WERAM Information

Tag Content
WERAM ID WERAM-Asm-0113
Ensembl Protein ID ENSAMXP00000011287.1
Gene Name chd1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSAMXG00000010843.1 ENSAMXT00000011286.1 ENSAMXP00000011287.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader DCD 3.20e-31 94.1 107 124
Organism Astyanax mexicanus
Domain Profile
  Me_Reader DCD
          Chromo-1.txt  40 lqcrvllrnYqkkndedee 58 
                           +q ++l ++ q++++ +++
  ENSAMXP00000011287.1 107 QQQQQLQQQQQQQQK-QQQ 124
                           334444444333333.333 PP
          Chromo-1.txt   2 vvekvldgrv.............................ekgeveylvKWkGmsyihntWeseeqLelq.crvl..lrnYqkkndedee 58 
                           ++e+v+  r+                             ++g+v+yl+KWkG+s+ihntWe+ee+L+lq ++++  l+n++kk++++++
  ENSAMXP00000011287.1 280 TLERVMGIRIgrkgatgatttvyaveadgdpnanfnsskQPGDVQYLIKWKGWSHIHNTWETEETLKLQnVKGMkkLDNFKKKEQDKKK 368
                           7899999999999999999999999999999999999999************************************************* PP
          Chromo-1.txt  59 psk 61 
                           ++k
  ENSAMXP00000011287.1 369 WLK 371
                           986 PP
          Chromo-1.txt  12 ekgeveylvKWkGmsyihntWeseeqLelqcrvllrnYqkknded 56 
                             g  +yl KW+G+ y++++We  + ++ + ++ ++ Y+ +n+ +
  ENSAMXP00000011287.1 410 AAGYPDYLCKWQGLPYSECSWEDGALISRKFQKCIDCYMSRNQSK 454
                           567779*********************************999875 PP
Protein Sequence
(Fasta)		MDGRSEDESV SNSSGDSSNS EDESGSGSGS GSGSGSSSSS SSSSSSQSGS SDSGSGSDSG 60
SQSDSDSEKS KGKNDQDKNP AKIDTSEFWK SNPSILAVQR SAMLRKQQQQ QLQQQQQQQQ 120
KQQQQSSSNS DSDEESSSSD DSDDDSSRKK KSKGSSDSDS GSGSGSGSGS DSSDSSAEEE 180
EENSEESVSD YEPSHKVKSR KPTNKTNARN GKKSKAPKKK SAGSSSEDED DYKKALAGPR 240
RQATVNVSYK EDEELKTDSD DLLDVCGEDV PPPEEDEFET LERVMGIRIG RKGATGATTT 300
VYAVEADGDP NANFNSSKQP GDVQYLIKWK GWSHIHNTWE TEETLKLQNV KGMKKLDNFK 360
KKEQDKKKWL KSASPEDVEY FNCQQELMDD LHSQYQLVER IIGHSNQKSA AGYPDYLCKW 420
