimeria chalumnae 41 7e-96 348
WERAM-Leo-0140 ENSLOCP00000017081.1 Lepisosteus oculatus 67 5e-78 289
WERAM-Xet-0083 ENSXETP00000028020.2 Xenopus tropicalis 55 2e-77 287
WERAM-Mum-0165 ENSMUSP00000026665.7 Mus musculus 55 1e-75 281
WERAM-Sus-0127 ENSSSCP00000018183.2 Sus scrofa 55 2e-75 280
WERAM-Chs-0027 ENSCSAP00000015691.1 Chlorocebus sabaeus 55 2e-75 280
WERAM-Paa-0138 ENSPANP00000016273.1 Papio anubis 55 2e-75 280
WERAM-Pat-0211 ENSPTRP00000060551.1 Pan troglodytes 55 3e-75 280
WERAM-Hos-0137 ENSP00000269397.4 Homo sapiens 55 3e-75 280
WERAM-Ict-0199 ENSSTOP00000021274.1 Ictidomys tridecemlineatus 55 4e-75 280
WERAM-Otg-0228 ENSOGAP00000015725.1 Otolemur garnettii 54 3e-73 273
WERAM-Ran-0197 ENSRNOP00000066624.1 Rattus norvegicus 69 7e-62 235
WERAM-Gog-0105 ENSGGOP00000009074.2 Gorilla gorilla 50 9e-61 232
WERAM-Bot-0095 ENSBTAP00000040225.3 Bos taurus 68 5e-60 229
WERAM-Aim-0120 ENSAMEP00000011388.1 Ailuropoda melanoleuca 70 5e-29 126
WERAM-Dan-0191 ENSDNOP00000026605.1 Dasypus novemcinctus 70 6e-29 126
WERAM-Fec-0174 ENSFCAP00000024437.1 Felis catus 70 7e-29 125
WERAM-Tut-0014 ENSTTRP00000001188.1 Tursiops truncatus 70 7e-29 125
WERAM-Mup-0151 ENSMPUP00000013148.1 Mustela putorius furo 70 7e-29 125
WERAM-Caf-0017 ENSCAFP00000001948.3 Canis familiaris 70 8e-29 125
WERAM-Dio-0093 ENSDORP00000009462.1 Dipodomys ordii 70 8e-29 125
WERAM-Mam-0061 ENSMMUP00000010301.2 Macaca mulatta 70 1e-28 125
WERAM-Pes-0116 ENSPSIP00000013945.1 Pelodiscus sinensis 69 2e-28 124
WERAM-Ova-0175 ENSOARP00000017609.1 Ovis aries 70 2e-28 124
WERAM-Anc-0080 ENSACAP00000007637.2 Anolis carolinensis 68 6e-28 123
WERAM-Gaga-0164 ENSGALP00000037077.2 Gallus gallus 69 6e-28 122
WERAM-Loa-0182 ENSLAFP00000017563.2 Loxodonta africana 71 2e-27 121
WERAM-Prc-0153 ENSPCAP00000014543.1 Procavia capensis 69 5e-27 119
WERAM-Sah-0110 ENSSHAP00000011795.1 Sarcophilus harrisii 69 2e-26 117
WERAM-Ect-0139 ENSETEP00000015740.1 Echinops telfairi 48 3e-26 117
WERAM-Cap-0215 ENSCPOP00000020733.1 Cavia porcellus 52 3e-26 117
WERAM-Tub-0039 ENSTBEP00000004995.1 Tupaia belangeri 67 4e-26 117
WERAM-Myl-0216 ENSMLUP00000018435.1 Myotis lucifugus 67 5e-26 116
WERAM-Eqc-0147 ENSECAP00000016028.1 Equus caballus 68 5e-26 116
WERAM-Caj-0191 ENSCJAP00000032804.1 Callithrix jacchus 68 5e-26 116
WERAM-Poa-0210 ENSPPYP00000024136.1 Pongo abelii 68 6e-26 116
WERAM-Mod-0074 ENSMODP00000011965.2 Monodelphis domestica 65 7e-26 115
WERAM-Nol-0003 ENSNLEP00000000196.1 Nomascus leucogenys 66 1e-25 115
WERAM-Ptv-0108 ENSPVAP00000009576.2 Pteropus vampyrus 47 1e-24 111
WERAM-Tag-0129 ENSTGUP00000010594.1 Taeniopygia guttata 68 3e-23 107
WERAM-Ere-0050 ENSEEUP00000004312.1 Erinaceus europaeus 68 6e-20 96.3
WERAM-Ora-0048 ENSOANP00000007669.2 Ornithorhynchus anatinus 71 4e-16 84.0
WERAM-Zem-0068 GRMZM2G117100_P01 Zea mays 47 1e-11 69.3
WERAM-Sei-0132 Si036395m Setaria italica 51 6e-10 63.2
WERAM-Orc-0181 ENSOCUP00000018528.2 Oryctolagus cuniculus 51 3e-08 57.4
WERAM-Chh-0115 ENSCHOP00000012258.1 Choloepus hoffmanni 51 3e-08 57.4
WERAM-Vip-0106 ENSVPAP00000009695.1 Vicugna pacos 51 3e-08 57.4
WERAM-Soa-0076 ENSSARP00000007237.1 Sorex araneus 51 3e-08 57.4
Created Date 25-Jun-2016