WERAM Information

Tag Content
WERAM ID WERAM-Viv-0024
Ensembl Protein ID VIT_05s0020g03420.t01
Gene Name VIT_05s0020g03420
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
VIT_05s0020g03420 VIT_05s0020g03420.t01 VIT_05s0020g03420.t01
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 9.20e-11 42.3 668 748
Organism Vitis vinifera
Domain Profile
  Me_Reader PHD
                PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                            ++C +C  d+ +   +++Cd+C+  fH++C++++   lp+g +w+Cp+C+
  VIT_05s0020g03420.t01 668 DTCGIC-GDGGD---LICCDGCPSTFHQSCLNIQ--MLPSG-DWHCPNCT 710
                            58****.44444...9******************..*****.*******8 PP
                PHD.txt   4 ClvCg.kddegeke.......mvqCdeCddwfHlkCvkl 34 
                            C +Cg  d+ +  e       +v C+ C++ +H++C++ 
  VIT_05s0020g03420.t01 711 CKFCGmADGSN-AEddttvseLVTCSLCEKKYHTSCIQG 748
                            99997433333.223566788***************975 PP
Protein Sequence
(Fasta)		MEEGMRSGDR SGGLVKSRNA SGCLIIKKKG DGVSGAGSSG SQGLLESKKE KKRPRLVLSD 60
SGSSDELLES RRPRVLSGSS QAGNGVTVFK QGVEERNFGC NGVVERKRSR LDVFEFDEYD 120
RIEGKKQRKK EQMDNGEVGG RGFLGSKQVL QSSSRREFET GSSRQDIVYR RKHSYFGNTS 180
GSLGERNRGT DYSETSRFEM KRDGTRVPVS LLRGHSDEPI RLQGKNGVLK VMPKKKNVGG 240
SLRSYDPQEA EGIRQVSRPV DSMKRNILIR PSSYSETKLH EKPGSFVGAE KKHPNLRKSL 300
PTKKSKASYS GSEDSDTSLK VGSKSVEAHS SGKRGKSEGE RTPPSEKLPP TKGKEGKVKR 360
GSGTEKQLLR ERIRGMLVNA GWTIDYRPRR NRDYLDAVYI NPTGTAYWSI IKAYDALQKQ 420
IDDEESKSKP SGDLSPFSPI ADEVLSKLTR QTRKKIEKEM KRKQKDHAGT KNTDAYTKDD 480
SEDADDIKHE EKLSSFIKQN GKSIKRTLRH DRGEKLSFAS NSLVHGRKSR KIGRCTLLVR 540
NSGKGLNLET DGFVPYTGKR TLLSWLIDSG TVQLSEKVQY MNRRRTKVML EGWITRDGIH 600
CRCCSKILTV SKFEIHAGSK LRQPFQNIVL DSGVSLLQCQ VDAWNRQEES ERSGFHPIDV 660
DGDDPNDDTC GICGDGGDLI CCDGCPSTFH QSCLNIQMLP SGDWHCPNCT CKFCGMADGS 720
NAEDDTTVSE LVTCSLCEKK YHTSCIQGVD AVLSDTNNPS TSFCGQGCRE LFEHLQKFIG 780
VKQELEAGFS WSLIHRTDPG SDTSVRGFPQ RVESNSKLAI ALTVMDECFL SIVDRRSEIN 840
LIHNVLYNRG SNFNRLNYSG FYTAILERGD EIICAASIRI HGTQLAEMPF IGTRHIYRRQ 900
GMCRRLFCAI ESALCSLKVE MLIIPAISEL MHTWTVGFGF NPLEESHKQE LRSLNMLVFP 960
GTDMLQKLLL EQETADGNMT ASPGTKSVES KGNNCNTPDL ENKSDIDSSN GHDLSIHNHS 1020
ISQHSNDRND NVCASDSISL TPAVPLTNPS IMSGASDALH EPEIQGSGEE TRCSNSESGD 1080
