WERAM Information

Tag Content
WERAM ID WERAM-Arl-0040
Ensembl Protein ID fgenesh1_pm.C_scaffold_8000499
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
fgenesh1_pm.C_scaffold_8000499 fgenesh1_pm.C_scaffold_8000499 fgenesh1_pm.C_scaffold_8000499
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM2 2.80e-86 289.2 541 769
Organism Arabidopsis lyrata
Domain Profile
  HDM JHDM2
                       JHDM2.txt   4 krdgklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvy.............vgilkkkwa 69 
                                     +++g+lNLa+klpkn+++pd+gPk+y AyG+a+e +r++++t+lh+d+sdavn+l++             ++ lkkk+a
  fgenesh1_pm.C_scaffold_8000499 541 PTNGPLNLAVKLPKNCLKPDMGPKTYIAYGFAQEFGRGDSVTKLHCDMSDAVNVLTHisevpirrekqpdIEKLKKKHA 619
                                     469**************************************************************************** PP
                       JHDM2.txt  70 eedlkellksieee....eldevtrkrvqdpkekpgalWhifaakdaekirellekvskeqga....evppdhdpihdq 140
                                     e+dlkel++s++++    e++e + + v+++++++galW+if+++d++k++++l+k+ ke+++    + ++  +pihdq
  fgenesh1_pm.C_scaffold_8000499 620 EQDLKELYSSVANKeemmEILEKSSQEVENVETDDGALWDIFRREDIPKLEHYLQKHYKEFRHfyccPLSQIAHPIHDQ 698
                                     ************9988889999****************************************9999999999******* PP
                       JHDM2.txt 141 swyldrklrkrLfeeyGvegwtlvQklgdavlipagapHqvqnlkscvkvaedFvsPEnvkecfrltkeyr 211
                                     ++yl+r+++++L+eeyG+e+wt++Qklgdavlip+g+pHqv+nlksc kva dFvsPEnv+ec+rltk+yr
  fgenesh1_pm.C_scaffold_8000499 699 TFYLTRYHIAKLKEEYGIEPWTFNQKLGDAVLIPVGCPHQVRNLKSCTKVALDFVSPENVSECLRLTKQYR 769
                                     **********************************************************************8 PP
Protein Sequence
(Fasta)		MDSAEEEGAR AEEEIGRAGL CRQRRASTKM GIYVDTLTDD DEYERPKRKG KKGVYMARKK 60
TTKEDEEKQN NEIDQNVTVE EANGATSKTR VNTDSITEQS SNKRRKTVNK DNKHRQSNMC 120
HQCQRNDRGQ VVRCQNCKKK RFRLPCLRTW YPNIAKEDIA KKCPCCCSIC CCRRCLRLDT 180
KIKGIKSNLE VSKDAKIQFS KYTLRWLLPH MKEINDEQIA EKELEAKISG LEFEEVKPQD 240
AESPPDERLT CDICKTSIFD LHRSCEDCSC DICLTCCLEI RNGKPQACKE DVSCNYINRG 300
LEYAHGGKGQ VIEMPSDEPN DSKDHMKDPS MWKANEAGII TCYCGAENLV LKRLLPDGWV 360
