WERAM Information

Tag Content
WERAM ID WERAM-Arl-0071
Ensembl Protein ID fgenesh2_kg.3__790__AT3G07610.1
Gene Name IBM1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
fgenesh2_kg.3__790__AT3G07610.1 fgenesh2_kg.3__790__AT3G07610.1 fgenesh2_kg.3__790__AT3G07610.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM2 3.30e-89 298.8 631 859
Organism Arabidopsis lyrata
Domain Profile
  HDM JHDM2
                        JHDM2.txt   4 krdgklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvy.............vgilkkkw 68 
                                      +++g+lNLa+klp+n+++pd+gPk+y+A+G+a+e +r++++t+lh+d+sdavnil++             +g lkkk+
  fgenesh2_kg.3__790__AT3G07610.1 631 PVNGPLNLAVKLPQNCLKPDMGPKTYVASGFAQEFGRGDSVTKLHCDMSDAVNILTHisevpindkmqdgMGKLKKKH 708
                                      479*************************************************************************** PP
                        JHDM2.txt  69 aeedlkellksieee....eldevtrkrvqdpkekpgalWhifaakdaekirellekvskeqga....evppdhdpih 138
                                      ae+dlkel++s++++    e++e++r++vq++++++galW+if+++d++k+++++ek++ke+++    +v++  +pih
  fgenesh2_kg.3__790__AT3G07610.1 709 AEQDLKELYSSVANQeemmEILENSRQQVQNVETDDGALWDIFRREDIPKLESYIEKHHKEFRHlyccPVSQIAHPIH 786
                                      ************998889999*******************************************9999999******* PP
                        JHDM2.txt 139 dqswyldrklrkrLfeeyGvegwtlvQklgdavlipagapHqvqnlkscvkvaedFvsPEnvkecfrltkeyr 211
                                      dq++yl+r+++++L+eeyG+e+wt++Qklgdavlip+g+pHqv+nlksc kva dFvsPEnv+ec++ltk+yr
  fgenesh2_kg.3__790__AT3G07610.1 787 DQNFYLTRYHIMKLKEEYGIEPWTFNQKLGDAVLIPVGCPHQVRNLKSCTKVACDFVSPENVSECLHLTKQYR 859
                                      ************************************************************************8 PP
Protein Sequence
(Fasta)		MDSVEENGRG GLRRQRRVST KLANYVDPPT DDEEDGGSNK RKGKRGVYGP RKKTPKEDEE 60
KQKNEIDEAN GVAGLVKEKR AATKIVKGKD LITEASGSKP MLAKGKRTKK EDEIDGEIPT 120
KPGKKPKTTV DERIIGYRPD NMCHQCQKSD RIVERCQTCN SKRYCHPCLD TWYPLIAKED 180
VAKKCMFCSS ICNCRACLRL DTKLKGINSK LILNEEEKVQ SSKFILRSLL PHLKGINDEQ 240
VAEKEVEAKI SGLKFEEVRP QDAKAFPDER LYCDICKTSI YDLHRNCKAC NCDICLSCCL 300
EIRNGKALAC KEDVSWNYIN RGLEYEHGEE GEVIEKAGNK LDDKLKDKPK DKPDDELDDK 360
PKGKPKGKPK GRPDDKPKGK PKGKLKGKQD DKPDDKPKVK PINTDHMKYP SMWKANESGI 420
ITCYCGAGEL VLKRLLPDGW ISELVNRVEK TAEASDLLNL PETVLEQCPC SNYDSHIDID 480
