WERAM Information

Tag Content
WERAM ID WERAM-Viv-0053
Ensembl Protein ID VIT_08s0007g04490.t01
Gene Name VIT_08s0007g04490
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
VIT_08s0007g04490 VIT_08s0007g04490.t01 VIT_08s0007g04490.t01
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.30e-09 38.6 142 262
Organism Vitis vinifera
Domain Profile
  Me_Reader PHD
                PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                            ++C +C  d+ +   ++ Cd+C+++fH  C +lp  s+p++ +wyC+ C++
  VIT_08s0007g04490.t01 142 DLCSIC-GDGGN---LLLCDGCPRAFHRVCASLP--SIPQD-DWYCRYCQN 185
                            57****.55555...9******************..*****.*******85 PP
                PHD.txt   4 ClvCg.....kddegekemvqCde...Cddwf 27 
                            C++C+     k+++g ++++ Cd+     +wf
  VIT_08s0007g04490.t01 231 CVLCRgydfsKSGFGPRTIILCDQelpSGKWF 262
                            77774233333333333366666544433444 PP
Protein Sequence
(Fasta)		MKLVKRRYKY RFNFLLLKPI PVTKSSGSAL YNSSENKSLG KITKKDQRLH RLVFEEGGLP 60
DGTEVAYYAG GKKLLDGYKK GFGIFCWCCH CEVSASQFEA HAGWASRKKP YSYIYTSNGV 120
SLHELAISLS KGRKYSARDN DDLCSICGDG GNLLLCDGCP RAFHRVCASL PSIPQDDWYC 180
RYCQNMFQRE KFVEHNANAV AAGRVSGVDP IEQITKRCIR IVNPEAEVSA CVLCRGYDFS 240
KSGFGPRTII LCDQELPSGK WFCCLECIRI HSALQKLHVR GEEKLPDSLL NVIKEKHERK 300
GLESIADYNV RWRLLSGKLA SPETRVLLSE AVAIFHDRFD PIIDSVTGRD LIPAMVYGSH 360
VVSAGILRVF GQEVAELPLV ATSVDNQGRG YFQILFSCIE KLLAFLNVRS FVLPAAEEAE 420
CIWTKKFGFK KITPDQLSEY RKSFYQMISF QGTCMLEKGV PEWRRIIHQK
Nucleotide Sequence
(Fasta)		ATGAAGTTAG TTAAAAGACG TTATAAATAC CGTTTTAATT TCTTGTTGTT GAAACCAATT 60
CCAGTTACAA AGTCCTCTGG AAGTGCATTG TACAACTCCT CAGAAAATAA GAGTCTGGGG 120
AAGATAACAA AAAAAGATCA GAGGTTGCAC AGATTAGTTT TTGAGGAAGG CGGGTTACCT 180
GATGGAACTG AAGTTGCCTA CTATGCAGGC GGAAAGAAAT TGCTGGATGG TTATAAAAAA 240
GGCTTTGGAA TATTTTGTTG GTGCTGCCAC TGTGAGGTCA GTGCCTCACA GTTTGAAGCT 300
CATGCAGGTT GGGCCTCACG TAAAAAACCC TATTCATACA TTTACACATC AAATGGAGTG 360
TCACTACATG AATTGGCAAT TTCTCTATCA AAAGGCCGTA AATATTCTGC TAGGGATAAT 420
GACGACCTCT GCAGTATTTG TGGAGATGGT GGCAATCTTT TGCTTTGTGA TGGATGCCCT 480
AGGGCCTTTC ACAGAGTATG TGCATCTCTA CCAAGCATTC CCCAAGATGA CTGGTACTGT 540
CGATATTGCC AGAACATGTT CCAACGAGAA AAGTTTGTGG AGCATAACGC CAATGCTGTA 600
GCAGCTGGCA GGGTTTCAGG AGTGGATCCC ATAGAACAAA TAACCAAGCG ATGCATTCGT 660
ATTGTTAACC CAGAAGCTGA AGTTAGTGCA TGCGTGTTAT GCAGAGGTTA TGACTTCAGT 720
AAGTCAGGAT TTGGTCCACG CACGATTATA CTGTGTGACC AGGAATTACC CAGTGGGAAA 780
TGGTTTTGTT GCTTGGAATG CATAAGGATC CATTCCGCTT TGCAGAAGCT GCATGTTCGT 840
GGAGAGGAGA AGCTTCCAGA CTCTCTGCTG AATGTTATAA AGGAGAAGCA TGAGAGGAAA 900
GGTTTAGAAA GCATTGCTGA TTATAATGTA AGATGGAGGC TCCTTAGTGG CAAACTTGCT 960
TCTCCTGAAA CTAGGGTGTT GCTCTCTGAG GCCGTTGCTA TCTTCCATGA TCGCTTTGAC 1020
CCAATAATAG ATTCAGTGAC TGGACGTGAC CTTATTCCAG CCATGGTTTA TGGTTCACAT 1080
GTTGTTTCGG CTGGAATCCT TCGAGTGTTC GGACAGGAAG TGGCAGAGCT CCCTCTGGTT 1140
GCAACTAGTG TTGATAACCA AGGCAGGGGC TACTTTCAGA TATTGTTCTC CTGCATTGAA 1200