SDLYKQVEKS AEAGKLLDLS ETVSERCPCF KSDGHIDMDN GKVFKAACRE GSEDNYIYCP 420
SVRDVQQDDL KHFQHHWVKG EPVVMRNVLE ATSGLSWEPM VTYRACRLIR NKKHETLLDV 480
NSTDCLDFCE VEITLHEFFT GYIEGRYDRM GWPRVLKLKD WPHLRVLNFL CSLPLKQYTH 540
PTNGPLNLAV KLPKNCLKPD MGPKTYIAYG FAQEFGRGDS VTKLHCDMSD AVNVLTHISE 600
VPIRREKQPD IEKLKKKHAE QDLKELYSSV ANKEEMMEIL EKSSQEVENV ETDDGALWDI 660
FRREDIPKLE HYLQKHYKEF RHFYCCPLSQ IAHPIHDQTF YLTRYHIAKL KEEYGIEPWT 720
FNQKLGDAVL IPVGCPHQVR NLKSCTKVAL DFVSPENVSE CLRLTKQYRL LPPNHFAKED 780
KLGVKKMIIY AVDRALKDLS GKESTEPEET KNLKKGKKSK VIVKAVDKAL KDLPPSEKSS 840
ETVEEKSNGI VNPIDKALQD LPPTEKKCYP QLKRSELLLI FSLPTKSISN LSFFSSPEGE 900
GKKKAEIVKT YERRKKQ 917
Nucleotide Sequence
(Fasta)		ATGGATTCTG CAGAGGAAGA AGGTGCTAGG GCTGAAGAAG AGATCGGACG CGCTGGTTTG 60
TGTAGGCAGC GGAGAGCTTC TACGAAGATG GGGATTTACG TTGACACTCT GACTGACGAC 120
GACGAATATG AGAGACCCAA GCGAAAAGGC AAAAAGGGGG TATATATGGC TCGGAAAAAG 180
ACTACCAAGG AAGACGAAGA GAAGCAAAAT AACGAAATCG ATCAAAATGT TACGGTTGAA 240
GAAGCGAACG GAGCCACTTC TAAGACGAGG GTTAACACAG ACTCAATTAC TGAGCAATCG 300
AGCAACAAGC GTAGAAAAAC AGTTAACAAA GACAATAAAC ACCGCCAGTC CAATATGTGT 360
CATCAATGTC AACGGAACGA TAGAGGGCAA GTTGTGCGGT GTCAGAATTG CAAGAAAAAG 420
AGATTTCGCC TCCCATGCTT AAGAACTTGG TACCCCAACA TAGCAAAAGA AGATATAGCC 480
AAGAAATGCC CATGCTGCTG TAGCATTTGC TGTTGCAGAA GATGCTTGCG TCTAGATACT 540
AAAATAAAAG GGATAAAGTC GAATCTCGAG GTCAGCAAGG ATGCAAAAAT TCAATTCTCT 600
AAATATACTT TGCGGTGGCT TCTCCCACAT ATGAAGGAAA TAAATGATGA ACAAATTGCT 660
GAGAAGGAAC TTGAGGCAAA GATATCTGGA CTGGAGTTTG AAGAGGTGAA GCCCCAAGAC 720
GCTGAATCTC CCCCCGATGA AAGACTAACT TGTGATATCT GCAAGACTTC GATCTTTGAT 780
CTTCATAGGA GTTGCGAGGA CTGTTCTTGT GATATCTGCC TTACTTGTTG CCTTGAGATC 840
CGCAATGGAA AGCCTCAGGC ATGTAAGGAG GATGTGTCTT GCAATTATAT TAACCGAGGT 900
TTAGAGTATG CACATGGAGG AAAAGGACAA GTTATTGAAA TGCCGAGTGA TGAACCGAAT 960
GATAGCAAAG ACCATATGAA GGACCCATCT ATGTGGAAAG CAAATGAAGC TGGAATCATT 1020
ACTTGTTATT GTGGTGCCGA GAATTTAGTG TTGAAACGCC TACTTCCGGA TGGTTGGGTA 1080
TCTGATTTGT ATAAGCAAGT AGAAAAATCT GCTGAAGCTG GCAAACTTTT GGATTTGTCT 1140
GAAACGGTTT CGGAACGATG CCCTTGTTTT AAGTCTGACG GTCATATCGA CATGGACAAC 1200
GGTAAAGTGT TCAAGGCTGC TTGTCGAGAA GGTTCAGAGG ACAATTATAT ATATTGTCCA 1260
AGTGTTAGAG ATGTTCAACA AGATGATCTG AAGCATTTTC AACATCATTG GGTCAAAGGT 1320
GAGCCTGTGG TTATGAGGAA TGTGCTTGAG GCTACATCTG GTTTAAGCTG GGAACCAATG 1380
