WERAM Information

Tag Content
WERAM ID WERAM-Pot-0086
Ensembl Protein ID POPTR_0007s03790.1
Gene Name POPTR_0012s02530g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0007s03790 POPTR_0007s03790.1 POPTR_0007s03790.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HMT SET1 6.60e-29 101.6 129 250
Organism Populus trichocarpa
Domain Profile
  HMT SET1
            SET1.txt   2 elevakskikglglvakkeiekeelviEYvGevirsevadkrekeyekkeigvylfrldedaevvvdatkkgniarfi....nhsce.... 84 
                         +l v++++ +g++++a+++i++ ++++EY G+v   ++ ++re++ ++++++++l + d+++++v++++k+gniarfi    nh ++    
  POPTR_0007s03790.1 129 PLLVVFDSCEGYTVEADDQIKDLTILAEYSGDV---DYIKNREHD-DCDSMMTLLLARDPSKSLVICPDKRGNIARFInginNHTPDgkkk 215
                         68899****************************...9*******9.9999****************************9999999989999 PP
            SET1.txt  85 pNceakvvavdgekkiviyakraIekgeeltydYk 119
                         +Nc++ ++ v+ge++++++a+r+++kge+l+ydY+
  POPTR_0007s03790.1 216 QNCKCVRYDVNGECRVILVATRDVAKGERLYYDYN 250
                         **********************************7 PP
Protein Sequence
(Fasta)		MKCLRPIVVR VPIGSWICNK CSGDGQGRVR NSRKRRRRSL VYQKKRRRLL PFIPSEDPAQ 60
RLKQMGTLAS ALTALHMEFS DDLTYLPGMA PQLANQAKFE QGGMQVLSKE DIETLEQCRA 120
MCKRGECPPL LVVFDSCEGY TVEADDQIKD LTILAEYSGD VDYIKNREHD DCDSMMTLLL 180
ARDPSKSLVI CPDKRGNIAR FINGINNHTP DGKKKQNCKC VRYDVNGECR VILVATRDVA 240
KGERLYYDYN GHEHEYPTQH FV 262
Nucleotide Sequence
(Fasta)		TATGCGGTTG TGGAGAGGGA GGACTATGGC GATATCAGCT GCGAACAATG CCGCTCCGGG 60
GAACGAGCGG AGGAGCTGTT GTTGTGTGAT AAATGTGATA AAGGATATCA CATGAAGTGC 120
TTGAGACCGA TTGTTGTTAG GGTCCCGATT GGCTCGTGGA TTTGTAACAA GTGCTCTGGA 180
GACGGCCAAG GACGTGTAAG AAATTCTAGA AAACGACGGA GACGTTCATT GGTGTATCAA 240
AAGAAAAGAA GGAGACTGTT GCCATTTATT CCATCAGAAG ATCCCGCCCA AAGGCTCAAA 300
CAAATGGGCA CCCTTGCTTC TGCTTTAACA GCATTACACA TGGAATTTAG TGATGATTTG 360
ACCTACTTGC CTGGCATGGC TCCTCAATTA GCCAATCAGG CCAAGTTTGA GCAGGGTGGC 420
ATGCAGGTCC TTTCCAAGGA GGACATTGAG ACATTGGAAC AGTGCAGAGC TATGTGCAAA 480
AGAGGCGAAT GCCCTCCTCT TTTAGTAGTT TTTGATTCAT GTGAAGGCTA TACAGTTGAG 540
GCAGATGACC AGATAAAGGA TTTGACCATT TTAGCAGAAT ACTCAGGTGA CGTGGATTAC 600
ATTAAAAACC GAGAACATGA TGATTGTGAT AGTATGATGA CCCTTCTTTT GGCCAGAGAC 660
CCATCTAAAA GCCTTGTCAT CTGTCCCGAT AAACGTGGAA ATATTGCACG CTTTATCAAT 720
GGCATTAACA ATCATACTCC GGATGGCAAG AAGAAGCAGA ATTGTAAATG TGTGAGATAC 780
GATGTTAACG GGGAATGCCG GGTCATTTTG GTTGCTACTC GTGATGTTGC TAAAGGGGAG 840
AGGCTATACT ATGATTATAA TGGACATGAG CATGAATACC CTACTCAACA TTTTGTTTGA 900
901
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Thc-0006 EOX92475 Theobroma cacao 75 2e-121 432
WERAM-Glm-0042 GLYMA04G39260.1 Glycine max 67 1e-110 396
WERAM-Arl-0102 fgenesh2_kg.6__ 934__ AT5G09790.2 Arabidopsis lyrata 66 2e-109 392
