WERAM Information

Tag Content
WERAM ID WERAM-Arl-0011
Ensembl Protein ID Al_scaffold_0005_2268
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Al_scaffold_0005_2268 Al_scaffold_0005_2268 Al_scaffold_0005_2268
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 3.20e-13 50.3 474 614
Organism Arabidopsis lyrata
Domain Profile
  Me_Reader PHD
                PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                            ++C +C  d+ +   ++ C +C+++fH+ C+k++  s+peg  wyC sC 
  Al_scaffold_0005_2268 474 DMCSIC-GDGGD---LLLCAGCPQAFHTACLKFQ--SMPEG-TWYCSSCN 516
                            58****.44444...8******************..*****.*******7 PP
                PHD.txt  13 gekemvqCdeCddwfHlkCvklp....lsslpegkswy.CpsC 50 
                            ++++++ Cd+C++ +H+ C+  +    l+ +p++ +w+ C  C
  Al_scaffold_0005_2268 573 DDRTVILCDQCEKEYHVGCLRENdlcdLKGIPQD-KWFcCSDC 614
                            44569****************9988889999999.88725556 PP
Protein Sequence
(Fasta)		MAEENSETKK RDRLCIEQDN LEEELYSSNK RQAKEPSNDD IRSEISNPVA SPVVDNASSF 60
RDITSNPAKS SSGDRVGSCS GSYEATSDEK RSEYCSSLAD SSQSSDAVPS SFVREIPKHL 120
STTGITKITF KLSKRNEDVC DLPMIQEHTW EGSPSNVASS TLGVKMLDKI DSTNFPSNVK 180
KLLATGILDG ARVKYLSISP ARELQGIIHS GGYLCGCTVC DFSKVLGAYE FERHAGGKTK 240
HPNNHIYLEN GRPVYNMIQE LRVAPPDVLE EVIRKVAGSA LSEEGFQAWK ESFQQDDSNH 300
IMDYSFQSLV SYPGSGWSID ESQSSTPYFP ENNYFRKKIS TKDTRHEHKP KAKKVTSHMF 360
GMGCHKKAAG GGKWKRDNDL HRLLFLPNGL PDGTELAYFV KSQKLLQGYK QGSGIVCSCC 420
DTEISPSQFE AHAGMAGRRQ PYRHIHISSG LSLHDIAMSL ADGGHVITTG DSDDMCSICG 480
DGGDLLLCAG CPQAFHTACL KFQSMPEGTW YCSSCNDGPT SCKTATATDP NLKSIVGSIA 540
IFSLSAHIRV LHSAYCFSPI SDRSLDFSIG KFDDRTVILC DQCEKEYHVG CLRENDLCDL 600
KGIPQDKWFC CSDCSRIHTA LQSSASCGPQ TIPTVLLDTI SRKYREKGIC IDNGDNVEWR 660
MLSGKSRYAE HLPLLSRAAT IFRECFDPIV AKSGRDLIPV MVYGRNISGQ EFGGMYCLVL 720
MVNSLVVSAA LLRIFGQKVA ELPIVATSRE YQGRGYFQGL FACVENLLSS LNVENLLLPA 780
AEEAESIWTK KFGFTKMTEH QLQKYQREVQ LTIFKGTSML EKKVPRFSES TSLI 834
Nucleotide Sequence
(Fasta)		ATGGCGGAAG AGAATTCGGA AACGAAGAAG AGAGACCGTC TTTGTATTGA ACAAGATAAT 60
CTAGAAGAAG AGCTTTATTC CTCCAACAAG AGACAAGCCA AGGAACCTTC AAATGATGAC 120
ATTAGGTCGG AAATATCTAA CCCTGTTGCG TCTCCAGTGG TGGATAACGC CTCTAGTTTT 180
CGTGATATCA CTAGTAATCC GGCTAAATCG AGTTCTGGTG ATCGTGTTGG GTCTTGTTCT 240
GGTTCCTATG AGGCTACTAG TGATGAGAAA CGCAGTGAAT ACTGTTCATC GCTAGCTGAT 300
AGCTCGCAAT CGAGTGATGC TGTACCGTCA AGTTTTGTAC GGGAGATTCC AAAACATCTT 360
