WERAM Information

Tag Content
WERAM ID WERAM-Brr-0064
Ensembl Protein ID Bra012243.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra012243 Bra012243.1 Bra012243.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 2.50e-10 41.3 175 217
Organism Brassica rapa
Domain Profile
  Ac_Reader Bromodomain
      BROMO.txt   3 hevsepFrepvdpqleipdYydiikePmdLstikerleegnYss 46 
                    ++   +++ pvdp  e+pdY+dii++Pmd+st +++l++  Y++
  Bra012243.1-P 175 KDMYGVYSDPVDP-EELPDYHDIIENPMDFSTLQKKLDSDSYRK 217
                    56667899*****.6***************************85 PP
Protein Sequence
(Fasta)		MSEVAETLTR KKKGRPSLLD LQKRAIKQQQ LQKFHDDHRS APKNPNSLNS GSRSKCRNPN 60
RNRVSSDDDE DEEDDDERRE KKHRLLRGLN THSRRHSPNS KPGGAAHGSG YTVAFQIALD 120
PNLGFKLGFN VISRAFVYQF LLLDMFIRSP AESGPTTPLP DKKLLLFIID KLQKKDMYGV 180
YSDPVDPEEL PDYHDIIENP MDFSTLQKKL DSDSYRKHRL YKSWRKSTSR ILRQDSDDEE 240
PQTQQQQQQQ HQHQLKVAER GRPPKKQPEP SCLDRTTSEI SADDALNPGG DSSSKFSGAY 300
NLRRTSVRIN HDSETQSGCS QDWENEFPPS VVKAVNKYGL KHFDVDDNRR ETYNHLSTST 360
QEPWVLTTLE DELKELIPVG LNTEYGYTRS LARYGANLGP LAWKIVSRRI ETALPAGIKF 420
GLGWVGEDDP PKQTLLVWSL GKHKCSNDHS DRVMSPTASV SSAFIGNRHS SSQGIKETAP 480
ARVLNRETEF PSSSSSRQSE QLIKPERSNG LIRGFSGFSQ SPSPMMGITR QQQPNLNNEA 540
KPGGLS 546
Nucleotide Sequence
(Fasta)		ATGAGTGAGG TAGCAGAAAC ATTGACGAGG AAGAAGAAAG GTAGACCATC TCTTCTAGAC 60
CTTCAGAAAC GAGCTATCAA ACAGCAGCAA TTACAAAAGT TCCACGATGA CCACAGATCC 120
GCTCCCAAAA ACCCTAATTC CCTCAACTCC GGCAGCCGAT CCAAGTGCCG GAACCCTAAC 180
CGCAACAGAG TCTCTTCCGA TGACGACGAA GATGAGGAAG ACGACGACGA GCGGCGGGAG 240
AAGAAACACA GACTATTACG CGGATTGAAT ACTCACTCTC GTCGACATTC TCCTAATTCA 300
AAACCTGGTG GTGCTGCTCA CGGATCTGGA TACACGGTAG CGTTTCAAAT TGCTCTCGAT 360
CCTAACTTAG GGTTTAAATT AGGGTTCAAT GTGATTTCTC GAGCGTTTGT TTATCAGTTT 420
CTATTATTGG ATATGTTTAT CAGGTCTCCC GCTGAGTCTG GCCCCACTAC ACCTTTGCCA 480
GACAAAAAGT TGTTGTTGTT CATCATCGAT AAACTTCAAA AGAAAGATAT GTATGGTGTT 540
TATTCAGATC CTGTTGATCC CGAGGAGCTT CCTGATTATC ATGACATTAT CGAGAATCCT 600
ATGGATTTTA GCACACTCCA GAAGAAATTA GACTCTGATA GCTATAGAAA GCACAGGCTA 660
TACAAGAGCT GGCGAAAAAG CACTTCGAGA ATTTTGAGGC AAGACAGTGA TGATGAAGAA 720
CCACAAACCC AACAACAGCA GCAGCAGCAG CACCAGCACC AGCTAAAAGT TGCTGAAAGA 780
GGGCGTCCAC CAAAGAAACA GCCTGAACCA TCTTGCTTAG ACCGTACTAC TTCTGAAATT 840
TCAGCTGATG ATGCGCTCAA TCCTGGAGGA GATAGCTCTA GCAAGTTTTC TGGTGCTTAC 900
AATCTAAGAA GGACATCGGT TAGGATCAAC CATGACAGTG AAACCCAAAG TGGCTGCTCG 960
CAAGATTGGG AGAACGAGTT TCCACCTTCG GTTGTGAAGG CTGTTAACAA GTATGGTTTG 1020
AAACATTTCG ATGTCGATGA TAACAGACGC GAAACCTACA ACCACCTCTC AACTTCTACA 1080
CAAGAGCCGT GGGTTTTGAC AACGCTTGAA GACGAGTTAA AAGAGTTGAT TCCAGTTGGG 1140
CTTAACACTG AGTACGGTTA CACGAGGAGC CTGGCACGAT ACGGCGCGAA TCTCGGTCCT 1200
CTTGCCTGGA AAATTGTATC AAGGAGAATC GAAACCGCTT TGCCCGCTGG AATCAAGTTT 1260
GGTTTAGGTT GGGTTGGGGA GGATGATCCT CCAAAACAAA CGCTATTAGT GTGGTCGTTG 1320
GGAAAACATA AGTGTTCAAA TGATCATTCA GACAGAGTCA TGTCTCCGAC AGCTTCAGTC 1380
TCAAGCGCTT TCATAGGAAA CAGACATTCT TCTTCTCAAG GTATCAAAGA GACTGCACCT 1440