KLNEATEAKC PSPSYASCNV LEIEKHVFDS PGEGDMHSPS EDKVGDARDP NVQVPGEGTI 1140
CSSSQSRNKL GKPGSDFNCL SASEASHNGK AMVDSPVESN SRPSDECEDG NGLEVNAEAP 1200
GEGTICSNSQ PSYKLPVSTT GMDFLPASEV SHGILEVEKL VSDSLVEGNV LSCAEGEAGD 1260
AHEVNTQVSG NGITGSNSCF KDKVAEPPSD VKPLSPSDES FNIEFKKPVL ASPVEVNIQS 1320
STKGEVDDAH EVGDSVASVE PVSSEISAQK ITEEVDKNQK PLPVSTFDGT DESTIQSNSN 1380
FNNQSAFEME GKSHVALEVA SNANDYEENR LKVSAENSGT DECEGKAGSI SV 1432
Nucleotide Sequence
(Fasta)		GGAATGGCAT TGGGTATTTA TATAGGGCTC AAATATAATT GAGTTGTATA ATTTCTCTCT 60
CTTCCTCTGC AAAATTGGGT TTCTCTCTTC GATCTCTGAT CAGCTCCCTT CGCCGGAAAA 120
TCTCGACGCC GATCGAGGGA TCGCGACGAT TCATCGGTGG TTACGGAATC GCGTAGCTTT 180
CCGGGGAGAT CTGGTAGTGT TTGGCTTGGG ATTTTGATTT TGGGTTTCTG CTTCGGTTTT 240
GTTGGTTTTG GTGGCGTGTT TGAGATGAAA TTGAAGGAAA GCTTTGAAAT TTAGGGCTTT 300
TTGGGGTTAT TGCTGTATAT GGAAGAGGGA ATGAGAAGTG GTGATCGTTC GGGCGGTTTG 360
GTGAAGAGTA GGAACGCCTC AGGATGTTTA ATTATTAAAA AGAAAGGCGA TGGGGTGAGT 420
GGGGCTGGTT CTTCGGGTTC GCAGGGGTTA TTAGAATCCA AGAAGGAGAA GAAGAGACCG 480
CGATTGGTTC TTAGCGATTC GGGTTCGAGT GATGAACTGT TAGAATCTCG TCGGCCAAGG 540
GTTCTATCTG GGAGTAGCCA AGCTGGTAAT GGTGTAACTG TTTTTAAACA GGGCGTTGAA 600
GAGAGAAATT TTGGTTGCAA TGGTGTAGTC GAGAGAAAGA GAAGTAGGTT AGATGTCTTT 660
GAGTTTGACG AGTATGACAG AATTGAGGGG AAAAAGCAGA GGAAGAAGGA ACAGATGGAT 720
AATGGGGAAG TTGGAGGAAG AGGCTTTTTG GGTTCAAAGC AGGTGCTGCA AAGTAGCAGT 780
CGAAGGGAAT TTGAGACAGG TTCAAGCAGA CAAGATATTG TGTATAGGAG AAAACATTCT 840
TATTTTGGAA ATACAAGTGG CTCATTAGGA GAAAGGAACA GGGGAACTGA TTATTCTGAG 900
ACTAGCAGGT TTGAGATGAA AAGGGATGGA ACTCGGGTAC CAGTTTCGTT GTTGAGGGGT 960
CACTCTGATG AACCCATCCG ACTGCAGGGA AAAAATGGTG TTTTGAAGGT GATGCCAAAG 1020
AAGAAGAATG TGGGAGGGTC TCTCAGAAGT TATGATCCCC AGGAAGCTGA AGGCATTAGA 1080
CAGGTGTCTA GGCCTGTGGA TAGCATGAAG AGGAACATAT TGATTCGCCC TTCATCTTAT 1140
TCAGAAACAA AACTTCATGA GAAACCAGGT TCATTTGTTG GAGCAGAGAA AAAACACCCG 1200
AACTTGAGAA AATCATTACC CACTAAGAAG AGTAAAGCCA GCTACTCAGG ATCAGAGGAC 1260
AGTGACACAT CATTGAAGGT GGGTTCAAAG AGTGTGGAAG CCCATAGCTC TGGGAAAAGG 1320
GGAAAGAGTG AAGGAGAGAG GACTCCACCG TCCGAAAAGC TCCCACCAAC TAAAGGAAAG 1380
GAAGGAAAAG TTAAGCGTGG TAGTGGCACC GAGAAGCAAT TATTACGTGA ACGAATAAGG 1440
GGAATGCTTG TTAATGCAGG TTGGACAATC GATTATAGAC CTAGAAGGAA TAGAGACTAC 1500
CTAGACGCTG TTTACATTAA CCCCACAGGA ACAGCGTACT GGTCCATCAT CAAGGCTTAT 1560
GATGCTCTCC AAAAGCAAAT TGATGATGAG GAGAGTAAAT CAAAACCTAG TGGTGACCTC 1620