QGLPYSECSW EDGALISRKF QKCIDCYMSR NQSKTIPFRD CKVLKQRPRF MPMKKQPHYI 480
GGDGLELRDY QLDSLNWMAH SWCKGNSCIL ADEMGLGKTI QTISFLNYLF HEHQLYGPFL 540
LVVPLSTLTS WQREIHLWAP QMNVVVYLGD ISSRNMIRTH EWMHSQTKRL KFNILLTTYE 600
ILLKDKSFLG NVSWAFIGVD EAHRLKNDDS LLYKTMIDFK SNHRLLITGT PLQNSLKELW 660
SLLHFIMPEK FHSWELFEDE HGMGRDSGYT SLHKELEPFL LRRVKKDVEK SLPAKVEQIL 720
RVEMSAMQKQ YYKWILTRNY KALSKGTKGS TSGFLNIMME LKKCCNHCYL IKSPDDHDFY 780
NKAEALQHLI RSSGKLVLLD KLLVRLKERG HRVLIFSQMV RMLDILAEYL KSRQFLFQRL 840
DGSIKGEMRK QALDHFNAEG SEDFCFLLST RAGGLGINLA SADTVVIFDS DWNPQNDLQA 900
QARAHRIGQK RQVNIYRLVT KGSVEEDIIE RAKKKMVLDH LVIQRMDTTG KTVLHTGAAP 960
SSSSTPFNKE ELSAILKFGA EELFKEPEGE EQEPQEMDID EILKRAETRE NDPGPSTVGE 1020
ELLSQFKVAN FTMMEEEEID MDADGNQRNW DDIIPEEQRR RMEEEERQKE LAEIYLLPRM 1080
RNCAKQISFN GNEGRRSRNR RYSGSDSDSA SDRKRPKKRG RPRTIPRENI KGFSDAEIRR 1140
FIKSYKKFGG PLERLDAIAR DAELVDKSEH DLRRLAETVH NGCVKTLREN PCGPEKTSGG 1200
RRGKVKGPTF RISGVQVNAK LVISHEEELA PLHKAIPADP EERKRYTLPC HAKAAHFDID 1260
WGKEDDSSLL IGIYEYGYGS WEMIKMDPDL NLTHKLLPDD PDKKPQAKQL QTRADYLIKL 1320
LSKDLAKKEA QRQTGNSNSR KRKPRGKKNK AVKPKVEEVP NSLSSVPPSD KSSEDEDDKV 1380
EAKEIPTAKP AAARKTKVPD RAVKEEEEEE PESEAHVKEE KEEKETKEKE VKKEIKKEKK 1440
EEGREGKEKK EPKEKKETKP LEPVHKVEEA NSEKTLDIKA DIWEKSKKAD TPIHITAGGE 1500
TVPISEESEE LDQKTFSVCK ERMRPVKAAL KQLDRPEKGL SEREQLEHTR QCLIKIGDHI 1560
TDCLKEYSNP EQIKQWRKNL WIFVSKFTEF DARKLHKLYK HAIKKRQENA QAADQNTSTV 1620
NTQSLKHTVV HPIWSRSCDD EDIKSQDKNI GNIGIEKERR RETGGHKKPY CCFLILHTAP 1680
NILPFHRYYS DSKHRKLDDH RSSRDHWSDS SSKDRLHSDH RSHSDHRSHS EHRSSSDYSH 1740
HKPSRDYRYH SDWQMEHRAS GSGPRSPRDQ RSPYDSRSPM GHRSPFEYSS DHKSTPEQVW 1800
SSRKT 1805
Nucleotide Sequence
(Fasta)		ATGGATGGCC GAAGTGAAGA TGAAAGTGTG AGCAACAGCA GCGGAGATTC CAGTAATTCT 60
GAAGATGAAT CTGGATCTGG GTCCGGATCA GGCTCAGGTT CTGGCTCCAG TTCCAGCAGT 120
AGTAGCTCCA GTAGCAGCCA GTCAGGAAGC AGCGACTCAG GAAGTGGCTC GGATTCGGGC 180
AGCCAATCCG ACTCCGACTC GGAGAAGTCT AAGGGGAAGA ATGATCAGGA TAAAAACCCT 240
GCCAAGATTG ATACATCAGA ATTTTGGAAG TCAAATCCCA GTATCCTGGC AGTGCAGAGA 300
