WERAM Information


Tag Content
WERAM ID WERAM-Mum-0051
Ensembl Protein ID ENSMUSP00000023873.5
Uniprot Accession Q8CIG8; ANM5_MOUSE; Q3TNN1; Q9QZS9
Genbank Protein ID NP_001300835.1; NP_001300836.1; NP_038796.2
Protein Name Protein arginine N-methyltransferase 5
Genbank Nucleotide ID NM_001313906.1; NM_001313907.1; NM_013768.3
Gene Name PRMT5
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSMUSG00000023110.12 ENSMUST00000023873.11 ENSMUSP00000023873.5
Details
Type Family Domain Substrates AA References (PMIDs)
HMT PRMT PRMT-type H4R3 R 23133559
Status Reviewed
Classification
Type Family E-value Score Start End
HMT PRMT 4.40e-111 372.6 309 615
Organism Mus musculus
NCBI Taxa ID 10090
Functional Description
(View)
Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA), with a preference for the formation of MMA (PubMed:15485929, PubMed:19584108, PubMed:19858291, PubMed:21917714, PubMed:23133559). Specifically mediates the symmetrical dimethylation of arginine residues in the small nuclear ribonucleoproteins Sm D1 (SNRPD1) and Sm D3 (SNRPD3); such methylation being required for the assembly and biogenesis of snRNP core particles. Methylates SUPT5H and may regulate its transcriptional elongation properties. Mono- and dimethylates arginine residues of myelin basic protein (MBP) in vitro. May play a role in cytokine-activated transduction pathways. Negatively regulates cyclin E1 promoter activity and cellular proliferation (By similarity). Methylates histone H2A and H4 'Arg-3' during germ cell development. Methylates histone H3 'Arg-8', which may repress transcription (PubMed:15485929). Methylates the Piwi proteins (PIWIL1, PIWIL2 and PIWIL4), methylation of Piwi proteins being required for the interaction with Tudor domain-containing proteins and subsequent localization to the meiotic nuage (PubMed:19584108). Methylates RPS10 (By similarity). Attenuates EGF signaling through the MAPK1/MAPK3 pathway acting at 2 levels. First, monomethylates EGFR; this enhances EGFR 'Tyr-1197' phosphorylation and PTPN6 recruitment, eventually leading to reduced SOS1 phosphorylation. Second, methylates RAF1 and probably BRAF, hence destabilizing these 2 signaling proteins and reducing their catalytic activity (PubMed:21917714). Required for induction of E-selectin and VCAM-1, on the endothelial cells surface at sites of inflammation. Methylates HOXA9. Methylates and regulates SRGAP2 which is involved in cell migration and differentiation (By similarity). Acts as a transcriptional corepressor in CRY1-mediated repression of the core circadian component PER1 by regulating the H4R3 dimethylation at the PER1 promoter (PubMed:23133559). Methylates GM130/GOLGA2, regulating Golgi ribbon formation. Methylates H4R3 in genes involved in glioblastomagenesis in a CHTOP- and/or TET1-dependent manner (By similarity). Symmetrically methylates POLR2A, a modification that allows the recruitment to POLR2A of proteins including SMN1/SMN2 and SETX. This is required for resolving RNA-DNA hybrids created by RNA polymerase II, that form R-loop in transcription terminal regions, an important step in proper transcription termination (By similarity).
Domain Profile
  HMT PRMT