TCTCCCTTTT CTCCCATAGC AGATGAGGTA CTCAGCAAAC TGACAAGGCA AACTCGTAAG 1680
AAGATTGAGA AAGAAATGAA AAGGAAACAA AAGGATCATG CTGGTACTAA GAATACAGAT 1740
GCATATACCA AGGATGACTC AGAGGATGCA GATGACATTA AGCATGAAGA GAAACTAAGC 1800
TCATTCATAA AGCAGAATGG CAAGTCGATT AAACGAACAT TAAGGCACGA TCGGGGTGAA 1860
AAACTATCTT TTGCTTCCAA TTCTTTGGTA CATGGAAGGA AAAGTAGAAA AATTGGCAGA 1920
TGTACTTTGT TGGTTCGCAA TTCTGGCAAG GGACTGAATT TGGAAACTGA TGGCTTTGTT 1980
CCATATACTG GGAAACGAAC TCTTCTGTCT TGGCTTATTG ACTCTGGAAC TGTGCAGTTA 2040
AGTGAGAAAG TGCAGTATAT GAATCGCAGA CGCACAAAAG TAATGCTGGA GGGATGGATC 2100
ACAAGAGATG GAATTCATTG TAGATGCTGT AGTAAAATCC TCACAGTTTC AAAGTTTGAA 2160
ATTCATGCAG GGAGCAAACT TCGTCAGCCA TTCCAGAACA TAGTTTTGGA CTCTGGGGTT 2220
TCCCTTTTGC AGTGCCAGGT AGATGCATGG AATAGACAAG AGGAGTCTGA ACGTAGTGGT 2280
TTCCACCCTA TAGATGTTGA TGGTGATGAT CCTAATGATG ACACTTGTGG TATCTGTGGA 2340
GATGGTGGGG ATTTGATCTG TTGTGATGGG TGTCCCTCAA CATTCCATCA GAGCTGCTTA 2400
AATATTCAGA TGCTTCCATC TGGTGACTGG CACTGCCCTA ATTGCACATG CAAATTTTGC 2460
GGAATGGCTG ATGGGAGTAA TGCTGAAGAT GATACAACCG TCAGTGAGCT AGTTACTTGC 2520
AGTCTATGTG AGAAAAAATA TCACACATCG TGCATTCAAG GGGTGGATGC TGTCCTTTCC 2580
GATACCAATA ATCCATCCAC TTCTTTCTGT GGACAGGGGT GCCGGGAGCT CTTTGAACAT 2640
TTACAGAAGT TTATTGGGGT CAAACAAGAA CTGGAGGCAG GGTTTTCATG GTCTCTCATT 2700
CATCGCACAG ACCCAGGCTC AGATACATCT GTCCGAGGAT TTCCACAAAG GGTGGAAAGC 2760
AATTCTAAGC TTGCTATTGC ACTGACTGTT ATGGATGAGT GCTTTTTGTC CATTGTTGAC 2820
AGGAGGAGCG AGATTAATTT AATCCATAAT GTTCTCTATA ATCGTGGATC AAACTTTAAT 2880
CGGCTGAACT ACAGTGGTTT CTACACTGCA ATTTTGGAGA GAGGTGATGA AATAATCTGT 2940
GCTGCATCAA TCAGGATCCA TGGAACCCAG TTAGCAGAGA TGCCGTTCAT TGGAACTCGC 3000
CATATATATA GGCGCCAAGG GATGTGCCGT CGGCTTTTTT GTGCTATTGA ATCGGCTCTT 3060
TGCTCTCTCA AAGTTGAGAT GCTAATTATT CCAGCTATAT CCGAACTCAT GCATACATGG 3120
ACTGTAGGTT TTGGTTTCAA TCCTCTTGAA GAATCCCATA AGCAAGAATT GAGGTCCTTG 3180
AATATGTTGG TGTTCCCGGG TACAGACATG TTACAGAAGC TGCTTCTGGA GCAAGAAACT 3240
GCTGATGGAA ACATGACTGC TAGTCCAGGT ACAAAGTCAG TTGAATCCAA AGGCAACAAT 3300
TGTAATACAC CTGATTTGGA AAATAAATCT GATATAGATT CATCCAATGG GCATGATTTA 3360
TCCATCCATA ATCATTCCAT TTCGCAACAT TCAAATGACA GAAATGACAA TGTCTGTGCT 3420
TCTGACTCTA TTTCCCTGAC CCCAGCTGTT CCATTGACTA ATCCTTCTAT CATGAGTGGT 3480
GCTTCAGATG CTCTTCATGA ACCTGAAATC CAAGGCTCTG GTGAGGAGAC GAGATGTTCT 3540