WERAM-Sol-0132 Solyc11g005730.1.1 Solanum lycopersicum 68 3e-109 391
WERAM-Bro-0182 Bo9g173800.1 Brassica oleracea 66 7e-109 390
WERAM-Art-0120 AT5G09790.2 Arabidopsis thaliana 66 8e-109 390
WERAM-Mua-0093 GSMUA_Achr6P25240_001 Musa acuminata 64 5e-104 374
WERAM-Met-0073 AES72827 Medicago truncatula 64 2e-103 372
WERAM-Brr-0046 Bra009403.1-P Brassica rapa 77 4e-102 368
WERAM-Viv-0020 VIT_04s0044g00950.t01 Vitis vinifera 86 3e-101 365
WERAM-Tra-0347 TRAES3BF082800240CFD_t1 Triticum aestivum 63 4e-101 364
WERAM-Lep-0017 LPERR01G39410.1 Leersia perrieri 60 4e-98 354
WERAM-Orb-0015 OBART01G44970.1 Oryza barthii 60 1e-97 353
WERAM-Orbr-0019 OB01G54220.1 Oryza brachyantha 60 2e-97 352
WERAM-Prp-0117 EMJ20963 Prunus persica 62 3e-97 351
WERAM-Tru-0048 TRIUR3_21302-P1 Triticum urartu 71 5e-97 351
WERAM-Orp-0016 OPUNC01G43970.1 Oryza punctata 60 5e-97 351
WERAM-Orgl-0015 OGLUM01G49340.1 Oryza glumaepatula 60 7e-97 350
WERAM-Orr-0015 ORUFI01G48490.1 Oryza rufipogon 60 9e-97 350
WERAM-Orni-0015 ONIVA01G51190.1 Oryza nivara 60 9e-97 350
WERAM-Org-0015 ORGLA01G0387900.1 Oryza glaberrima 60 9e-97 350
WERAM-Ors-0011 OS01T0965500-01 Oryza sativa 60 1e-96 350
WERAM-Sei-0011 Si001848m Setaria italica 60 1e-96 349
WERAM-Ori-0016 BGIOSGA005241-PA Oryza indica 60 1e-96 349
WERAM-Hov-0041 MLOC_39454.1 Hordeum vulgare 73 2e-96 348
WERAM-Orm-0017 OMERI01G41800.1 Oryza meridionalis 59 4e-96 348
WERAM-Sob-0061 Sb03g046950.1 Sorghum bicolor 60 1e-95 346
WERAM-Zem-0084 GRMZM2G149587_P02 Zea mays 60 4e-95 345
WERAM-Brd-0061 BRADI2G61717.1 Brachypodium distachyon 60 7e-95 343
WERAM-Aet-0004 EMT03211 Aegilops tauschii 71 7e-94 340
WERAM-Sot-0056 PGSC0003DMT400047656 Solanum tuberosum 70 5e-90 327
WERAM-Sem-0042 EFJ28497 Selaginella moellendorffii 55 7e-88 320
WERAM-Php-0094 PP1S403_14V6.1 Physcomitrella patens 52 6e-83 304
WERAM-Amt-0073 ERN19309 Amborella trichopoda 59 9e-72 267
WERAM-Orla-0054 ENSORLP00000006946.1 Oryzias latipes 35 3e-08 56.2
WERAM-Cii-0053 ENSCINP00000025830.2 Ciona intestinalis 31 6e-07 52.0
WERAM-Pof-0148 ENSPFOP00000012106.2 Poecilia formosa 31 7e-07 51.6
WERAM-Xet-0165 ENSXETP00000005100.3 Xenopus tropicalis 26 2e-06 50.4
WERAM-Ten-0113 ENSTNIP00000012558.1 Tetraodon nigroviridis 31 2e-06 50.1
WERAM-Xim-0106 ENSXMAP00000009424.1 Xiphophorus maculatus 31 3e-06 49.3
WERAM-Mup-0063 ENSMPUP00000005424.1 Mustela putorius furo 31 4e-06 49.3
WERAM-Gam-0060 ENSGMOP00000006181.1 Gadus morhua 30 4e-06 49.3
WERAM-Ran-0136 ENSRNOP00000027629.6 Rattus norvegicus 30 4e-06 49.3
WERAM-Pytr-0024 EDU50267 Pyrenophora triticirepentis 31 5e-06 48.9
WERAM-Pyt-0012 EFQ92879 Pyrenophora teres 31 6e-06 48.5
WERAM-Phn-0002 SNOT_00365 Phaeosphaeria nodorum 33 6e-06 48.5
Created Date 25-Jun-2016