              PRMT.txt   2 qqylqslselLesgvyeemlkDevrtdaYreailk...nktllkdk.....vvldvGaGtGiL...slfaakagar..kvyavekspma 77 
q++lq+l+++Les++ye ++kD++++++Y++ai+k +++++++k v++++GaG+G+L sl+aak+++r ++yavek+p+a
ENSMUSP00000023873.5 309 QSPLQPLMDNLESQTYEVFEKDPIKYSQYQQAIYKcllDRVPEEEKetnvqVLMVLGAGRGPLvnaSLRAAKQAERriRLYAVEKNPNA 397
89************************************9999999999999*************************8889********* PP
PRMT.txt 78 kvarkvvkvnglkdrvtvikgkveelelpkekvDiivSEllgsfllnEsllpsvlhardkfLkddglslPdkatlyvapiedtklykee 166
+v++++++++++ ++vtv++++++e+ +p ek+DiivSEllgsf++nE l+p++l+++++fLkddg+s+P ++t+++api+++kly+e
ENSMUSP00000023873.5 398 VVTLENWQFEEWGSQVTVVSSDMREWVAP-EKADIIVSELLGSFADNE-LSPECLDGAQHFLKDDGVSIPGEYTSFLAPISSSKLYNE- 483
*****************************.******************.***************************************. PP
PRMT.txt 167 kaefwksvygvdlsclek.aaikeqfesplVdtldkekllsepkkiftfdiskakesdee.relslelevkrnaslhglaayFdvqfts 253
++c+ek +++++qfe+p+V++l+++++ls+pk++ftf++++++++ ++ r+++le++v++n++lhg+a+yF+++ +
ENSMUSP00000023873.5 484 -----------VRACREKdRDPEAQFEMPYVVRLHNFHQLSAPKPCFTFSHPNRDPMIDNnRYCTLEFPVEVNTVLHGFAGYFETV--L 559
...........78999999**************************************9888*************************..* PP
PRMT.txt 254 ektvvlStaPetkspath.Wkqavlyledpltvkegekisilllarkknsrdvdyel 309
+++++lS++Pet+sp+++ W+++++++++p+tv+eg++i +++++r++ns++v+ye+
ENSMUSP00000023873.5 560 YRDITLSIRPETHSPGMFsWFPIFFPIKQPITVHEGQNI-CVRFWRCSNSKKVWYEW 615
***************************************.8***************9 PP