SSNLLKAACR EGSEDNYLYS PSVWDVQQDD LKHFQHHWVK GEPVIVRNVL EATSGLSWEP 540
MVMFRACRQI SHVQHETLTD VDAVDCLDFC QVKVTLHEFF TGYTDGRYDR MGWPLVLKLK 600
DWPPAKVFKD SLPRHAEEFL CSLPLKHYTH PVNGPLNLAV KLPQNCLKPD MGPKTYVASG 660
FAQEFGRGDS VTKLHCDMSD AVNILTHISE VPINDKMQDG MGKLKKKHAE QDLKELYSSV 720
ANQEEMMEIL ENSRQQVQNV ETDDGALWDI FRREDIPKLE SYIEKHHKEF RHLYCCPVSQ 780
IAHPIHDQNF YLTRYHIMKL KEEYGIEPWT FNQKLGDAVL IPVGCPHQVR NLKSCTKVAC 840
DFVSPENVSE CLHLTKQYRL LPPNHFAKED KLAVKKMIIH AVDKALRDLS GEKSPEPKEK 900
KRSTNSRKTT ARTVVKALKE LPPSEKKSSE AAEEEISNGI VNAIDKAPKD FPPSEQKSSE 960
AEEEISNGIV NAMDKALENI SSSEKKSPEE EGVKRPKIVR TYERRKKQRS EKTNA 1015
Nucleotide Sequence
(Fasta)		ATGGATTCTG TGGAGGAGAA CGGACGCGGT GGTCTCCGTA GGCAGCGGAG GGTTTCTACG 60
AAGCTAGCGA ATTACGTAGA TCCTCCGACT GACGACGAAG AAGATGGAGG ATCTAACAAG 120
CGAAAGGGCA AAAGGGGTGT ATATGGGCCT CGGAAAAAGA CACCGAAGGA AGACGAGGAG 180
AAGCAAAAGA ACGAAATTGA TGAAGCAAAC GGAGTCGCTG GTCTGGTGAA GGAAAAGAGA 240
GCCGCTACTA AGATTGTGAA AGGCAAAGAC CTCATTACTG AAGCTTCTGG AAGCAAGCCC 300
ATGCTAGCAA AGGGAAAAAG GACTAAGAAG GAGGATGAAA TCGATGGTGA GATTCCAACT 360
AAGCCGGGCA AGAAGCCCAA GACTACAGTG GACGAGAGAA TCATTGGTTA CAGACCGGAC 420
AATATGTGCC ACCAATGTCA AAAGAGCGAT AGGATTGTTG AACGGTGTCA GACCTGCAAT 480
AGCAAGCGTT ATTGTCACCC TTGCTTAGAC ACTTGGTATC CACTTATAGC AAAAGAAGAT 540
GTTGCCAAGA AATGCATGTT CTGCTCTAGT ATTTGCAATT GCAGAGCATG CTTGCGTCTA 600
GATACTAAAT TGAAAGGGAT AAATTCGAAG CTCATCCTCA ATGAGGAAGA AAAGGTTCAA 660
TCCTCTAAGT TTATTCTGCG GAGTCTTCTC CCACATCTAA AAGGAATAAA TGATGAACAA 720
GTCGCAGAGA AGGAAGTTGA GGCCAAAATA TCAGGACTGA AGTTTGAAGA GGTTAGACCG 780
CAAGACGCTA AAGCTTTCCC CGATGAAAGA CTATACTGTG ATATCTGCAA GACTTCTATC 840
TATGATCTCC ATAGGAATTG CAAGGCCTGT AATTGTGATA TCTGCCTTAG CTGTTGCCTT 900
GAGATCCGCA ATGGAAAGGC TCTGGCATGT AAGGAGGATG TGTCTTGGAA TTATATTAAC 960
CGAGGTTTAG AGTATGAACA TGGAGAAGAA GGAGAAGTTA TTGAAAAGGC GGGGAATAAG 1020
CTAGATGATA AGCTGAAAGA TAAGCCGAAA GATAAGCCGG ATGATGAGCT GGATGATAAG 1080
CCGAAGGGTA AGCCAAAGGG TAAACCGAAA GGTAGGCCGG ATGATAAGCC GAAGGGTAAG 1140
CCAAAGGGTA AACTGAAGGG TAAGCAGGAT GATAAACCGG ATGATAAGCC GAAGGTTAAG 1200
CCGATTAATA CAGACCATAT GAAGTACCCT TCTATGTGGA AAGCAAATGA ATCTGGGATC 1260
ATTACTTGTT ATTGTGGTGC TGGGGAGTTA GTGTTGAAAC GACTACTTCC GGATGGTTGG 1320
ATATCTGAGT TGGTCAACAG AGTAGAAAAA ACTGCTGAAG CTAGCGATCT TTTGAATTTA 1380
CCTGAAACGG TTTTGGAGCA ATGCCCTTGT TCTAACTATG ACAGTCATAT TGACATAGAC 1440
AGCTCTAATT TGTTGAAAGC TGCTTGTCGA GAAGGTTCAG AAGACAATTA TCTATACTCT 1500
CCAAGTGTAT GGGATGTTCA ACAAGATGAT TTGAAGCATT TTCAGCACCA TTGGGTAAAA 1560