TCAGCCATGC TCAGGAAACA GCAGCAGCAA CAGCTTCAGC AGCAGCAACA GCAGCAGCAA 360
AAGCAGCAGC AACAGAGCTC CTCAAATAGT GACTCAGATG AGGAGTCCTC TAGCAGTGAT 420
GACTCAGATG ATGACTCTTC CAGGAAGAAA AAGAGTAAAG GGTCTTCAGA CTCTGACTCA 480
GGGTCCGGCT CTGGGTCTGG TTCAGGAAGT GACAGCTCTG ATTCTTCAGC TGAGGAAGAG 540
GAGGAGAACA GTGAAGAGTC TGTTTCAGAC TATGAGCCCA GCCACAAAGT CAAAAGCAGA 600
AAACCAACGA ACAAGACCAA TGCCAGAAAT GGGAAAAAAA GCAAGGCTCC AAAAAAGAAG 660
TCCGCAGGCT CCTCTTCTGA AGACGAGGAC GACTACAAGA AGGCTCTGGC AGGTCCTCGG 720
CGGCAGGCTA CGGTCAATGT GAGCTACAAA GAGGATGAAG AGCTGAAAAC GGACTCTGAT 780
GATCTGTTGG ACGTGTGTGG GGAGGACGTG CCCCCACCTG AGGAGGATGA ATTTGAAACG 840
CTGGAAAGAG TGATGGGCAT TAGAATAGGA CGGAAAGGAG CCACTGGGGC CACAACCACA 900
GTCTATGCTG TTGAAGCTGA CGGGGACCCC AATGCCAACT TTAACTCAAG CAAGCAGCCA 960
GGGGATGTGC AGTACCTGAT CAAATGGAAG GGCTGGTCAC ACATTCACAA TACGTGGGAG 1020
ACTGAAGAGA CGCTAAAACT GCAGAATGTG AAGGGCATGA AGAAACTGGA CAATTTCAAA 1080
AAGAAGGAGC AGGACAAAAA GAAGTGGCTC AAAAGTGCTT CACCTGAGGA TGTGGAGTAC 1140
TTCAACTGCC AGCAGGAGCT CATGGACGAC TTGCATTCGC AGTATCAGCT CGTGGAGAGA 1200
ATTATTGGTC ACTCGAATCA GAAGTCAGCA GCAGGCTACC CAGACTACTT GTGCAAATGG 1260
CAAGGCCTTC CCTATTCTGA ATGCAGTTGG GAAGACGGGG CACTTATTTC ACGAAAGTTC 1320
CAGAAGTGCA TAGATTGCTA CATGAGCCGG AACCAGTCCA AAACGATCCC CTTCAGAGAC 1380
TGCAAGGTTT TAAAGCAGAG GCCGCGGTTT ATGCCTATGA AGAAACAGCC TCATTATATT 1440
GGCGGAGATG GACTTGAGCT TAGGGACTAC CAGCTGGACA GCTTGAACTG GATGGCCCAT 1500
TCATGGTGCA AAGGTAACAG TTGTATTTTG GCAGATGAGA TGGGTCTGGG TAAAACCATC 1560
CAGACAATCT CTTTTCTGAA CTACCTGTTC CATGAGCACC AGCTTTATGG GCCTTTCCTG 1620
CTGGTGGTGC CCTTGTCCAC TCTCACGTCC TGGCAGAGGG AGATCCACCT TTGGGCCCCA 1680
CAAATGAATG TGGTGGTCTA CCTGGGAGAT ATCAGCAGTA GGAACATGAT CCGGACACAT 1740
GAGTGGATGC ATTCACAGAC CAAGCGGCTG AAGTTCAACA TCCTCCTCAC TACATATGAA 1800
ATCCTCCTGA AAGACAAGTC ATTTCTAGGG AATGTGAGCT GGGCTTTTAT TGGTGTGGAT 1860
GAGGCCCACC GGCTGAAGAA TGATGATTCA CTTCTGTACA AGACCATGAT TGACTTCAAA 1920
TCCAATCACC GGCTCCTTAT CACAGGAACA CCTTTGCAGA ACTCGCTGAA AGAGCTGTGG 1980
TCTTTACTGC ACTTCATCAT GCCAGAGAAG TTTCACTCAT GGGAGCTCTT TGAGGATGAG 2040