GTAACATATC GTGCCTGCCG TCTGATACGC AACAAAAAGC ATGAAACACT TCTAGATGTT 1440
AATTCTACTG ATTGTCTGGA CTTCTGTGAG GTAGAAATTA CTCTTCATGA ATTTTTCACC 1500
GGATACATAG AGGGCAGATA TGATCGAATG GGTTGGCCAC GTGTTCTAAA ATTGAAAGAT 1560
TGGCCTCATC TAAGAGTTCT TAACTTCTTA TGCAGTTTGC CTTTGAAGCA GTACACTCAC 1620
CCAACTAATG GACCTTTGAA TCTGGCTGTC AAACTGCCTA AAAATTGCTT GAAGCCAGAC 1680
ATGGGGCCAA AGACGTATAT TGCTTATGGA TTTGCGCAAG AATTTGGCCG TGGAGATTCT 1740
GTTACTAAGC TCCATTGCGA CATGTCTGAT GCGGTAAATG TTTTGACGCA CATATCTGAA 1800
GTGCCCATTA GAAGGGAAAA GCAACCTGAT ATTGAAAAAC TGAAAAAGAA GCATGCTGAA 1860
CAAGATCTCA AGGAGCTGTA TTCCTCAGTA GCTAACAAGG AGGAAATGAT GGAGATTCTT 1920
GAAAAGTCTA GCCAAGAAGT CGAAAATGTT GAGACCGATG ATGGAGCTCT TTGGGACATT 1980
TTCCGTAGAG AAGACATTCC AAAATTAGAA CATTACCTTC AGAAACATTA CAAGGAGTTT 2040
AGACATTTCT ACTGTTGCCC TTTGTCCCAG ATTGCTCATC CAATACATGA CCAAACGTTC 2100
TATTTGACAC GGTATCATAT AGCGAAGCTG AAAGAAGAAT ATGGCATTGA ACCATGGACC 2160
TTTAATCAGA AGCTTGGGGA TGCTGTCTTA ATACCTGTAG GGTGCCCACA TCAAGTCAGA 2220
AATTTGAAGT CTTGCACAAA GGTAGCGCTT GACTTTGTCT CACCTGAAAA TGTCAGCGAG 2280
TGTTTACGCT TGACAAAACA ATATCGTCTA CTTCCACCAA ATCATTTTGC TAAAGAAGAC 2340
AAGTTAGGGG TAAAGAAGAT GATAATTTAT GCAGTTGATA GGGCTCTCAA AGACTTAAGT 2400
GGAAAGGAGT CTACAGAACC CGAAGAGACG AAAAATTTAA AGAAAGGGAA GAAGTCAAAG 2460
GTGATAGTGA AGGCCGTCGA TAAGGCTCTC AAAGACTTAC CTCCAAGTGA AAAGTCTTCG 2520
GAAACCGTAG AGGAGAAATC AAACGGGATA GTCAATCCAA TCGATAAGGC TCTCCAAGAC 2580
TTACCCCCAA CTGAAAAGAA GTGTTACCCC CAACTGAAAA GAAGTGAGCT TTTACTTATC 2640
TTCTCACTAC CTACAAAAAG CATTAGTAAT CTGAGTTTCT TTTCGTCTCC GGAAGGGGAA 2700
GGGAAGAAAA AAGCAGAGAT AGTGAAGACA TACGAGCGTA GAAAAAAGCA ATGA 2755
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Art-0066 AT3G07610.1 Arabidopsis thaliana 64 0.0 1149
WERAM-Brr-0149 Bra029664.1-P Brassica rapa 69 0.0 968
WERAM-Bro-0103 Bo5g141320.1 Brassica oleracea 62 0.0 967
WERAM-Pot-0063 POPTR_0005s09360.1 Populus trichocarpa 53 0.0 735
WERAM-Met-0036 AES62955 Medicago truncatula 51 0.0 716
WERAM-Thc-0088 EOY14163 Theobroma cacao 49 0.0 697
WERAM-Glm-0245 GLYMA19G12090.1 Glycine max 48 0.0 689
WERAM-Viv-0065 VIT_10s0042g00830.t01 Vitis vinifera 48 0.0 631
WERAM-Zem-0137 GRMZM2G417089_P01 Zea mays 44 3e-178 623
WERAM-Sei-0128 Si034182m Setaria italica 42 1e-171 601
WERAM-Sot-0046 PGSC0003DMT400042379 Solanum tuberosum 47 3e-171 600