GGCGAGCCTG TGATTGTGAG AAATGTGCTT GAAGCTACAT CTGGTTTAAG CTGGGAACCA 1620
ATGGTAATGT TTCGTGCCTG CCGCCAGATA AGCCATGTCC AGCATGAAAC ACTTACGGAT 1680
GTTGATGCTG TTGATTGTTT GGACTTCTGT CAGGTAAAAG TTACTCTTCA TGAATTTTTT 1740
ACTGGATACA CGGATGGCCG ATATGATCGT ATGGGTTGGC CACTAGTTCT GAAACTGAAA 1800
GATTGGCCTC CAGCTAAAGT CTTCAAAGAT AGCTTGCCAC GTCATGCTGA GGAGTTCTTA 1860
TGTAGTTTGC CTTTGAAGCA TTACACTCAC CCGGTTAATG GACCTTTGAA TCTTGCTGTC 1920
AAGCTTCCCC AAAACTGCTT GAAGCCAGAC ATGGGACCAA AGACGTACGT TGCTTCTGGA 1980
TTTGCTCAAG AATTTGGCCG TGGAGATTCT GTTACTAAGC TCCATTGCGA CATGTCTGAT 2040
GCGGTGAATA TTTTGACGCA CATATCTGAA GTGCCCATTA ACGACAAGAT GCAAGATGGA 2100
ATGGGGAAAC TGAAAAAGAA GCATGCCGAA CAAGATCTCA AGGAGCTGTA TAGCTCAGTA 2160
GCTAACCAGG AGGAAATGAT GGAGATTCTT GAAAATTCCA GACAACAAGT CCAAAATGTT 2220
GAAACTGATG ATGGAGCTCT TTGGGACATT TTCCGTAGAG AAGATATTCC TAAATTAGAA 2280
AGTTACATTG AGAAACATCA CAAGGAGTTC AGACATCTCT ACTGCTGTCC TGTGTCTCAG 2340
ATTGCTCATC CTATACATGA CCAGAATTTC TATCTGACGC GGTATCATAT AATGAAGCTG 2400
AAAGAAGAAT ATGGCATTGA ACCTTGGACC TTTAATCAGA AGCTTGGGGA TGCTGTTTTA 2460
ATACCTGTAG GTTGCCCTCA TCAAGTTAGA AATTTGAAGT CCTGCACAAA GGTAGCTTGT 2520
GACTTTGTCT CACCTGAAAA TGTCAGCGAG TGTTTACACT TGACAAAACA GTATCGTCTA 2580
CTTCCACCAA ATCATTTTGC AAAAGAAGAC AAGTTAGCGG TTAAGAAGAT GATAATCCAT 2640
GCAGTTGATA AAGCTCTCAG AGACTTAAGT GGAGAGAAGT CTCCAGAACC CAAAGAGAAG 2700
AAGAGAAGTA CGAATTCAAG GAAGACAACA GCCAGGACAG TTGTTAAGGC TCTCAAAGAA 2760
TTACCTCCAA GTGAAAAGAA GTCTTCGGAA GCAGCTGAAG AGGAGATATC AAATGGGATA 2820
GTCAATGCAA TCGATAAGGC TCCCAAGGAC TTCCCTCCAA GTGAACAGAA GTCTTCCGAA 2880
GCCGAAGAGG AGATATCAAA TGGGATAGTC AATGCAATGG ATAAGGCTCT CGAAAACATA 2940
TCTTCAAGCG AAAAGAAGTC TCCGGAAGAG GAAGGGGTGA AAAGACCTAA GATTGTGAGG 3000
ACATATGAGC GCAGAAAAAA GCAGAGAAGT GAGAAGACCA ACGCGTAG 3049
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Art-0066 AT3G07610.1 Arabidopsis thaliana 90 0.0 1058
WERAM-Brr-0149 Bra029664.1-P Brassica rapa 71 0.0 749
WERAM-Bro-0103 Bo5g141320.1 Brassica oleracea 72 0.0 748
WERAM-Pot-0063 POPTR_0005s09360.1 Populus trichocarpa 59 2e-169 593
WERAM-Met-0036 AES62955 Medicago truncatula 57 5e-162 569
WERAM-Glm-0245 GLYMA19G12090.1 Glycine max 50 7e-159 558
WERAM-Thc-0088 EOY14163 Theobroma cacao 54 5e-153 539
WERAM-Sot-0046 PGSC0003DMT400042379 Solanum tuberosum 53 2e-148 523
WERAM-Prp-0037 EMJ15852 Prunus persica 51 2e-143 507
WERAM-Sob-0006 Sb01g015210.1 Sorghum bicolor 49 1e-142 504
WERAM-Sol-0031 Solyc02g082400.2.1 Solanum lycopersicum 51 2e-142 504