AATTCTGAGT CCGGGGACAA GTTGAATGAA GCTACTGAAG CCAAGTGTCC TTCTCCCTCT 3600
TATGCAAGTT GCAATGTTCT TGAGATAGAA AAACATGTAT TTGATTCTCC TGGCGAGGGT 3660
GATATGCATT CTCCTTCTGA GGACAAAGTC GGTGATGCTC GTGACCCAAA TGTCCAAGTC 3720
CCTGGTGAGG GGACTATATG TTCTAGTTCT CAGTCAAGGA ACAAACTAGG CAAACCTGGT 3780
AGTGACTTCA ACTGTCTATC TGCTTCTGAA GCAAGTCATA ATGGAAAAGC CATGGTGGAT 3840
TCTCCTGTTG AAAGTAACAG TCGGCCCTCT GATGAGTGTG AAGATGGTAA TGGTCTAGAA 3900
GTAAATGCTG AAGCCCCTGG TGAGGGGACC ATTTGTTCTA ACTCTCAGCC AAGTTACAAA 3960
TTACCTGTAT CTACTACAGG TATGGACTTT CTCCCTGCTT CTGAAGTGAG TCATGGCATC 4020
CTTGAGGTGG AAAAGCTAGT ATCAGATTCT CTAGTTGAAG GAAATGTTCT GTCTTGTGCA 4080
GAGGGTGAAG CAGGTGATGC TCATGAAGTA AATACCCAGG TCTCTGGTAA TGGGATTACA 4140
GGTTCTAATT CTTGCTTCAA GGACAAAGTA GCTGAACCTC CTAGTGATGT GAAGCCCCTC 4200
TCTCCCTCTG ATGAGAGTTT CAATATCGAG TTCAAAAAAC CTGTATTGGC TTCTCCTGTA 4260
GAGGTCAATA TTCAGTCTTC CACCAAGGGT GAAGTAGATG ATGCTCATGA AGTAGGTGAT 4320
TCAGTTGCTT CTGTTGAACC TGTTTCAAGT GAAATTTCTG CTCAGAAAAT AACTGAGGAA 4380
GTTGATAAAA ATCAAAAACC TCTTCCTGTT TCTACTTTTG ATGGTACTGA TGAGAGTACT 4440
ATACAGTCCA ACTCCAATTT TAATAATCAG AGTGCATTTG AGATGGAAGG TAAATCACAT 4500
GTGGCTTTGG AAGTTGCCTC TAATGCAAAT GATTATGAAG AAAACCGGCT AAAGGTATCT 4560
GCTGAAAATT CAGGAACTGA TGAGTGTGAA GGGAAAGCTG GATCTATTAG TGTTTAAAAT 4620
GATGCCAATG CCTCATGTTG AGGCTGTAGC AGTTCTACTG ACTTGGATTT AACAATGCTG 4680
GAATGGTTTT TTTGGTAGAG GGCTCTGGTG CAGATGTGTT CCTTGACTGA GATGGCACTA 4740
AGGCACTTTC AGGATTTGGA GATAAACATC ACCCCATGCA ACTTGTGAGT CAAGTCTGCT 4800
GCATGCTATG ATTATCATTT TTCCATCAAT TTCCAAAAGA TGTTCTTGAT GCAAATGGGA 4860
ATGGGTCAAT TTTTATGTCA AAAGTAAAGT TCCTACCATA TAACACCATC CTTCAAGGTT 4920
GGGCTGGTTA TTTTGCAAAT GCTGATTTTG TTGGTGAAAA CTGTCATGCA GCTTCCAAGT 4980
GTATATATCT GGATCTGCTG AGTTTGCAAG GTCTGATTTT ATCTGGATAT CCTGTAATCT 5040
TCATTTGATG TTAGTAATTC TGCTCTCGAC ACAACAGAGG TGGATTAAGA TGATTCTTGA 5100
GCAGCTCCTT CTTGCGATTA TATCATTCCT ATTTGTGGAG CAGTGTTGAT GATACACATT 5160
GGACACAAGT TCTGTTGCCT TGGTTTTTCT TGGTTGTCTA AAATTTTTGT GGTACAATTG 5220
TATATCATTT TCTTGATCCT TCTAAAGGAG TGTAACTTCT GGGCTTCTCA TAGGCCTTGT 5280
AATTTCAACT TGCTGCCTAA GTCCCCAGAA CTCAGGTCCA ATTGAGCATC CACCTCTGTG 5340
TCATTTAGTT TTTGTTTAAG CACCTCTAGG TTGGTCTGGC CACTCATAAT TGTTTAGATG 5400
TTTTTGAGGC AGTAATAAAC TCAAACATGC CATTTATGTA ATGCCAAGCT ATTATTCTCA 5460