CACGGAATGG GAAGAGATTC TGGCTACACC AGCCTGCACA AGGAGCTGGA GCCGTTCCTG 2100
CTGCGCAGGG TCAAGAAGGA TGTGGAGAAG TCACTGCCTG CCAAGGTGGA ACAGATCCTC 2160
AGGGTGGAGA TGAGTGCTAT GCAGAAACAG TACTATAAGT GGATCTTGAC GAGAAACTAC 2220
AAGGCTCTGA GTAAAGGTAC AAAAGGAAGC ACGTCTGGCT TCCTCAACAT TATGATGGAG 2280
CTGAAGAAGT GCTGTAATCA CTGCTACCTC ATCAAATCGC CAGACGACCA TGATTTCTAC 2340
AACAAAGCAG AGGCCTTGCA ACACTTAATA CGCAGCAGTG GGAAGCTGGT CCTGTTGGAC 2400
AAGCTGCTGG TGCGACTAAA GGAACGTGGC CACCGCGTCC TCATCTTTTC CCAGATGGTC 2460
CGGATGCTGG ACATCCTGGC TGAGTACCTG AAGAGTCGCC AGTTCTTATT TCAGAGACTG 2520
GATGGCTCTA TTAAGGGTGA GATGAGGAAA CAAGCGTTGG ATCATTTCAA TGCAGAAGGC 2580
TCTGAGGATT TCTGCTTCCT GCTGTCCACG CGAGCGGGTG GTCTGGGTAT TAACTTGGCC 2640
TCTGCAGATA CTGTGGTCAT ATTTGACTCA GACTGGAACC CCCAGAATGA CCTGCAGGCT 2700
CAGGCCAGAG CTCACAGGAT TGGGCAGAAG AGACAGGTAA ATATTTACCG TCTTGTGACC 2760
AAAGGATCTG TAGAAGAGGA TATTATTGAA AGAGCCAAGA AAAAGATGGT GCTGGACCAC 2820
CTTGTGATTC AGAGGATGGA CACGACAGGA AAGACTGTCC TCCATACTGG TGCTGCCCCC 2880
TCCAGCAGTT CCACCCCTTT CAACAAGGAG GAGCTGTCGG CTATTCTAAA GTTTGGTGCT 2940
GAAGAACTCT TCAAGGAGCC AGAGGGAGAG GAACAGGAGC CTCAGGAAAT GGATATTGAT 3000
GAAATTCTGA AGAGAGCAGA AACCAGAGAA AATGACCCTG GCCCGTCTAC TGTAGGAGAG 3060
GAACTTCTCT CACAGTTTAA GGTGGCAAAC TTCACTATGA TGGAAGAGGA GGAGATTGAC 3120
ATGGACGCAG ATGGCAACCA GAGGAACTGG GACGACATTA TCCCAGAGGA GCAGCGGCGG 3180
AGGATGGAGG AGGAGGAGAG GCAGAAGGAG CTGGCAGAGA TCTACCTGCT TCCCCGCATG 3240
AGGAACTGTG CCAAACAGAT AAGCTTCAAC GGTAACGAGG GCAGACGGAG TCGGAACAGA 3300
AGATACTCTG GCTCAGACAG CGACTCCGCG TCAGATCGAA AACGGCCTAA GAAGAGAGGC 3360
AGACCTCGAA CGATTCCTAG GGAGAATATT AAGGGCTTTA GTGATGCTGA AATACGAAGA 3420
TTCATTAAGA GCTACAAGAA GTTTGGGGGT CCTTTGGAAA GATTGGATGC TATTGCCCGA 3480
GATGCTGAGT TGGTGGATAA ATCGGAGCAT GATTTGAGGC GACTGGCAGA AACTGTGCAC 3540
AACGGCTGTG TTAAAACACT GAGGGAAAAC CCCTGTGGAC CAGAGAAGAC CTCAGGAGGC 3600
AGGCGAGGCA AGGTGAAAGG ACCCACTTTC AGAATATCAG GAGTTCAGGT CAATGCTAAG 3660
CTAGTAATCT CACATGAGGA GGAACTGGCG CCTCTGCACA AGGCCATTCC TGCAGACCCA 3720