WERAM-Sei-0128 Si034182m Setaria italica 50 3e-142 503
WERAM-Zem-0137 GRMZM2G417089_P01 Zea mays 48 1e-141 501
WERAM-Viv-0067 VIT_10s0116g00960.t01 Vitis vinifera 51 2e-141 501
WERAM-Lep-0100 LPERR09G06290.1 Leersia perrieri 50 4e-131 466
WERAM-Orm-0094 OMERI09G07170.1 Oryza meridionalis 50 2e-128 457
WERAM-Php-0101 PP1S444_19V6.1 Physcomitrella patens 44 1e-123 441
WERAM-Tra-0233 Traes_5DL_9DCF29857.2 Triticum aestivum 48 2e-123 441
WERAM-Aet-0048 EMT13865 Aegilops tauschii 48 2e-123 441
WERAM-Orp-0097 OPUNC09G07740.1 Oryza punctata 49 3e-123 440
WERAM-Brd-0109 BRADI4G29617.1 Brachypodium distachyon 54 4e-123 440
WERAM-Orgl-0039 OGLUM03G23040.1 Oryza glumaepatula 49 4e-123 440
WERAM-Orbr-0109 OB09G15930.1 Oryza brachyantha 50 4e-123 440
WERAM-Orb-0104 OBART09G09130.1 Oryza barthii 49 8e-123 439
WERAM-Orr-0107 ORUFI09G09860.1 Oryza rufipogon 49 1e-122 438
WERAM-Orl-0059 KN539156.1_FGP008 Oryza longistaminata 49 1e-122 438
WERAM-Ori-0112 BGIOSGA030706-PA Oryza indica 49 3e-122 437
WERAM-Orni-0101 ONIVA09G08110.1 Oryza nivara 49 4e-122 436
WERAM-Tru-0042 TRIUR3_19853-P1 Triticum urartu 48 1e-121 435
WERAM-Ors-0092 OS09T0393200-01 Oryza sativa 53 4e-114 410
WERAM-Hov-0014 MLOC_13090.1 Hordeum vulgare 52 5e-98 357
WERAM-Mua-0058 GSMUA_Achr3P14190_001 Musa acuminata 46 5e-93 340
WERAM-Org-0037 ORGLA03G0207400.1 Oryza glaberrima 51 7e-86 316
WERAM-Amt-0026 ERN14091 Amborella trichopoda 49 1e-84 312
WERAM-Tar-0009 ENSTRUP00000002076.1 Takifugu rubripes 37 7e-60 230
WERAM-Gaa-0189 ENSGACP00000023958.1 Gasterosteus aculeatus 36 8e-58 223
WERAM-Ptv-0087 ENSPVAP00000007885.1 Pteropus vampyrus 36 8e-58 223
WERAM-Mup-0101 ENSMPUP00000009333.1 Mustela putorius furo 36 9e-58 223
WERAM-Bot-0099 ENSBTAP00000013278.4 Bos taurus 36 9e-58 223
WERAM-Hos-0102 ENSP00000326563.5 Homo sapiens 36 9e-58 223
WERAM-Gog-0012 ENSGGOP00000000822.2 Gorilla gorilla 36 9e-58 223
WERAM-Caf-0016 ENSCAFP00000001774.3 Canis familiaris 36 9e-58 223
WERAM-Orc-0080 ENSOCUP00000007280.2 Oryctolagus cuniculus 36 9e-58 223
WERAM-Aim-0189 ENSAMEP00000017468.1 Ailuropoda melanoleuca 36 9e-58 223
WERAM-Dan-0091 ENSDNOP00000009144.3 Dasypus novemcinctus 36 1e-57 223
WERAM-Fec-0021 ENSFCAP00000001589.3 Felis catus 36 1e-57 223
WERAM-Loa-0020 ENSLAFP00000001269.3 Loxodonta africana 36 1e-57 223
WERAM-Mam-0003 ENSMMUP00000000618.2 Macaca mulatta 36 1e-57 223
WERAM-Pat-0141 ENSPTRP00000029560.2 Pan troglodytes 36 1e-57 223