GGAGATGTTG TAGGCAATTA TTAGTTAAAG CTATCTTATA TTTCATTACA TAGATAGA 5519
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Thc-0054 EOY05682 Theobroma cacao 55 0.0 1184
WERAM-Prp-0110 EMJ25684 Prunus persica 58 0.0 1133
WERAM-Glm-0010 GLYMA01G44870.1 Glycine max 51 0.0 1026
WERAM-Met-0033 KEH43887 Medicago truncatula 51 0.0 983
WERAM-Sol-0114 Solyc09g076010.2.1 Solanum lycopersicum 52 0.0 898
WERAM-Pot-0115 POPTR_0010s09810.1 Populus trichocarpa 57 0.0 816
WERAM-Art-0101 AT4G14920.1 Arabidopsis thaliana 48 0.0 792
WERAM-Bro-0088 Bo5g005570.1 Brassica oleracea 48 0.0 730
WERAM-Mua-0076 GSMUA_Achr4P21300_001 Musa acuminata 49 9e-173 605
WERAM-Org-0072 ORGLA07G0040300.1 Oryza glaberrima 47 4e-153 540
WERAM-Orni-0071 ONIVA07G03330.1 Oryza nivara 47 6e-153 540
WERAM-Orgl-0070 OGLUM07G04140.1 Oryza glumaepatula 47 6e-153 540
WERAM-Orr-0074 ORUFI07G04440.1 Oryza rufipogon 47 9e-153 539
WERAM-Orm-0068 OMERI07G03260.1 Oryza meridionalis 47 1e-152 538
WERAM-Orl-0111 KN542919.1_FGP001 Oryza longistaminata 47 2e-152 537
WERAM-Ori-0082 BGIOSGA025231-PA Oryza indica 46 1e-151 535
WERAM-Orp-0069 OPUNC07G04530.3 Oryza punctata 46 5e-150 530
WERAM-Orbr-0080 OB07G13580.1 Oryza brachyantha 45 4e-148 523
WERAM-Lep-0071 LPERR07G04130.1 Leersia perrieri 45 4e-147 520
WERAM-Tra-0234 Traes_5DL_9FA4818AF.2 Triticum aestivum 46 5e-147 520
WERAM-Tru-0097 TRIUR3_33650-P1 Triticum urartu 46 9e-144 509
WERAM-Brr-0108 Bra020653.1-P Brassica rapa 66 1e-142 505
WERAM-Aet-0042 EMT29012 Aegilops tauschii 45 2e-142 505
WERAM-Sob-0017 Sb02g004100.1 Sorghum bicolor 42 9e-142 502
WERAM-Sei-0098 Si028686m Setaria italica 39 2e-138 491
WERAM-Zem-0135 GRMZM2G412492_P01 Zea mays 43 2e-118 425
WERAM-Amt-0036 ERN16161 Amborella trichopoda 49 2e-111 402
WERAM-Brd-0130 BRADI5G27517.1 Brachypodium distachyon 44 1e-100 366
WERAM-Hov-0069 MLOC_5844.1 Hordeum vulgare 43 4e-100 364
WERAM-Orb-0048 OBART04G30730.1 Oryza barthii 42 3e-90 331
WERAM-Arl-0059 fgenesh2_kg.3__ 1623__ AT3G14980.1 Arabidopsis lyrata 42 4e-86 317
WERAM-Sem-0001 EFJ24916 Selaginella moellendorffii 44 1e-83 309
WERAM-Sot-0081 PGSC0003DMT400067527 Solanum tuberosum 41 3e-83 308
WERAM-Php-0118 PP1S59_348V6.1 Physcomitrella patens 35 1e-81 302
WERAM-Ors-0046 OS04T0691700-01 Oryza sativa 44 5e-75 280
Created Date 25-Jun-2016