AGCACTACTG GGATAACGAA AATCACGTTT AAGCTCAGTA AACGAAATGA GGATGTCTGT 420
GATTTGCCTA TGATTCAAGA GCATACTTGG GAGGGTTCTC CTTCGAATGT AGCTTCTTCA 480
ACTTTAGGTG TGAAAATGTT GGACAAGATT GACTCTACCA ACTTTCCATC TAATGTGAAG 540
AAGCTATTGG CGACGGGGAT CCTCGATGGT GCTCGGGTGA AGTACCTTTC AATCTCACCT 600
GCGAGAGAGC TTCAAGGGAT AATCCACTCG GGTGGGTATT TGTGTGGCTG TACTGTCTGC 660
GATTTCTCGA AAGTTCTAGG TGCCTATGAG TTCGAGCGGC ATGCTGGTGG AAAAACAAAA 720
CACCCTAATA ATCACATATA TCTGGAGAAC GGACGGCCGG TTTATAACAT GATTCAAGAG 780
CTGAGGGTTG CTCCCCCTGA CGTTTTGGAG GAGGTGATAA GGAAAGTGGC TGGTTCTGCT 840
CTGAGCGAGG AGGGATTTCA GGCTTGGAAA GAAAGTTTCC AGCAAGATGA TAGCAACCAT 900
ATCATGGATT ATTCGTTTCA ATCCCTTGTT AGTTATCCTG GTTCTGGTTG GTCTATTGAT 960
GAGAGTCAAA GCTCTACTCC ATATTTTCCG GAGAACAATT ATTTTAGAAA GAAAATCAGT 1020
ACAAAGGACA CACGACACGA ACATAAGCCA AAAGCAAAGA AGGTTACCTC TCATATGTTT 1080
GGTATGGGTT GCCATAAGAA AGCTGCCGGA GGCGGTAAAT GGAAGAGGGA CAATGATTTA 1140
CACCGGTTGC TGTTTTTGCC AAATGGGCTA CCAGATGGGA CTGAATTGGC TTACTTTGTG 1200
AAATCACAGA AACTACTGCA GGGTTACAAG CAAGGAAGTG GTATAGTATG TAGCTGCTGC 1260
GACACAGAGA TTAGTCCTTC ACAATTCGAA GCACATGCTG GAATGGCTGG TAGACGACAA 1320
CCTTATCGTC ATATCCACAT ATCTTCTGGA TTGTCATTGC ATGATATAGC CATGTCATTG 1380
GCGGATGGGG GCCATGTCAT TACAACTGGT GACAGTGATG ACATGTGTTC TATTTGTGGC 1440
GATGGTGGAG ATTTGCTACT CTGTGCTGGA TGTCCTCAAG CATTTCATAC AGCATGCTTG 1500
AAATTTCAAT CAATGCCTGA AGGTACTTGG TACTGTTCAA GCTGCAATGA TGGACCTACC 1560
TCTTGTAAAA CAGCCACTGC TACTGATCCC AATTTAAAAT CCATAGTTGG TTCTATAGCT 1620
ATTTTTAGTT TGAGTGCGCA TATACGCGTA CTCCACTCTG CTTATTGCTT CTCTCCCATT 1680
TCTGATAGGT CACTTGATTT TAGCATTGGG AAATTTGATG ATAGGACAGT TATTCTCTGT 1740
GACCAGTGTG AGAAAGAGTA TCACGTCGGT TGTCTCAGGG AAAATGATCT TTGCGATTTG 1800
AAAGGTATCC CCCAAGATAA ATGGTTCTGC TGTAGTGACT GCAGCAGGAT TCACACGGCT 1860
CTTCAAAGCT CTGCTTCGTG TGGGCCACAA ACTATTCCCA CGGTTTTGTT AGACACGATA 1920
AGCAGAAAGT ACAGAGAAAA AGGAATATGT ATTGACAATG GAGATAATGT GGAATGGAGG 1980
ATGCTTAGTG GAAAAAGTCG ATACGCAGAG CATCTACCCT TACTTTCACG AGCAGCTACT 2040
ATTTTCAGGG AGTGTTTTGA TCCCATTGTG GCAAAGTCTG GTCGTGATCT CATTCCTGTC 2100
ATGGTCTATG GGAGAAATAT ATCAGGCCAG GAGTTTGGAG GAATGTACTG CTTGGTCTTG 2160
ATGGTGAATT CCCTTGTTGT TTCTGCCGCG CTGCTTAGGA TATTTGGTCA GAAGGTTGCA 2220
GAACTTCCTA TTGTAGCTAC AAGCCGAGAG TATCAGGGAA GGGGCTACTT TCAAGGGCTG 2280
TTTGCTTGCG TTGAGAATCT TCTTTCCTCT CTGAATGTCG AGAACTTGCT TCTCCCAGCA 2340