WERAM-Sob-0006 Sb01g015210.1 Sorghum bicolor 42 8e-171 598
WERAM-Sol-0121 Solyc09g091490.1.1 Solanum lycopersicum 43 1e-165 581
WERAM-Prp-0037 EMJ15852 Prunus persica 46 5e-160 562
WERAM-Orgl-0039 OGLUM03G23040.1 Oryza glumaepatula 43 3e-156 550
WERAM-Orl-0076 KN539615.1_FGP001 Oryza longistaminata 41 4e-156 550
WERAM-Orbr-0109 OB09G15930.1 Oryza brachyantha 48 4e-154 543
WERAM-Aet-0048 EMT13865 Aegilops tauschii 45 6e-150 529
WERAM-Ori-0112 BGIOSGA030706-PA Oryza indica 47 8e-150 528
WERAM-Tra-0233 Traes_5DL_9DCF29857.2 Triticum aestivum 45 2e-149 527
WERAM-Orr-0107 ORUFI09G09860.1 Oryza rufipogon 47 2e-149 527
WERAM-Orm-0040 OMERI03G20080.1 Oryza meridionalis 41 4e-145 513
WERAM-Lep-0100 LPERR09G06290.1 Leersia perrieri 42 4e-142 503
WERAM-Orp-0097 OPUNC09G07740.1 Oryza punctata 44 7e-136 482
WERAM-Tru-0042 TRIUR3_19853-P1 Triticum urartu 46 2e-131 467
WERAM-Orb-0104 OBART09G09130.1 Oryza barthii 44 1e-129 461
WERAM-Orni-0101 ONIVA09G08110.1 Oryza nivara 43 4e-129 460
WERAM-Php-0022 PP1S144_17V6.1 Physcomitrella patens 39 6e-128 456
WERAM-Mua-0058 GSMUA_Achr3P14190_001 Musa acuminata 42 2e-124 444
WERAM-Brd-0103 BRADI4G27417.1 Brachypodium distachyon 43 5e-124 442
WERAM-Ors-0026 OS02T0828900-01 Oryza sativa 42 1e-121 435
WERAM-Amt-0068 ERN16983 Amborella trichopoda 35 4e-121 433
WERAM-Org-0029 ORGLA02G0333900.1 Oryza glaberrima 42 5e-120 429
WERAM-Hov-0012 MLOC_12624.1 Hordeum vulgare 41 2e-119 427
WERAM-Tar-0009 ENSTRUP00000002076.1 Takifugu rubripes 36 2e-53 208
WERAM-Asm-0165 ENSAMXP00000016507.1 Astyanax mexicanus 37 1e-52 206
WERAM-Gaa-0189 ENSGACP00000023958.1 Gasterosteus aculeatus 35 4e-52 204
WERAM-Orn-0157 ENSONIP00000016309.1 Oreochromis niloticus 36 1e-51 202
WERAM-Fec-0021 ENSFCAP00000001589.3 Felis catus 36 2e-51 202
WERAM-Ptv-0087 ENSPVAP00000007885.1 Pteropus vampyrus 36 2e-51 201
WERAM-Caf-0016 ENSCAFP00000001774.3 Canis familiaris 36 2e-51 201
WERAM-Dan-0091 ENSDNOP00000009144.3 Dasypus novemcinctus 36 2e-51 201
WERAM-Mup-0101 ENSMPUP00000009333.1 Mustela putorius furo 36 2e-51 201
WERAM-Gog-0012 ENSGGOP00000000822.2 Gorilla gorilla 36 2e-51 201
WERAM-Pat-0141 ENSPTRP00000029560.2 Pan troglodytes 36 2e-51 201
WERAM-Bot-0099 ENSBTAP00000013278.4 Bos taurus 36 2e-51 201