GAGGAGAGGA AGAGGTATAC ACTTCCTTGC CATGCAAAGG CAGCTCATTT TGATATTGAC 3780
TGGGGAAAAG AGGATGACTC CAGCCTGCTT ATTGGTATTT ATGAGTATGG CTATGGAAGC 3840
TGGGAAATGA TTAAAATGGA CCCAGACCTC AACCTTACAC ATAAGCTCTT ACCAGATGAT 3900
CCAGATAAAA AGCCACAAGC GAAGCAGCTC CAGACACGAG CAGACTACCT CATCAAATTG 3960
CTCAGCAAGG ACCTTGCCAA GAAGGAGGCC CAAAGGCAAA CGGGCAATTC TAATTCACGA 4020
AAGAGGAAGC CACGGGGAAA GAAGAACAAA GCTGTGAAAC CGAAGGTGGA AGAAGTGCCC 4080
AACAGTCTGT CTTCTGTTCC TCCCTCAGAC AAGAGTTCGG AGGACGAGGA CGACAAGGTA 4140
GAAGCAAAGG AAATTCCCAC TGCAAAGCCA GCAGCTGCTA GAAAGACAAA AGTCCCTGAT 4200
CGAGCTGTGA AGGAGGAGGA AGAGGAGGAA CCCGAGTCAG AGGCTCATGT CAAAGAAGAG 4260
AAGGAGGAGA AGGAGACAAA AGAAAAGGAG GTGAAGAAAG AGATCAAAAA AGAGAAGAAG 4320
GAGGAAGGCC GAGAAGGCAA AGAGAAAAAG GAGCCAAAGG AGAAAAAGGA GACCAAGCCT 4380
TTGGAGCCTG TGCACAAAGT GGAAGAGGCG AATTCAGAAA AGACTCTGGA TATAAAAGCT 4440
GATATCTGGG AGAAGAGTAA AAAGGCTGAC ACTCCAATCC ACATTACTGC AGGAGGAGAG 4500
ACCGTTCCAA TCTCTGAGGA GTCAGAAGAG CTTGACCAGA AGACTTTCAG TGTGTGTAAG 4560
GAGCGCATGA GGCCAGTGAA AGCTGCTTTG AAACAACTGG ACCGTCCTGA GAAAGGTCTT 4620
TCAGAGCGTG AACAGCTGGA GCACACTCGG CAGTGCCTGA TCAAAATTGG AGATCACATC 4680
ACAGACTGTC TCAAAGAGTA CAGCAACCCT GAACAGATCA AGCAGTGGAG AAAAAATCTT 4740
TGGATATTTG TTTCCAAATT TACGGAATTT GATGCAAGAA AACTGCATAA ATTGTATAAG 4800
CATGCAATCA AGAAAAGACA AGAAAACGCT CAGGCAGCGG ACCAGAACAC TAGCACTGTA 4860
AATACACAAT CATTAAAACA CACAGTTGTT CACCCAATTT GGTCAAGGTC ATGTGATGAT 4920
GAGGACATTA AAAGCCAAGA CAAAAATATT GGTAATATTG GGATAGAGAA AGAAAGGAGG 4980
AGGGAGACAG GGGGCCATAA AAAGCCATAC TGCTGTTTTC TCATATTGCA TACAGCCCCT 5040
AATATTTTGC CTTTCCACAG ATACTACAGC GACAGCAAGC ATAGGAAGCT AGATGATCAT 5100
CGTTCCAGTC GAGACCACTG GTCAGACAGC AGCTCTAAGG ACCGCCTGCA CTCAGACCAC 5160
CGATCCCACT CTGACCACCG ATCCCACTCT GAACACCGGT CCAGCTCTGA CTATAGCCAC 5220
CACAAACCCT CTCGGGACTA CCGCTATCAC TCAGACTGGC AAATGGAGCA CCGAGCGTCA 5280
GGCAGCGGAC CCCGTTCTCC TCGAGACCAG CGGTCGCCGT ACGACTCTCG CTCGCCCATG 5340
GGCCACCGGT CACCGTTCGA GTACTCATCT GACCACAAGA GCACGCCCGA GCAGGTCTGG 5400
AGCAGCCGCA AGACATAG 5419