AAACTTCTGG CCTTTTTAAA TGTGCGGAGC TTTGTGCTTC CGGCTGCTGA AGAAGCAGAG 1260
TGTATATGGA CTAAGAAATT TGGCTTTAAG AAGATAACGC CAGACCAGCT TAGCGAGTAC 1320
AGGAAAAGCT TCTATCAGAT GATAAGCTTT CAAGGGACAT GTATGCTAGA AAAGGGGGTT 1380
CCTGAGTGGC GGAGGATTAT CCATCAAAAA TGAAAATATC AAAGTTGGTT ATGGTGTTAA 1440
TACAGAGCCT TAGTTAGACT TTAAAAAGAA GAGCCATGGT TATGGCAGCA GCATAATTTT 1500
TGATGAAAGA CGAGAAATAA GATTCAGCAA AGTATTATGA ACTCCATAAT GCTTTTCCTT 1560
GTTAGAGAGA TGTCAGACGA GATGATGGTC TTTAGTTTTT GGAAGATCAC AGGGATTTTG 1620
GTTTTGTGAA GGAGCGAGGG CTTTTTTGAT TGTGAATGAT TTTGGTCTTT TTGGATTTTT 1680
GTATAAAGTA TTAAATATTC AATGTCAGCA ATTTGGGCCT TTAGCTATTT CCTC 1735
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Prp-0031 EMJ05208 Prunus persica 71 1e-177 620
WERAM-Thc-0061 EOY08018 Theobroma cacao 67 3e-176 615
WERAM-Pot-0076 POPTR_0006s12180.1 Populus trichocarpa 68 1e-170 596
WERAM-Met-0159 AES81946 Medicago truncatula 67 5e-165 578
WERAM-Glm-0253 GLYMA19G37190.2 Glycine max 68 2e-163 573
WERAM-Sol-0128 Solyc10g083800.1.1 Solanum lycopersicum 64 9e-163 570
WERAM-Sot-0011 PGSC0003DMT400009967 Solanum tuberosum 64 4e-155 545
WERAM-Art-0054 AT2G36720.1 Arabidopsis thaliana 59 7e-144 508
WERAM-Arl-0074 fgenesh2_kg.4__ 1712__ AT2G36720.1 Arabidopsis lyrata 59 2e-143 506
WERAM-Bro-0084 Bo4g186380.1 Brassica oleracea 55 1e-139 493
WERAM-Brr-0090 Bra017226.1-P Brassica rapa 54 7e-138 488
WERAM-Mua-0153 GSMUA_AchrUn_randomP08820_001 Musa acuminata 57 5e-136 481
WERAM-Amt-0092 ERN04758 Amborella trichopoda 58 1e-130 464
WERAM-Orni-0068 ONIVA06G31450.1 Oryza nivara 56 3e-127 452
WERAM-Orb-0069 OBART06G28330.1 Oryza barthii 55 6e-127 451
WERAM-Org-0067 ORGLA06G0289000.1 Oryza glaberrima 55 2e-124 443
WERAM-Orr-0071 ORUFI06G30250.1 Oryza rufipogon 55 5e-124 442
WERAM-Orl-0030 KN538785.1_FGP006 Oryza longistaminata 55 7e-124 441
WERAM-Orgl-0067 OGLUM06G29720.1 Oryza glumaepatula 54 1e-122 437
WERAM-Sei-0021 Si005834m Setaria italica 53 3e-121 432
WERAM-Brd-0016 BRADI1G29167.1 Brachypodium distachyon 52 2e-119 426
WERAM-Tra-0282 Traes_7AL_153E1A74A.2 Triticum aestivum 53 5e-119 425
WERAM-Lep-0068 LPERR06G23780.2 Leersia perrieri 50 4e-118 422
WERAM-Sob-0140 Sb10g031300.1 Sorghum bicolor 51 2e-113 407
WERAM-Tru-0001 TRIUR3_00440-P1 Triticum urartu 50 9e-110 394
WERAM-Zem-0076 GRMZM2G134214_P01 Zea mays 48 3e-107 386
WERAM-Ors-0053 OS06T0101000-01 Oryza sativa 47 6e-106 382
WERAM-Orbr-0067 OB06G10140.1 Oryza brachyantha 47 2e-105 380
WERAM-Hov-0034 MLOC_36594.1 Hordeum vulgare 48 2e-104 376
WERAM-Orm-0055 OMERI06G00010.1 Oryza meridionalis 46 2e-103 373
WERAM-Orp-0055 OPUNC06G00070.1 Oryza punctata 48 4e-103 372
WERAM-Ori-0062 BGIOSGA020496-PA Oryza indica 56 6e-99 358
WERAM-Php-0109 PP1S50_31V6.1 Physcomitrella patens 38 3e-70 263
WERAM-Sem-0001 EFJ24916 Selaginella moellendorffii 26 4e-25 113
WERAM-Aet-0069 EMT23788 Aegilops tauschii 28 1e-22 105
Created Date 25-Jun-2016