WERAM Information

Tag Content
WERAM ID WERAM-Brr-0141
Ensembl Protein ID Bra028618.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra028618 Bra028618.1 Bra028618.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
HMT SET1 3.70e-28 99 121 242
Organism Brassica rapa
Domain Profile
  HMT SET1
       SET1.txt   2 elevakskikglglvakkeiekeelviEYvGevirsevadkrekeyekkeigvylfrldedaevvvdatkkgniarfi....nhsce....pNcea 89 
                    +l v++++ +g++++a+ +i++ +l++EY+G+v   ++ ++r k+ ++++i+++l   d+++++v++++k gni+rf+    nh+      +Nc++
  Bra028618.1-P 121 PLVVVEDQFQGFTVEADGPIKDLTLIAEYAGDV---DYLKNRAKD-DCDSIMTLLLCEDPSKSLVICPDKYGNISRFVsginNHNRYgkkmQNCKC 212
                    68999****************************...999999999.9999****************************9999888767789***** PP
       SET1.txt  90 kvvavdgekkiviyakraIekgeeltydYk 119
                     +++++ge +++i+a+r+I+kge+l+ydY+
  Bra028618.1-P 213 VRYSINGEVRVLIVATRDISKGERLYYDYN 242
                    *****************************7 PP
Protein Sequence
(Fasta)		MHFFRIEKFD VTEKPELSQE ETIKHKRKSR PLTLTKRRRR LLPFVPSKDP NQRDAQLRTL 60
ASALTTLKMK YSNELTYIPG MAPRSANQSM FEIGGVQVLS KEDIETLEQC RAMHRVGGYP 120
PLVVVEDQFQ GFTVEADGPI KDLTLIAEYA GDVDYLKNRA KDDCDSIMTL LLCEDPSKSL 180
VICPDKYGNI SRFVSGINNH NRYGKKMQNC KCVRYSINGE VRVLIVATRD ISKGERLYYD 240
YNGYEHAYPT HHFL 254
Nucleotide Sequence
(Fasta)		ATGCATTTCT TCCGGATTGA GAAATTCGAT GTAACAGAGA AACCAGAGTT GAGTCAAGAA 60
GAGACAATAA AGCACAAGAG AAAATCTCGC CCTTTGACTC TGACGAAGAG AAGGAGAAGA 120
CTATTACCCT TTGTTCCATC AAAAGATCCT AATCAGAGAG ATGCACAACT GAGAACACTT 180
GCATCTGCTT TAACAACCTT GAAAATGAAA TACAGCAACG AGTTGACTTA CATCCCCGGG 240
ATGGCTCCTC GGTCCGCTAA TCAGTCCATG TTCGAGATTG GTGGGGTGCA GGTGCTTTCC 300
AAGGAAGATA TTGAGACACT GGAACAATGT CGAGCTATGC ATCGAGTAGG AGGGTACCCT 360
CCTCTTGTTG TCGTAGAAGA TCAGTTTCAA GGTTTCACAG TTGAAGCAGA TGGTCCAATT 420
AAGGACCTCA CATTGATAGC TGAATACGCA GGAGATGTTG ATTACTTAAA GAACCGAGCA 480
AAAGACGATT GTGACAGCAT CATGACCCTC CTTTTGTGTG AAGATCCATC GAAGTCTCTT 540
GTTATTTGCC CTGACAAGTA TGGAAACATA TCTCGCTTCG TCAGTGGCAT CAACAATCAC 600
AATAGGTATG GTAAGAAGAT GCAGAACTGT AAATGCGTGA GGTATAGCAT AAATGGAGAG 660
GTTCGAGTTC TTATAGTGGC TACAAGGGAT ATCTCGAAAG GGGAAAGGCT TTACTATGAC 720
TACAATGGTT ATGAACATGC GTATCCTACT CATCACTTCC TATGA 766
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0025 Bo2g009530.1 Brassica oleracea 98 1e-135 479
WERAM-Arl-0102 fgenesh2_kg.6__ 934__ AT5G09790.2 Arabidopsis lyrata 73 4e-103 371
WERAM-Art-0120 AT5G09790.2 Arabidopsis thaliana 73 4e-102 367