Protein Sequence
(Fasta)
MAAMAVGGAG GSRVSSGRDL NCVPEIADTL GAVAKQGFDF LCMPVFHPRF KREFIQEPAK 60
NRPGPQTRSD LLLSGRDWNT LIVGKLSPWI HPDSKVEKIR RNSEAAMLQE LNFGAYLGLP 120
AFLLPLNQED NTNLARVLTN HIHTGHHSSM FWMRVPLVAP EDLRDDVIEN APTTHTEEYS 180
GEEKTWMWWH NFRTLCDYSK RIAVALEIGA DLPSNHVIDR WLGEPIKAAI LPTSIFLTNK 240
KGFPVLSKVQ QRLIFRLLKL EVQFIITGTN HHSEKEFCSY LQYLEYLSQN RPPPNAYELF 300
AKGYEDYLQS PLQPLMDNLE SQTYEVFEKD PIKYSQYQQA IYKCLLDRVP EEEKETNVQV 360
LMVLGAGRGP LVNASLRAAK QAERRIRLYA VEKNPNAVVT LENWQFEEWG SQVTVVSSDM 420
REWVAPEKAD IIVSELLGSF ADNELSPECL DGAQHFLKDD GVSIPGEYTS FLAPISSSKL 480
YNEVRACREK DRDPEAQFEM PYVVRLHNFH QLSAPKPCFT FSHPNRDPMI DNNRYCTLEF 540
PVEVNTVLHG FAGYFETVLY RDITLSIRPE THSPGMFSWF PIFFPIKQPI TVHEGQNICV 600
RFWRCSNSKK VWYEWAVTAP VCSSIHNPTG RSYTIGL 637
Nucleotide Sequence
(Fasta)
GAATTGCGGA TTGGTGGGAG CAGCGGCTTG GTCCCTCCGC CTCCGCTCTG GAGCTGTAAA 60
GACGCTCTGG TTGTTAAGGC GACTTGTCCC GCCTCCTGGG GACTCTTCAC CGCTTCGTGA 120
TTGGACTCTA GTATCAAGGA ATCCCGGCGT GGGCCGCGCG AGGGAAAAGA TGGCGGCGAT 180
GGCAGTCGGA GGTGCTGGTG GCAGCCGCGT GTCCAGCGGG AGGGACCTGA ATTGCGTCCC 240
CGAAATAGCT GACACACTGG GTGCTGTGGC CAAGCAGGGG TTTGATTTCC TCTGCATGCC 300
TGTCTTCCAC CCGCGTTTCA AGAGGGAGTT CATTCAGGAA CCTGCTAAGA ATCGGCCTGG 360
CCCCCAGACA CGATCAGACC TACTGCTGTC AGGAAGGGAC TGGAATACGC TAATTGTGGG 420
AAAGCTTTCT CCATGGATTC ATCCAGACTC AAAAGTGGAG AAGATCCGAA GGAACTCTGA 480
AGCGGCTATG TTACAGGAGT TGAATTTTGG GGCATATCTG GGTCTTCCAG CTTTCCTATT 540
GCCCCTTAAT CAGGAAGATA ACACGAATCT GGCCAGAGTT CTGACCAACC ACATCCACAC 600
TGGCCACCAC TCTTCCATGT TCTGGATGAG GGTACCCTTG GTGGCCCCAG AGGACCTGAG 660
AGATGATGTA ATTGAGAATG CCCCGACTAC ACACACAGAG GAGTACAGTG GAGAAGAGAA 720
AACATGGATG TGGTGGCATA ACTTTCGGAC TCTGTGTGAC TATAGCAAGA GAATTGCAGT 780
AGCTCTTGAA ATTGGAGCTG ACCTCCCGTC TAATCACGTC ATTGACCGCT GGCTTGGAGA 840
GCCCATCAAA GCAGCCATTC TCCCCACCAG CATTTTCCTA ACCAACAAGA AAGGATTTCC 900
TGTTCTTTCT AAGGTGCAGC AGAGGCTGAT CTTCCGGCTC CTCAAGTTGG AAGTGCAGTT 960
TATCATCACG GGAACCAACC ACCACTCAGA GAAGGAGTTC TGTTCCTACC TCCAGTACTT 1020
GGAATACTTA AGCCAAAATC GCCCTCCACC CAATGCCTAT GAGCTCTTTG CCAAAGGCTA 1080
TGAAGACTAT CTGCAGTCCC CACTCCAGCC TCTGATGGAC AATCTGGAAT CTCAGACATA 1140
TGAAGTGTTT GAAAAGGACC CCATCAAATA CTCTCAATAT CAGCAGGCTA TTTATAAATG 1200
TTTGCTAGAC CGAGTACCAG AAGAAGAAAA GGAGACCAAT GTCCAGGTAC TTATGGTGCT 1260
GGGTGCAGGC CGGGGTCCTC TTGTGAATGC GTCTCTTCGG GCAGCCAAAC AGGCCGAGCG 1320
GCGGATCAGG CTGTATGCTG TGGAGAAGAA CCCCAATGCT GTGGTGACGC TAGAGAACTG 1380
GCAGTTTGAA GAATGGGGGA GCCAGGTGAC AGTTGTCTCA TCAGACATGC GGGAATGGGT 1440
GGCTCCGGAG AAAGCTGACA TCATTGTCAG TGAGCTTCTG GGTTCCTTTG CCGACAACGA 1500
GCTGTCACCT GAGTGTCTGG ATGGAGCACA GCACTTCCTG AAAGATGATG GCGTGAGCAT 1560
CCCTGGAGAA TACACCTCCT TCCTGGCTCC CATTTCTTCC TCTAAGCTGT ACAATGAGGT 1620
CCGTGCCTGT CGGGAAAAGG ACCGCGATCC TGAGGCACAG TTTGAGATGC CTTATGTGGT 1680
TCGGTTGCAC AACTTCCACC AGCTCTCTGC TCCTAAGCCC TGCTTTACCT TCAGCCATCC 1740
CAACCGAGAT CCTATGATTG ACAACAACCG CTACTGTACC TTGGAGTTTC CTGTGGAGGT 1800
GAACACAGTG CTTCATGGCT TCGCAGGCTA CTTTGAGACT GTGCTTTACC GGGACATCAC 1860
TCTGAGTATC CGCCCAGAGA CTCACTCTCC TGGGATGTTC TCATGGTTCC CCATCTTCTT 1920
CCCCATTAAG CAGCCCATCA CGGTGCACGA AGGCCAGAAC ATCTGTGTGC GTTTCTGGCG 1980
ATGCAGCAAT TCCAAGAAAG TGTGGTACGA GTGGGCGGTG ACGGCCCCCG TCTGTTCTTC 2040
TATTCACAAC CCTACCGGCC GCTCCTATAC CATTGGCCTC TAGCCCTGCA CACAGTGTCA 2100
AAACCTTGGA AGCAGCTCTG AGTTCTCTTC CTACAGCACA GAAGGTGTAG AACATCTGCT 2160
GGTTCAGTTC CTCAGTGAGA CCCTCAGCCG CCAGAGAGGA GCGGTTCCGG CTGCTTTCCT 2220
ACCTAATGTC ATGGTGGCCA ACGGGTAGGC ATTCCCGGAC TGCCAGGCAT GGTGGTGCAT 2280
ACTCTTTATC CCAGCACTCC AGAGGCAGAG GCAGAGGCAG ATGGATCTCT TTAAGTTCAA 2340
GGCTAGCCCG GTCTACCTAG CAAGTTTCAG GCCACCTAGG GCTACATAGT GAGACCCTGT 2400
CTCCAAAAAA CGAAAAAAAA AAAAAAAAAG AACTAGAGGA CACAAGCCAG CAGCAGTCTT 2460
CAGAGCCTCT GGCTTGGGCA TGAGAACTCA GCAGCTCTGG ATGAAGCAAC CTCAGCAGAT 2520
GCTCAGCCGC CAGAGCTCCC CAGGGGTCAG GAGAGAAAGC GAAGGCTGTG GAAGAGCCCG 2580
GGCTGCGTGC ATGAACACTT GACCTGCGCT CTTCTTGCCC TACTCTGTTG TTGTTTGGGT 2640
GGTTTGTGTC TGAAGGAAAC AAATAAAGTG AAGTTACGGC CTCTGCTGCT T 2692
Sequence Source Ensembl
Keyword