GCTCGTGTCT TGAATCGAGA AACTGAGTTC CCATCATCCT CCTCCTCTCG CCAGTCAGAA 1500
CAGCTGATCA AGCCTGAGAG AAGCAACGGT CTAATCCGTG GTTTCAGTGG ATTCAGCCAA 1560
AGTCCAAGTC CGATGATGGG AATCACAAGA CAGCAACAAC CAAACTTAAA CAACGAGGCC 1620
AAACCGGGGG GGCTGTCATG A 1642
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0125 Bo7g061450.1 Brassica oleracea 81 0.0 798
WERAM-Arl-0045 fgenesh2_kg.1__ 2254__ AT1G20670.1 Arabidopsis lyrata 62 6e-153 538
WERAM-Art-0015 AT1G20670.1 Arabidopsis thaliana 59 8e-146 514
WERAM-Thc-0091 EOY15288 Theobroma cacao 45 6e-76 282
WERAM-Pot-0022 POPTR_0002s01010.1 Populus trichocarpa 41 3e-67 253
WERAM-Prp-0047 EMJ12485 Prunus persica 40 2e-64 244
WERAM-Glm-0055 GLYMA06G01980.1 Glycine max 41 1e-57 221
WERAM-Viv-0118 VIT_18s0122g01220.t01 Vitis vinifera 38 3e-54 210
WERAM-Sol-0068 Solyc04g082530.2.1 Solanum lycopersicum 38 2e-48 191
WERAM-Met-0081 KEH36328 Medicago truncatula 37 2e-47 187
WERAM-Mua-0067 GSMUA_Achr4P04930_001 Musa acuminata 39 3e-46 184
WERAM-Sot-0044 PGSC0003DMT400040444 Solanum tuberosum 37 5e-38 156
WERAM-Orb-0106 OBART09G18790.1 Oryza barthii 31 4e-36 150
WERAM-Orbr-0112 OB09G25430.1 Oryza brachyantha 36 2e-35 148
WERAM-Amt-0042 ERN17379 Amborella trichopoda 34 5e-35 146
WERAM-Sei-0130 Si034652m Setaria italica 31 6e-35 146
WERAM-Org-0099 ORGLA09G0149700.1 Oryza glaberrima 34 7e-34 142
WERAM-Orp-0099 OPUNC09G17160.1 Oryza punctata 36 8e-34 142
WERAM-Tra-0157 Traes_4DL_AE09D3F97.1 Triticum aestivum 35 9e-34 142
WERAM-Ori-0102 BGIOSGA029318-PA Oryza indica 29 1e-33 142
WERAM-Ors-0095 OS09T0550000-01 Oryza sativa 34 2e-33 141
WERAM-Brd-0113 BRADI4G37197.1 Brachypodium distachyon 34 5e-33 140
WERAM-Hov-0042 MLOC_4085.1 Hordeum vulgare 34 6e-33 139
WERAM-Zem-0106 GRMZM2G310155_P01 Zea mays 33 6e-32 136
WERAM-Sob-0015 Sb01g048320.1 Sorghum bicolor 33 2e-31 134
WERAM-Orr-0109 ORUFI09G20360.1 Oryza rufipogon 34 5e-31 133
WERAM-Aet-0070 EMT11052 Aegilops tauschii 34 4e-30 130
WERAM-Lep-0103 LPERR09G14620.1 Leersia perrieri 33 5e-30 130
WERAM-Orni-0029 ONIVA03G02060.1 Oryza nivara 33 7e-30 129
WERAM-Orgl-0032 OGLUM03G02390.1 Oryza glumaepatula 33 7e-30 129
WERAM-Tru-0062 TRIUR3_25198-P1 Triticum urartu 34 8e-30 129
WERAM-Orm-0032 OMERI03G02320.1 Oryza meridionalis 33 8e-30 129
WERAM-Orl-0024 KN538737.1_FGP053 Oryza longistaminata 33 1e-29 128
WERAM-Sem-0087 EFJ10182 Selaginella moellendorffii 33 2e-24 111
WERAM-Php-0061 PP1S259_122V6.1 Physcomitrella patens 28 2e-21 101
WERAM-Cym-0003 CMB028CT Cyanidioschyzon merolae 55 9e-09 59.3
WERAM-Orn-0045 ENSONIP00000004990.1 Oreochromis niloticus 54 1e-07 55.8
WERAM-Orla-0137 ENSORLP00000016236.1 Oryzias latipes 54 9e-07 52.8
WERAM-Ten-0043 ENSTNIP00000006650.1 Tetraodon nigroviridis 54 1e-06 52.4
WERAM-Gaa-0090 ENSGACP00000011699.1 Gasterosteus aculeatus 49 2e-06 52.0
WERAM-Tar-0101 ENSTRUP00000020960.1 Takifugu rubripes 54 2e-06 51.2
WERAM-Xim-0105 ENSXMAP00000009386.1 Xiphophorus maculatus 53 3e-06 50.8
Created Date 25-Jun-2016