GCTGAAGAAG CTGAGTCTAT CTGGACAAAG AAATTTGGCT TCACAAAGAT GACTGAACAT 2400
CAATTACAGA AGTACCAGAG AGAAGTGCAA CTTACAATAT TCAAAGGAAC ATCGATGCTC 2460
GAGAAGAAAG TACCGAGGTT TTCAGAATCA ACTTCACTCA TCTGA 2506
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Art-0089 AT3G53680.1 Arabidopsis thaliana 88 0.0 1428
WERAM-Brr-0089 Bra017181.1-P Brassica rapa 69 0.0 1007
WERAM-Bro-0085 Bo4g187000.1 Brassica oleracea 67 0.0 993
WERAM-Thc-0060 EOY07594 Theobroma cacao 57 0.0 815
WERAM-Viv-0057 VIT_08s0040g03340.t01 Vitis vinifera 52 0.0 789
WERAM-Glm-0110 GLYMA10G05080.2 Glycine max 53 0.0 780
WERAM-Met-0020 KEH42376 Medicago truncatula 52 0.0 762
WERAM-Prp-0028 EMJ08419 Prunus persica 52 0.0 760
WERAM-Sol-0129 Solyc10g084650.1.1 Solanum lycopersicum 52 0.0 730
WERAM-Mua-0153 GSMUA_AchrUn_randomP08820_001 Musa acuminata 44 2e-145 513
WERAM-Sot-0034 PGSC0003DMT400028730 Solanum tuberosum 62 3e-145 513
WERAM-Sei-0021 Si005834m Setaria italica 44 7e-128 455
WERAM-Orgl-0067 OGLUM06G29720.1 Oryza glumaepatula 41 2e-124 444
WERAM-Pot-0098 POPTR_0009s00930.1 Populus trichocarpa 41 3e-119 427
WERAM-Lep-0068 LPERR06G23780.2 Leersia perrieri 39 2e-116 417
WERAM-Amt-0092 ERN04758 Amborella trichopoda 51 3e-116 417
WERAM-Orni-0068 ONIVA06G31450.1 Oryza nivara 40 8e-116 415
WERAM-Orb-0069 OBART06G28330.1 Oryza barthii 40 1e-115 415
WERAM-Zem-0076 GRMZM2G134214_P01 Zea mays 39 6e-110 396
WERAM-Tra-0131 Traes_4AL_516398528.1 Triticum aestivum 37 4e-109 393
WERAM-Orbr-0067 OB06G10140.1 Oryza brachyantha 38 2e-108 390
WERAM-Orr-0058 ORUFI06G00030.1 Oryza rufipogon 38 3e-108 390
WERAM-Ors-0053 OS06T0101000-01 Oryza sativa 38 3e-108 390
WERAM-Orm-0055 OMERI06G00010.1 Oryza meridionalis 38 1e-105 382
WERAM-Hov-0034 MLOC_36594.1 Hordeum vulgare 37 5e-105 379
WERAM-Org-0067 ORGLA06G0289000.1 Oryza glaberrima 37 5e-102 369
WERAM-Brd-0016 BRADI1G29167.1 Brachypodium distachyon 44 2e-100 364
WERAM-Tru-0001 TRIUR3_00440-P1 Triticum urartu 38 5e-99 359
WERAM-Php-0096 PP1S412_30V6.1 Physcomitrella patens 36 2e-97 354
WERAM-Orl-0030 KN538785.1_FGP006 Oryza longistaminata 37 1e-94 345
WERAM-Sob-0140 Sb10g031300.1 Sorghum bicolor 36 3e-94 343
WERAM-Orp-0055 OPUNC06G00070.1 Oryza punctata 44 3e-93 340
WERAM-Ori-0069 BGIOSGA022119-PA Oryza indica 37 1e-77 288
WERAM-Sem-0001 EFJ24916 Selaginella moellendorffii 30 7e-34 143
WERAM-Aet-0069 EMT23788 Aegilops tauschii 32 9e-33 139
Created Date 25-Jun-2016