KW-0007--Acetylation
KW-0090--Biological rhythms
KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0333--Golgi apparatus
KW-0489--Methyltransferase
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0949--S-adenosyl-L-methionine
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0808--Transferase
--

Interpro

IPR025799--Arg_MeTrfase
IPR007857--Arg_MeTrfase_PRMT5
IPR029063--SAM-dependent_MTases

PROSITE

PS51678--SAM_MT_PRMT

Pfam

PF05185--PRMT5

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005829--C:cytosol
GO:0005794--C:Golgi apparatus
GO:0035097--C:histone methyltransferase complex
GO:0034709--C:methylosome
GO:0005634--C:nucleus
GO:0003682--F:chromatin binding
GO:0001046--F:core promoter sequence-specific DNA binding
GO:0044020--F:histone methyltransferase activity (H4-R3 specific)
GO:0008327--F:methyl-CpG binding
GO:0008168--F:methyltransferase activity
GO:0046982--F:protein heterodimerization activity
GO:0016274--F:protein-arginine N-methyltransferase activity
GO:0035243--F:protein-arginine omega-N symmetric methyltransferase activity
GO:0043021--F:ribonucleoprotein complex binding
GO:0003714--F:transcription corepressor activity
GO:0032922--P:circadian regulation of gene expression
GO:0006353--P:DNA-templated transcription, termination
GO:0042118--P:endothelial cell activation
GO:0090161--P:Golgi ribbon formation
GO:0043985--P:histone H4-R3 methylation
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0018216--P:peptidyl-arginine methylation
GO:0019918--P:peptidyl-arginine methylation, to symmetrical-dimethyl arginine
GO:0035246--P:peptidyl-arginine N-methylation
GO:1904992--P:positive regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway
GO:0000387--P:spliceosomal snRNP assembly

Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Ran-0080 ENSRNOP00000016302.3 Rattus norvegicus 99 0.0 1288
WERAM-Ict-0087 ENSSTOP00000009328.2 Ictidomys tridecemlineatus 98 0.0 1276
WERAM-Paa-0120 ENSPANP00000007685.1 Papio anubis 98 0.0 1271
WERAM-Pat-0052 ENSPTRP00000010432.3 Pan troglodytes 98 0.0 1271
WERAM-Nol-0163 ENSNLEP00000018061.1 Nomascus leucogenys 98 0.0 1271
WERAM-Hos-0059 ENSP00000319169.8 Homo sapiens 98 0.0 1271
WERAM-Gog-0126 ENSGGOP00000010574.2 Gorilla gorilla 98 0.0 1271
WERAM-Poa-0055 ENSPPYP00000006422.1 Pongo abelii 98 0.0 1271
WERAM-Chs-0195 ENSCSAP00000012203.1 Chlorocebus sabaeus 98 0.0 1269
WERAM-Loa-0053 ENSLAFP00000004069.3 Loxodonta africana 97 0.0 1269
WERAM-Cap-0150 ENSCPOP00000012643.2 Cavia porcellus 97 0.0 1269
WERAM-Aim-0084 ENSAMEP00000007814.1 Ailuropoda melanoleuca 97 0.0 1268
WERAM-Mup-0079 ENSMPUP00000007080.1 Mustela putorius furo 97 0.0 1268
WERAM-Fec-0073 ENSFCAP00000006166.2 Felis catus 97 0.0 1268
WERAM-Myl-0144 ENSMLUP00000011765.2 Myotis lucifugus 97 0.0 1267
WERAM-Caf-0126 ENSCAFP00000016548.3 Canis familiaris 97 0.0 1267
WERAM-Sus-0208 ENSSSCP00000021361.1 Sus scrofa 97 0.0 1266
WERAM-Ova-0208 ENSOARP00000020834.1 Ovis aries 97 0.0 1266
WERAM-Ocp-0009 ENSOPRP00000001028.1 Ochotona princeps 97 0.0 1266
WERAM-Bot-0104 ENSBTAP00000014463.3 Bos taurus 97 0.0 1266
WERAM-Eqc-0108 ENSECAP00000012626.1 Equus caballus 97 0.0 1266
WERAM-Dan-0019 ENSDNOP00000001998.3 Dasypus novemcinctus 97 0.0 1264
WERAM-Caj-0094 ENSCJAP00000015606.2 Callithrix jacchus 97 0.0 1231
WERAM-Tut-0017 ENSTTRP00000001417.1 Tursiops truncatus 97 0.0 1228
WERAM-Dio-0043 ENSDORP00000004614.1 Dipodomys ordii 94 0.0 1217
WERAM-Mam-0006 ENSMMUP00000001390.2 Macaca mulatta 98 0.0 775
WERAM-Cae-0052 C34E10.5.3 Caenorhabditis elegans 34 2e-86 318
WERAM-Gam-0095 ENSGMOP00000009890.1 Gadus morhua 32 8e-08 56.6
WERAM-Orla-0188 ENSORLP00000021655.1 Oryzias latipes 30 2e-07 55.5
WERAM-Orb-0047 OBART04G29630.1 Oryza barthii 28 2e-07 55.1
WERAM-Gaa-0056 ENSGACP00000007346.1 Gasterosteus aculeatus 30 2e-07 54.7
WERAM-Orn-0071 ENSONIP00000007885.1 Oreochromis niloticus 30 3e-07 54.7
WERAM-Tar-0150 ENSTRUP00000032123.1 Takifugu rubripes 29 8e-07 53.1
WERAM-Pof-0236 ENSPFOP00000019692.1 Poecilia formosa 30 2e-06 52.0
WERAM-Dar-0046 ENSDARP00000016959.6 Danio rerio 30 2e-06 51.6
WERAM-Xim-0025 ENSXMAP00000002557.1 Xiphophorus maculatus 30 3e-06 51.6
WERAM-Xet-0064 ENSXETP00000020625.3 Xenopus tropicalis 25 4e-06 50.8
Created Date 25-Jun-2016