WERAM-Thc-0006 EOX92475 Theobroma cacao 70 3e-94 341
WERAM-Pot-0086 POPTR_0007s03790.1 Populus trichocarpa 71 2e-88 322
WERAM-Sol-0132 Solyc11g005730.1.1 Solanum lycopersicum 69 5e-87 317
WERAM-Viv-0020 VIT_04s0044g00950.t01 Vitis vinifera 74 2e-86 315
WERAM-Glm-0042 GLYMA04G39260.1 Glycine max 68 1e-84 309
WERAM-Met-0073 AES72827 Medicago truncatula 66 5e-84 308
WERAM-Sei-0011 Si001848m Setaria italica 61 7e-82 300
WERAM-Mua-0093 GSMUA_Achr6P25240_001 Musa acuminata 65 8e-81 297
WERAM-Orp-0016 OPUNC01G43970.1 Oryza punctata 67 1e-80 296
WERAM-Zem-0084 GRMZM2G149587_P02 Zea mays 67 1e-80 296
WERAM-Lep-0017 LPERR01G39410.1 Leersia perrieri 66 1e-80 296
WERAM-Ori-0016 BGIOSGA005241-PA Oryza indica 67 2e-80 295
WERAM-Sob-0061 Sb03g046950.1 Sorghum bicolor 66 2e-80 295
WERAM-Orgl-0015 OGLUM01G49340.1 Oryza glumaepatula 66 3e-80 295
WERAM-Orr-0015 ORUFI01G48490.1 Oryza rufipogon 66 4e-80 295
WERAM-Orni-0015 ONIVA01G51190.1 Oryza nivara 66 4e-80 295
WERAM-Org-0015 ORGLA01G0387900.1 Oryza glaberrima 66 4e-80 295
WERAM-Ors-0011 OS01T0965500-01 Oryza sativa 66 5e-80 294
WERAM-Hov-0029 MLOC_20462.1 Hordeum vulgare 60 8e-80 293
WERAM-Orm-0017 OMERI01G41800.1 Oryza meridionalis 66 1e-79 293
WERAM-Orb-0015 OBART01G44970.1 Oryza barthii 66 2e-79 292
WERAM-Orbr-0019 OB01G54220.1 Oryza brachyantha 65 3e-79 291
WERAM-Tra-0251 Traes_6AS_3BB0C3778.1 Triticum aestivum 59 8e-79 290
WERAM-Aet-0004 EMT03211 Aegilops tauschii 64 5e-78 288
WERAM-Brd-0061 BRADI2G61717.1 Brachypodium distachyon 59 7e-77 284
WERAM-Prp-0117 EMJ20963 Prunus persica 65 1e-76 283
WERAM-Tru-0048 TRIUR3_21302-P1 Triticum urartu 62 6e-76 281
WERAM-Sot-0056 PGSC0003DMT400047656 Solanum tuberosum 63 1e-74 276
WERAM-Sem-0042 EFJ28497 Selaginella moellendorffii 60 4e-72 268
WERAM-Php-0094 PP1S403_14V6.1 Physcomitrella patens 57 2e-68 256
WERAM-Amt-0073 ERN19309 Amborella trichopoda 60 2e-50 196
WERAM-Tar-0201 ENSTRUP00000042261.1 Takifugu rubripes 29 2e-07 53.5
WERAM-Ten-0192 ENSTNIP00000019016.1 Tetraodon nigroviridis 30 9e-07 51.2
WERAM-Mup-0106 ENSMPUP00000009598.1 Mustela putorius furo 28 1e-06 50.8
WERAM-Xet-0165 ENSXETP00000005100.3 Xenopus tropicalis 28 1e-06 50.8
WERAM-Orla-0054 ENSORLP00000006946.1 Oryzias latipes 33 2e-06 50.1
WERAM-Lac-0115 ENSLACP00000014009.1 Latimeria chalumnae 28 3e-06 49.3
WERAM-Cii-0057 ENSCINP00000025949.2 Ciona intestinalis 28 4e-06 49.3
WERAM-Tas-0004 ENSTSYP00000000493.1 Tarsius syrichta 28 4e-06 48.9
WERAM-Mae-0114 ENSMEUP00000010800.1 Macropus eugenii 28 8e-06 48.1
Created Date 25-Jun-2016