WERAM-Poa-0141 ENSPPYP00000017696.1 Pongo abelii 36 2e-51 201
WERAM-Chs-0157 ENSCSAP00000009298.1 Chlorocebus sabaeus 36 2e-51 201
WERAM-Sus-0108 ENSSSCP00000015245.2 Sus scrofa 36 3e-51 201
WERAM-Myl-0184 ENSMLUP00000015336.2 Myotis lucifugus 36 3e-51 201
WERAM-Hos-0102 ENSP00000326563.5 Homo sapiens 36 3e-51 201
WERAM-Orc-0080 ENSOCUP00000007280.2 Oryctolagus cuniculus 36 3e-51 201
WERAM-Ova-0174 ENSOARP00000017606.1 Ovis aries 36 3e-51 201
WERAM-Cap-0028 ENSCPOP00000002138.2 Cavia porcellus 36 3e-51 201
WERAM-Nol-0092 ENSNLEP00000010895.1 Nomascus leucogenys 36 3e-51 201
WERAM-Loa-0020 ENSLAFP00000001269.3 Loxodonta africana 36 3e-51 201
WERAM-Aim-0189 ENSAMEP00000017468.1 Ailuropoda melanoleuca 36 3e-51 201
WERAM-Eqc-0143 ENSECAP00000015928.1 Equus caballus 36 3e-51 201
WERAM-Mam-0003 ENSMMUP00000000618.2 Macaca mulatta 36 3e-51 201
WERAM-Otg-0093 ENSOGAP00000008081.2 Otolemur garnettii 36 3e-51 201
WERAM-Orla-0053 ENSORLP00000006841.1 Oryzias latipes 36 3e-51 201
WERAM-Mod-0100 ENSMODP00000015209.4 Monodelphis domestica 36 4e-51 201
WERAM-Mum-0157 ENSMUSP00000037628.7 Mus musculus 36 4e-51 201
WERAM-Lac-0170 ENSLACP00000020024.1 Latimeria chalumnae 35 4e-51 201
WERAM-Ten-0123 ENSTNIP00000013426.1 Tetraodon nigroviridis 36 4e-51 200
WERAM-Sah-0129 ENSSHAP00000013821.1 Sarcophilus harrisii 36 4e-51 200
WERAM-Paa-0043 ENSPANP00000002578.1 Papio anubis 36 4e-51 200
WERAM-Leo-0085 ENSLOCP00000011676.1 Lepisosteus oculatus 36 5e-51 200
WERAM-Ran-0218 ENSRNOP00000067649.2 Rattus norvegicus 36 5e-51 200
WERAM-Caj-0074 ENSCJAP00000012191.1 Callithrix jacchus 36 7e-51 199
WERAM-Meg-0102 ENSMGAP00000010078.1 Meleagris gallopavo 37 8e-51 199
WERAM-Tag-0001 ENSTGUP00000000018.1 Taeniopygia guttata 37 9e-51 199
WERAM-Gaga-0080 ENSGALP00000012399.4 Gallus gallus 37 9e-51 199
WERAM-Xet-0043 ENSXETP00000014664.3 Xenopus tropicalis 36 1e-50 199
WERAM-Gam-0008 ENSGMOP00000000972.1 Gadus morhua 35 1e-50 199
WERAM-Dar-0145 ENSDARP00000084278.5 Danio rerio 35 1e-50 199
WERAM-Fia-0049 ENSFALP00000003539.1 Ficedula albicollis 37 1e-50 199
WERAM-Anp-0111 ENSAPLP00000012780.1 Anas platyrhynchos 37 1e-50 199
WERAM-Mim-0018 ENSMICP00000001555.1 Microcebus murinus 36 1e-50 199
WERAM-Anc-0075 ENSACAP00000007027.2 Anolis carolinensis 35 2e-50 199
Created Date 25-Jun-2016