WERAM-Ova-0174 ENSOARP00000017606.1 Ovis aries 36 1e-57 223
WERAM-Poa-0141 ENSPPYP00000017696.1 Pongo abelii 36 1e-57 223
WERAM-Otg-0093 ENSOGAP00000008081.2 Otolemur garnettii 36 1e-57 223
WERAM-Nol-0092 ENSNLEP00000010895.1 Nomascus leucogenys 36 1e-57 223
WERAM-Eqc-0143 ENSECAP00000015928.1 Equus caballus 36 1e-57 223
WERAM-Myl-0184 ENSMLUP00000015336.2 Myotis lucifugus 36 1e-57 222
WERAM-Mim-0018 ENSMICP00000001555.1 Microcebus murinus 36 1e-57 222
WERAM-Chs-0157 ENSCSAP00000009298.1 Chlorocebus sabaeus 36 1e-57 222
WERAM-Cap-0028 ENSCPOP00000002138.2 Cavia porcellus 36 1e-57 222
WERAM-Asm-0165 ENSAMXP00000016507.1 Astyanax mexicanus 36 1e-57 222
WERAM-Ran-0218 ENSRNOP00000067649.2 Rattus norvegicus 36 2e-57 222
WERAM-Mod-0100 ENSMODP00000015209.4 Monodelphis domestica 36 2e-57 222
WERAM-Sah-0129 ENSSHAP00000013821.1 Sarcophilus harrisii 36 2e-57 222
WERAM-Sus-0108 ENSSSCP00000015245.2 Sus scrofa 36 2e-57 222
WERAM-Mum-0157 ENSMUSP00000037628.7 Mus musculus 36 2e-57 221
WERAM-Paa-0043 ENSPANP00000002578.1 Papio anubis 36 3e-57 221
WERAM-Caj-0074 ENSCJAP00000012191.1 Callithrix jacchus 36 5e-57 220
WERAM-Ten-0123 ENSTNIP00000013426.1 Tetraodon nigroviridis 36 6e-57 220
WERAM-Orn-0157 ENSONIP00000016309.1 Oreochromis niloticus 36 6e-57 220
WERAM-Anc-0075 ENSACAP00000007027.2 Anolis carolinensis 36 7e-57 220
WERAM-Orla-0053 ENSORLP00000006841.1 Oryzias latipes 35 8e-57 219
WERAM-Lac-0170 ENSLACP00000020024.1 Latimeria chalumnae 35 1e-56 219
WERAM-Gam-0008 ENSGMOP00000000972.1 Gadus morhua 35 3e-56 218
WERAM-Leo-0085 ENSLOCP00000011676.1 Lepisosteus oculatus 36 3e-56 218
WERAM-Dar-0145 ENSDARP00000084278.5 Danio rerio 36 4e-56 218
WERAM-Pes-0047 ENSPSIP00000007045.1 Pelodiscus sinensis 36 5e-56 217
WERAM-Meg-0102 ENSMGAP00000010078.1 Meleagris gallopavo 35 5e-56 217
WERAM-Ora-0091 ENSOANP00000016437.2 Ornithorhynchus anatinus 36 5e-56 217
WERAM-Xim-0102 ENSXMAP00000009010.1 Xiphophorus maculatus 35 5e-56 217
WERAM-Gaga-0080 ENSGALP00000012399.4 Gallus gallus 35 6e-56 217
WERAM-Pof-0098 ENSPFOP00000008824.2 Poecilia formosa 35 7e-56 216
WERAM-Anp-0111 ENSAPLP00000012780.1 Anas platyrhynchos 35 7e-56 216
WERAM-Pem-0063 ENSPMAP00000006992.1 Petromyzon marinus 36 8e-56 216
WERAM-Fia-0049 ENSFALP00000003539.1 Ficedula albicollis 35 8e-56 216
WERAM-Xet-0043 ENSXETP00000014664.3 Xenopus tropicalis 35 1e-55 216
WERAM-Tag-0001 ENSTGUP00000000018.1 Taeniopygia guttata 36 1e-55 216
Created Date 25-Jun-2016